Phylogenetic characterization of two echinoid species of the southeastern Mediterranean, off Egypt

AbstractIn this study we investigated the phylogenetics of two sea urchin species, Arbacia lixula and Paracentrotus lividus from the Mediterranean Sea. Specimens were collected from the east coast of Alexandria City, Egypt. Pigmentation examination showed four sympatric color morphotypes (black, purple, reddish brown, and olive green). Mitochondrial DNA was extracted from specimens and mitochondrial cytochrome oxidase subunit I (COI) and 16S ribosomal RNA (16S) were sequenced. The results showed that all black specimens constituted the species A. lixula. All other colors belonged to P. lividus, with no apparent differentiation between color morphotypes. Moreover, P. lividus showed high haplotype diversity (COI; H=0.9500 and 16S; H=0.8580) and low values of nucleotide diversity (COI; π=0.0075 and 16S; π=0.0049), indicating a high degree of polymorphism within this species. This study represents the first attempt at DNA barcoding of echinoid species in the southeast Mediterranean off the Egyptian coast, and will provide a base for future phylogenetic analyses

Abundance, size composition and benthic assemblages of two Mediterranean echinoids off the

This study is concerned with the variability in abundance, size composition and benthic assemblages of two echinoid species, the common sea urchin Paracentrotus lividus (Lamarck, 1816) and black urchin Arbacia lixula (Linnaeus, 1758) in the Southeastern Mediterranean (SEM) along the coast of Alexandria, Egypt. Four seasonal trips were made during the years 2014–2015 covering 55 km of the shore with depths ranging between 3 and 9 m. The sea urchin species composition, density and size structure and distribution were compared. The associated macrobenthic invertebrates with prominent presence and biomass were observed as well as other benthic fauna and flora associations. The present results showed that P. lividus was the dominant echinoid spatially and temporally. A. lixula showed frequent occurrence in Sidi Bishr and Sidi Gaber stations in the spring season. The most dominant size class was the medium to large-sized classes for P. lividus and large-sized classes for A. lixula. The commercial size for the edible P. lividus represented 33% of the sampled population. Furthermore, the most dominant macrobenthic assemblages beside the echinoid population were primarily oysters, sea cucumbers, and mussels. Beside these, assemblage of seaweeds (red, green, brown and crustose algae), Porifera, Cnidaria, Crustacea, other Echinodermata, Bivalvia, Gastropoda, Tunicata, Bryozoa and Annelida were found. The present study shows that the investigated area represents stable habitats for the echinoid population with rich and diversified algal assemblages as well as other potential food resources