Requirement of a Membrane Potential for the Posttranslational Transfer of Proteins into Mitochondsria

Posttranslational transfer of most precursor proteins into mitochondria is dependent on energization of the mitochondria. Experiments were carried out to determine whether the membrane potential or the intramitochondrial ATP is the immediate energy source. Transfer in vitro of precursors to the ADP/ATP carrier and to ATPase subunit 9 into isolated Neurospora mitochondria was investigated. Under conditions where the level of intramitochondrial ATP was high and the membrane potential was dissipated, import and processing of these precursor proteins did not take place. On the other hand, precursors were taken up and processed when the intramitochondrial ATP level was low, but the membrane potential was not dissipated. We conclude that a membrane potential is involved in the import of those mitochondrial precursor proteins which require energy for intracellular translocatio

Cryptic species in a well-known habitat: applying taxonomics to the amphipod genus Epimeria (Crustacea, Peracarida)

Taxonomy plays a central role in biological sciences. It provides a communication system for scientists as it aims to enable correct identification of the studied organisms. As a consequence, species descriptions should seek to include as much available information as possible at species level to follow an integrative concept of ‘taxonomics’. Here, we describe the cryptic species Epimeria frankei sp. nov. from the North Sea, and also redescribe its sister species, Epimeria cornigera. The morphological information obtained is substantiated by DNA barcodes and complete nuclear 18S rRNA gene sequences. In addition, we provide, for the first time, full mitochondrial genome data as part of a metazoan species description for a holotype, as well as the neotype. This study represents the first successful implementation of the recently proposed concept of taxonomics, using data from highthroughput technologies for integrative taxonomic studies, allowing the highest level of confidence for both biodiversity and ecological research

DNA-SEQUENCE DETERMINATION AND FUNCTIONAL-CHARACTERIZATION OF THE OCT-PLASMID-ENCODED ALKJKL GENES OF PSEUDOMONAS-OLEOVORANS

The alkBFGHJKL and alkST operons encode enzymes that allow Pseudomonas putida (oleovorans) to metabolize alkanes. In this paper we report the nucleotide sequence of a 4592 bp region of the alkBFGHJKL operon encoding the AlkJ, AlkK and AlkL polypeptides. The alkJ gene encodes a protein of 59 kilodaltons. The predicted amino acid sequence shows significant homology with four flavin proteins: choline dehydrogenase, a glucose dehydrogenase and two oxidases. AlkJ is membrane-bound and converts aliphatic medium-chain-length alcohols into aldehydes. The properties of AlkJ suggest that it is linked to the electron transfer chain. AlkJ is necessary for growth on alkanes only in P. putida alcohol dehydrogenase (AlcA) mutants. AlkK is homologous to a range of proteins which act by an ATP-dependent covalent binding of AMP to their substrate. This list includes the acetate, coumarate and long-chain fatty acid CoA ligases. The alkK gene complements a fadD mutation in Escherichia coli, which shows that it indeed encodes an acyl-CoA synthetase. AlkK is a 60 kilodalton protein located in the cytoplasm. AlkL is homologous to OmpW, a Vibrio cholerae outer membrane protein of unknown function, and a hypothetical polypeptide encoded by ytt4 in E. coli. AlkL, OmpW and Ytt4 all have a signal peptide and end with a sequence characteristic of outer membrane proteins. The alkL gene product was found in the outer membrane of E. coli W3110 containing the alk-genes. The alkL gene can be deleted without a clear effect on growth rate. Its function remains unknown. The G+C content of the alkJKL genes is 45%, identical to that of the alkBFGH genes, and significantly lower than the G+C content of the OCT-plasmid and the P. putida chromosome

A comparative study on the tubes and feeding behaviour of eight species of corophioid Amphipoda and their bearing on phylogenetic relationships within the Corophioidea

Observations are presented on mouthpart functional morphology, and on feeding, grooming and defaecatory behaviour of eight species of corophioid Amphipoda, viz. Corophium bonnellii, Lembos websteri, Aora gracilis, A. spinicornis, Gammaropsis nitida, Ericthonius punctatus, Jassa falcata and J. marmorata. These data are considered in relation to tube structure and amphipod posture in relation to the tube. All these species occupy double-ended cylindreical tubes made from 'amphipod silk' secreted by the third and fourth preraeopods, incorporating sediment and other debris to varying degrees. Uniquely among this set of species, however, E. punctatus has a tube that is architecturally distinct. It tapers along its length and has a distinctive oblique main entrance at its widest end. This end is used preferentially. The other species studied use either opening with equal facility. Such a feature is adaptive in facilitating deployment of the antennae and shielding the head of E. punctatus. Two groupings of species are propose: group A which feed inside their tube using pleopod-induced through-tube currents, and group B which feed outside or at the entrance to their tube using external water currents. Group A includes C. bonnellii, L. websteri and the Aora species. Group B includes E. punctatus and the Jassa species. Gammaropsis nitida exhibits traits from both groups, adding weight to its perceived status as a genus representative of the stem corophioid. The ischyrocerid habit of externalizing food-gathering may be regarded as the first step along an evolutionary line leading to the rod-building podocerid types and ultimately towards the caprellids. All species examined show a degree of flexibility in their feeding habits which helps to explain the success of this taxon, which has radiated into a great diversity of aquatic biotopes