Phase diagram of 2D array of mesoscopic granules

A lattice boson model is used to study ordering phenomena in regular 2D array of superconductive mesoscopic granules, Josephson junctions or pores filled with a superfluid helium. Phase diagram of the system, when quantum fluctuations of both the phase and local superfluid density are essential, is analyzed both analytically and by quantum Monte Carlo technique. For the system of strongly interacting bosons it is found that as the boson density $n_0$ is increased the boundary of ordered superconducting state shifts to {\it lower temperatures} and at $n_0 > 8$ approaches its limiting position corresponding to negligible relative fluctuations of moduli of the order parameter (as in an array of "macroscopic" granules). In the region of weak quantum fluctuations of phases mesoscopic phenomena manifest themselves up to $n_0 \sim 10$. The mean field theory and functional integral $1/n_0$ - expansion results are shown to agree with that of quantum Monte Carlo calculations of the boson Hubbard model and its quasiclassical limit, the quantum XY model.Comment: 7 pages, 5 Postscript figure

Phase and Charge reentrant phase transitions in two capacitively coupled Josephson arrays with ultra-small junction

We have studied the phase diagram of two capacitively coupled Josephson junction arrays with charging energy, $E_c$, and Josephson coupling energy, $E_J$. Our results are obtained using a path integral Quantum Monte Carlo algorithm. The parameter that quantifies the quantum fluctuations in the i-th array is defined by $\alpha_i\equiv \frac{E_{{c}_i}}{E_{J_i}}$. Depending on the value of $\alpha_i$, each independent array may be in the semiclassical or in the quantum regime: We find that thermal fluctuations are important when $\alpha \lesssim 1.5$ and the quantum fluctuations dominate when $2.0 \lesssim \alpha$. We have extensively studied the interplay between vortex and charge dominated individual array phases. The two arrays are coupled via the capacitance $C_{{\rm inter}}$ at each site of the lattices. We find a {\it reentrant transition} in $\Upsilon(T,\alpha)$, at low temperatures, when one of the arrays is in the semiclassical limit (i.e. $\alpha_{1}=0.5$) and the quantum array has $2.0 \leq\alpha_{2} \leq 2.5$, for the values considered for the interlayer capacitance. In addition, when $3.0 \leq \alpha_{2} < 4.0$, and for all the inter-layer couplings considered above, a {\it novel} reentrant phase transition occurs in the charge degrees of freedom, i.e. there is a reentrant insulating-conducting transition at low temperatures. We obtain the corresponding phase diagrams and found some features that resemble those seen in experiments with 2D JJA.Comment: 25 Latex pages including 8 encapsulated poscript figures. Accepted for publication in Phys. Rev B (Nov. 2004 Issue

Does cytomegalovirus infection contribute to socioeconomic disparities in all-cause mortality?

The social patterning of cytomegalovirus (CMV) and its implication in aging suggest that the virus may partially contribute to socioeconomic disparities in mortality. We used Cox regression and inverse odds ratio weighting to quantify the proportion of the association between socioeconomic status (SES) and all-cause mortality that was attributable to mediation by CMV seropositivity. Data were from the National Health and Nutrition Examination Survey (NHANES) III (1988–1994), with mortality follow-up through December 2011. SES was assessed as household income (income-to-poverty ratio ≤1.30; >1.30 to ≤1.85; >1.85 to ≤3.50; >3.50) and education (high school). We found strong associations between low SES and increased mortality: hazard ratio (HR) 1.80; 95% confidence interval (CI): 1.57, 2.06 comparing the lowest versus highest income groups and HR 1.29; 95% CI: 1.13, 1.48 comparing high school education. 65% of individuals were CMV seropositive, accounting for 6–15% of the SES-mortality associations. Age modified the associations between SES, CMV, and mortality, with CMV more strongly associated with mortality in older individuals. Our findings suggest that cytomegalovirus may partially contribute to persistent socioeconomic disparities in mortality, particularly among older individuals

Two-dimensional macroscopic quantum dynamics in YBCO Josephson junctions

We theoretically study classical thermal activation (TA) and macroscopic quantum tunneling (MQT) for a YBCO Josephson junction coupled with an LC circuit. The TA and MQT escape rate are calculated by taking into account the two-dimensional nature of the classical and quantum phase dynamics. We find that the MQT escape rate is largely suppressed by the coupling to the LC circuit. On the other hand, this coupling leads to the slight reduction of the TA escape rate. These results are relevant for the interpretation of a recent experiment on the MQT and TA phenomena in YBCO bi-epitaxial Josephson junctions.Comment: 9 pages, 2 figure

Mean Field Theory of Josephson Junction Arrays with Charge Frustration

Using the path integral approach, we provide an explicit derivation of the equation for the phase boundary for quantum Josephson junction arrays with offset charges and non-diagonal capacitance matrix. For the model with nearest neighbor capacitance matrix and uniform offset charge $q/2e=1/2$, we determine, in the low critical temperature expansion, the most relevant contributions to the equation for the phase boundary. We explicitly construct the charge distributions on the lattice corresponding to the lowest energies. We find a reentrant behavior even with a short ranged interaction. A merit of the path integral approach is that it allows to provide an elegant derivation of the Ginzburg-Landau free energy for a general model with charge frustration and non-diagonal capacitance matrix. The partition function factorizes as a product of a topological term, depending only on a set of integers, and a non-topological one, which is explicitly evaluated.Comment: LaTex, 24 pages, 8 figure

Quantum effects in a superconducting glass model

We study disordered Josephson junctions arrays with long-range interaction and charging effects. The model consists of two orthogonal sets of positionally disordered $N$ parallel filaments (or wires) Josephson coupled at each crossing and in the presence of a homogeneous and transverse magnetic field. The large charging energy (resulting from small self-capacitance of the ultrathin wires) introduces important quantum fluctuations of the superconducting phase within each filament. Positional disorder and magnetic field frustration induce spin-glass like ground state, characterized by not having long-range order of the phases. The stability of this phase is destroyed for sufficiently large charging energy. We have evaluated the temperature vs charging energy phase diagram by extending the methods developed in the theory of infinite-range spin glasses, in the limit of large magnetic field. The phase diagram in the different temperature regimes is evaluated by using variety of methods, to wit: semiclassical WKB and variational methods, Rayleigh-Schr\"{o}dinger perturbation theory and pseudospin effective Hamiltonians. Possible experimental consequences of these results are briefly discussed.Comment: 17 pages REVTEX. Two Postscript figures can be obtained from the authors. To appear in PR

Quantum critical point and scaling in a layered array of ultrasmall Josephson junctions

We have studied a quantum Hamiltonian that models an array of ultrasmall Josephson junctions with short range Josephson couplings, $E_J$, and charging energies, $E_C$, due to the small capacitance of the junctions. We derive a new effective quantum spherical model for the array Hamiltonian. As an application we start by approximating the capacitance matrix by its self-capacitive limit and in the presence of an external uniform background of charges, $q_x$. In this limit we obtain the zero-temperature superconductor-insulator phase diagram, $E_J^{\rm crit}(E_C,q_x)$, that improves upon previous theoretical results that used a mean field theory approximation. Next we obtain a closed-form expression for the conductivity of a square array, and derive a universal scaling relation valid about the zero--temperature quantum critical point. In the latter regime the energy scale is determined by temperature and we establish universal scaling forms for the frequency dependence of the conductivity.Comment: 18 pages, four Postscript figures, REVTEX style, Physical Review B 1999. We have added one important reference to this version of the pape

Well-Tempered Metadynamics Simulations Predict the Structural and Dynamic Properties of a Chiral 24-Atom Macrocycle in Solution

Inspired by therapeutic potential, the molecular engineering of macrocycles is garnering increased interest. Exercising control with design, however, is challenging due to the dynamic behavior that these molecules must demonstrate in order to be bioactive. Herein, the value of metadynamics simulations is demonstrated: the free-energy surfaces calculated reveal folded and flattened accessible conformations of a 24-atom macrocycle separated by barriers of c.a. 6 kT under experimentally relevant conditions. Simulations reveal that the dominant conformer is folded-an observation consistent with a solid-state structure determined by X-ray crystallography and a network of rOes established by 1H NMR. Simulations suggest that the macrocycle exists as a rapidly interconverting pair of enantiomeric, folded structures. Experimentally, 1H NMR shows a single species at room temperature. However, at lower temperature, the interconversion rate between these enantiomers becomes markedly slower, resulting in the decoalescence of enantiotopic methylene protons into diastereotopic, distinguishable resonances due to the persistence of conformational chirality. The emergence of conformational chirality provides critical experimental support for the simulations, revealing the dynamic nature of the scaffold-a trait deemed critical for oral bioactivity