16 research outputs found
A sharp-front moving boundary model for malignant invasion
We analyse a novel mathematical model of malignant invasion which takes the
form of a two-phase moving boundary problem describing the invasion of a
population of malignant cells into a population of background tissue, such as
skin. Cells in both populations undergo diffusive migration and logistic
proliferation. The interface between the two populations moves according to a
two-phase Stefan condition. Unlike many reaction-diffusion models of malignant
invasion, the moving boundary model explicitly describes the motion of the
sharp front between the cancer and surrounding tissues without needing to
introduce degenerate nonlinear diffusion. Numerical simulations suggest the
model gives rise to very interesting travelling wave solutions that move with
speed , and the model supports both malignant invasion and malignant
retreat, where the travelling wave can move in either the positive or negative
-directions. Unlike the well-studied Fisher-Kolmogorov and Porous-Fisher
models where travelling waves move with a minimum wave speed ,
the moving boundary model leads to travelling wave solutions with . We interpret these travelling wave solutions in the phase plane and
show that they are associated with several features of the classical
Fisher-Kolmogorov phase plane that are often disregarded as being nonphysical.
We show, numerically, that the phase plane analysis compares well with long
time solutions from the full partial differential equation model as well as
providing accurate perturbation approximations for the shape of the travelling
waves.Comment: 48 pages, 21 figure
Invading and receding sharp-fronted travelling waves
Biological invasion, whereby populations of motile and proliferative
individuals lead to moving fronts that invade into vacant regions, are
routinely studied using partial differential equation (PDE) models based upon
the classical Fisher--KPP model. While the Fisher--KPP model and extensions
have been successfully used to model a range of invasive phenomena, including
ecological and cellular invasion, an often--overlooked limitation of the
Fisher--KPP model is that it cannot be used to model biological recession where
the spatial extent of the population decreases with time. In this work we study
the \textit{Fisher--Stefan} model, which is a generalisation of the Fisher--KPP
model obtained by reformulating the Fisher--KPP model as a moving boundary
problem. The nondimensional Fisher--Stefan model involves just one single
parameter, , which relates the shape of the density front at the moving
boundary to the speed of the associated travelling wave, . Using numerical
simulation, phase plane and perturbation analysis, we construct approximate
solutions of the Fisher--Stefan model for both slowly invading and slowly
receding travelling waves, as well as for rapidly receding travelling waves.
These approximations allow us to determine the relationship between and
so that commonly--reported experimental estimates of can be used
to provide estimates of the unknown parameter . Interestingly, when we
reinterpret the Fisher--KPP model as a moving boundary problem, many
disregarded features of the classical Fisher--KPP phase plane take on a new
interpretation since travelling waves solutions with are not normally
considered. This means that our analysis of the Fisher--Stefan model has both
practical value and an inherent mathematical value.Comment: 47 pages, 13 figure
Exact sharp-fronted travelling wave solutions of the Fisher-KPP equation
A family of travelling wave solutions to the Fisher-KPP equation with speeds
can be expressed exactly using Weierstrass elliptic
functions. The well-known solution for , which decays to zero in
the far-field, is exceptional in the sense that it can be written simply in
terms of an exponential function. This solution has the property that the
phase-plane trajectory is a heteroclinic orbit beginning at a saddle point and
ends at the origin. For , there is also a trajectory that begins
at the saddle point, but this solution is normally disregarded as being
unphysical as it blows up for finite . We reinterpret this special
trajectory as an exact sharp-fronted travelling solution to a
\textit{Fisher-Stefan} type moving boundary problem, where the population is
receding from, instead of advancing into, an empty space. By simulating the
full moving boundary problem numerically, we demonstrate how time-dependent
solutions evolve to this exact travelling solution for large time. The
relevance of such receding travelling waves to mathematical models for cell
migration and cell proliferation is also discussed
Mathematical models of biological invasion
This thesis studies mathematical models of a population of cells invading the surrounding environment or another living population. A classical single-species model is reformulated using a moving boundary to track the position of the moving front of the invading population. The moving boundary is also used to separate two populations. Other models studied are coupled partial differential equations to describe the interaction of a population with another one. Different types of interaction are represented: the degradation of healthy skin by cancer and the growth of bone tissue on substrate
Non-vanishing sharp-fronted travelling wave solutions of the Fisher-Kolmogorov model
The Fisher-Kolmogorov-Petrovsky-Piskunov (KPP) model, and generalizations thereof, involves simple reaction-diffusion equations for biological invasion that assume individuals in the population undergo linear diffusion with diffusivity D, and logistic proliferation with rate λ. For the Fisher-KPP model, biologically relevant initial conditions lead to long-time travelling wave solutions that move with speed c=2√λD. Despite these attractive features, there are several biological limitations of travelling wave solutions of the Fisher-KPP model. First, these travelling wave solutions do not predict a well-defined invasion front. Second, biologically relevant initial conditions lead to travelling waves that move with speed c=2√λD > 0. This means that, for biologically relevant initial data, the Fisher-KPP model cannot be used to study invasion with c ≠2√λD, or retreating travelling waves with c < 0. Here, we reformulate the Fisher-KPP model as a moving boundary problem and show that this reformulated model alleviates the key limitations of the Fisher-KPP model. Travelling wave solutions of the moving boundary problem predict a well-defined front that can propagate with any wave speed, -∞ < c < ∞. Here, we establish these results using a combination of high-accuracy numerical simulations of the time-dependent partial differential equation, phase plane analysis and perturbation methods. All software required to replicate this work is available on GitHub.</p
Travelling wave analysis of cellular invasion into surrounding tissues
Single-species reaction–diffusion equations, such as the Fisher–KPP and Porous-Fisher equations, support travelling wave solutions that are often interpreted as simple mathematical models of biological invasion. Such travelling wave solutions are thought to play a role in various applications including development, wound healing and malignant invasion. One criticism of these single-species equations is that they do not explicitly describe interactions between the invading population and the surrounding environment. In this work we study a reaction–diffusion equation that describes malignant invasion which has been used to interpret experimental measurements describing the invasion of malignant melanoma cells into surrounding human skin tissues Browning et al. (2019). This model explicitly describes how the population of cancer cells degrade the surrounding tissues, thereby creating free space into which the cancer cells migrate and proliferate to form an invasion wave of malignant tissue that is coupled to a retreating wave of skin tissue. We analyse travelling wave solutions of this model using a combination of numerical simulation, phase plane analysis and perturbation techniques. Our analysis shows that the travelling wave solutions involve a range of very interesting properties that resemble certain well-established features of both the Fisher–KPP and Porous-Fisher equations, as well as a range of novel properties that can be thought of as extensions of these well-studied single-species equations. Matlab software to implement all calculations is available at GitHub.</p
Traveling waves, blow-up, and extinction in the Fisher–Stefan model
While there is a long history of employing moving boundary problems in physics, in particular via Stefan problems for heat conduction accompanied by a change of phase, more recently such approaches have been adapted to study biological invasion. For example, when a logistic growth term is added to the governing partial differential equation in a Stefan problem, one arrives at the Fisher–Stefan model, a generalization of the well-known Fisher–KPP model, characterized by a leakage coefficient (Formula presented.) which relates the speed of the moving boundary to the flux of population there. This Fisher–Stefan model overcomes one of the well-known limitations of the Fisher–KPP model, since time-dependent solutions of the Fisher–Stefan model involve a well-defined front which is more natural in terms of mathematical modeling. Almost all of the existing analysis of the standard Fisher–Stefan model involves setting (Formula presented.), which can lead to either invading traveling wave solutions or complete extinction of the population. Here, we demonstrate how setting (Formula presented.) leads to retreating traveling waves and an interesting transition to finite-time blow-up. For certain initial conditions, population extinction is also observed. Our approach involves studying time-dependent solutions of the governing equations, phase plane, and asymptotic analysis, leading to new insight into the possibilities of traveling waves, blow-up, and extinction for this moving boundary problem. MATLAB software used to generate the results in this work is available on Github.</p