Estimation of Agronomic Characters of Wheat Based on Variable Selection and Machine Learning Algorithms

Wheat is one of the most important food crops in the world, and its high and stable yield is of great significance for ensuring food security. Timely, non-destructive, and accurate monitoring of wheat growth information is of great significance for optimizing cultivation management, improving fertilizer utilization efficiency, and improving wheat yield and quality. Different color indices and vegetation indices were calculated based on the reflectance of the wheat canopy obtained by a UAV remote sensing platform equipped with a digital camera and a hyperspectral camera. Three variable-screening algorithms, namely competitive adaptive re-weighted sampling (CARS), iteratively retains informative variables (IRIVs), and the random forest (RF) algorithm, were used to screen the acquired indices, and then three regression algorithms, namely gradient boosting decision tree (GBDT), multiple linear regression (MLR), and random forest regression (RFR), were used to construct the monitoring models of wheat aboveground biomass (AGB) and leaf nitrogen content (LNC), respectively. The results showed that the three variable-screening algorithms demonstrated different performances for different growth indicators, with the optimal variable-screening algorithm for AGB being RF and the optimal variable-screening algorithm for LNC being CARS. In addition, using different variable-screening algorithms results in more vegetation indices being selected than color indices, and it can effectively avoid autocorrelation between variables input into the model. This study indicates that constructing a model through variable-screening algorithms can reduce redundant information input into the model and achieve a better estimation of growth parameters. A suitable combination of variable-screening algorithms and regression algorithms needs to be considered when constructing models for estimating crop growth parameters in the future

Predicting grain protein content of field-grown winter wheat with satellite images and partial least square algorithm.

Remote sensing has been used as an important means of modern crop production monitoring, especially for wheat quality prediction in the middle and late growth period. In order to further improve the accuracy of estimating grain protein content (GPC) through remote sensing, this study analyzed the quantitative relationship between 14 remote sensing variables obtained from images of environment and disaster monitoring and forecasting small satellite constellation system equipped with wide-band CCD sensors (abbreviated as HJ-CCD) and field-grown winter wheat GPC. The 14 remote sensing variables were normalized difference vegetation index (NDVI), soil-adjusted vegetation index (SAVI), optimized soil-adjusted vegetation index (OSAVI), nitrogen reflectance index (NRI), green normalized difference vegetation index (GNDVI), structure intensive pigment index (SIPI), plant senescence reflectance index (PSRI), enhanced vegetation index (EVI), difference vegetation index (DVI), ratio vegetation index (RVI), Rblue (reflectance at blue band), Rgreen (reflectance at green band), Rred (reflectance at red band) and Rnir (reflectance at near infrared band). The partial least square (PLS) algorithm was used to construct and validate the multivariate remote sensing model of predicting wheat GPC. The research showed a close relationship between wheat GPC and 12 remote sensing variables other than Rblue and Rgreen of the spectral reflectance bands. Among them, except PSRI and Rblue, Rgreen and Rred, other remote sensing vegetation indexes had significant multiple correlations. The optimal principal components of PLS model used to predict wheat GPC were: NDVI, SIPI, PSRI and EVI. All these were sensitive variables to predict wheat GPC. Through modeling set and verification set evaluation, GPC prediction models' coefficients of determination (R2) were 0.84 and 0.8, respectively. The root mean square errors (RMSE) were 0.43% and 0.54%, respectively. It indicated that the PLS algorithm model predicted wheat GPC better than models for linear regression (LR) and principal components analysis (PCA) algorithms. The PLS algorithm model's prediction accuracies were above 90%. The improvement was by more than 20% than the model for LR algorithm and more than 15% higher than the model for PCA algorithm. The results could provide an effective way to improve the accuracy of remotely predicting winter wheat GPC through satellite images, and was conducive to large-area application and promotion

Estimation of Wheat Plant Height and Biomass by Combining UAV Imagery and Elevation Data

Aboveground biomass (AGB) is an important basis for wheat yield formation. It is useful to timely collect the AGB data to monitor wheat growth and to build high-yielding wheat groups. However, as traditional AGB data acquisition relies on destructive sampling, it is difficult to adapt to the modernization of agriculture, and the estimation accuracy of spectral data alone is low and cannot solve the problem of index saturation at later stages. In this study, an unmanned aerial vehicle (UAV) with an RGB camera and the real-time kinematic (RTK) was used to obtain imagery data and elevation data at the same time during the critical fertility period of wheat. The cumulative percentile and the mean value methods were then used to extract the wheat plant height (PH), and the color indices (CIS) and PH were combined to invert the AGB of wheat using parametric and non-parametric models. The results showed that the accuracy of the model improved with the addition of elevation data, and the model with the highest accuracy of multi-fertility period estimation was PLSR (PH + CIS), with R2, RMSE and NRMSE of 0.81, 1248.48 kg/ha and 21.77%, respectively. Compared to the parametric models, the non-parametric models incorporating PH and CIS greatly improved the prediction of AGB during critical fertility periods in wheat. The inclusion of elevation data therefore greatly improves the accuracy of AGB prediction in wheat compared to traditional spectral prediction models. The fusion of UAV-based elevation data and image information provides a new technical tool for multi-season wheat AGB monitoring

Estimation of grain yield in wheat using source–sink datasets derived from RGB and thermal infrared imaging

Abstract Timely and efficient monitoring of crop aboveground biomass (AGB) and grain yield (GY) forecasting before harvesting are critical for improving crop yields and ensuring food security in precision agriculture. The purpose of this study is to explore the potential of fusing source–sink‐level color, texture, and temperature values extracted from RGB images and thermal images based on proximal sensing technology to improve grain yield prediction. High‐quality images of wheat from flowering to maturity under different treatments of nitrogen application were collected using proximal sensing technology over a 2‐year trial. Numerous variables based on source and sink organs were extracted from the acquired subsample images, including 30 color features, 10 texture features, and two temperature values. The principal component analysis (PCA), least absolute shrinkage and selection operator (LASSO), and recursive feature elimination (RFE) were used to screen variables. Support vector regression (SVR) and random forest (RF) were applied to establish AGB estimation models, and the GY prediction models were built by RF. The source dataset and sink dataset performed differently on AGB and GY estimation, but the combined source–sink dataset performed best for estimating both AGB and GY. Based on the source–sink dataset, the LASSO‐RF model was the best combination for predicting AGB and GY, with the coefficient of determination (R2) of 0.85 and 0.86, root mean square error (RMSE) of 1179.09 and 609.61 kg ha−1, and the ratio of performance to deviation (RPD) of 2.10 and 2.45, respectively. This study demonstrates that the multivariate eigenvalues of both source and sink organs have the potential to predict wheat yield and that the combination of machine learning models and variable selection methods can significantly affect the accuracy of yield prediction models and achieve effective monitoring of crop growth at late reproductive stages

Analysis of Different Hyperspectral Variables for Diagnosing Leaf Nitrogen Accumulation in Wheat

Hyperspectral remote sensing is a rapid non-destructive method for diagnosing nitrogen status in wheat crops. In this study, a quantitative correlation was associated with following parameters: leaf nitrogen accumulation (LNA), raw hyperspectral reflectance, first-order differential hyperspectra, and hyperspectral characteristics of wheat. In this study, integrated linear regression of LNA was obtained with raw hyperspectral reflectance (measurement wavelength = 790.4 nm). Furthermore, an exponential regression of LNA was obtained with first-order differential hyperspectra (measurement wavelength = 831.7 nm). Coefficients (R2) were 0.813 and 0.847; root mean squared errors (RMSE) were 2.02 g·m−2 and 1.72 g·m−2; and relative errors (RE) were 25.97% and 20.85%, respectively. Both the techniques were considered as optimal in the diagnoses of wheat LNA. Nevertheless, the better one was the new normalized variable (SDr − SDb)/(SDr + SDb), which was based on vegetation indices of R2 = 0.935, RMSE = 0.98, and RE = 11.25%. In addition, (SDr − SDb)/(SDr + SDb) was reliable in the application of a different cultivar or even wheat grown elsewhere. This indicated a superior fit and better performance for (SDr − SDb)/(SDr + SDb). For diagnosing LNA in wheat, the newly normalized variable (SDr − SDb)/(SDr + SDb) was more effective than the previously reported data of raw hyperspectral reflectance, first-order differential hyperspectra, and red-edge parameters

Remotely Assessing Fraction of Photosynthetically Active Radiation (FPAR) for Wheat Canopies Based on Hyperspectral Vegetation Indexes

Fraction of photosynthetically active radiation (FPAR), as an important index for evaluating yields and biomass production, is key to providing the guidance for crop management. However, the shortage of good hyperspectral data can frequently result in the hindrance of accurate and reliable FPAR assessment, especially for wheat. In the present research, aiming at developing a strategy for accurate FPAR assessment, the relationships between wheat canopy FPAR and vegetation indexes derived from concurrent ground-measured hyperspectral data were explored. FPAR revealed the most strongly correlation with normalized difference index (NDI), and scaled difference index (N*). Both NDI and N* revealed the increase as the increase of FPAR; however, NDI value presented the stagnation as FPAR value beyond 0.70. On the other hand, N* showed a decreasing tendency when FPAR value was higher than 0.70. This special relationship between FPAR and vegetation index could be employed to establish a piecewise FPAR assessment model with NDI as a regression variable during FPAR value lower than 0.70, or N* as the regression variable during FPAR value higher than 0.70. The model revealed higher assessment accuracy up to 16% when compared with FPAR assessment models based on a single vegetation index. In summary, it is feasible to apply NDI and N* for accomplishing wheat canopy FPAR assessment, and establish an FPAR assessment model to overcome the limitations from vegetation index saturation under the condition with high FPAR value

Electron hopping transport in two-dimensional semiconductor - zinc oxide nanoflakes

The sequential hydrothermal process is used to synthesize ZnO nanostructures on Si substrates. The synthesized ZnO nanostructures are inspected by scanning electron microscope and transmission electron microscope. They present a morphology of two-dimensional structures, named nanoflakes. The ZnO nanoflakes have a thickness of tens of nanometers. The energy dispersive x-ray spectrum reveals their compositions of only Zn and O elements. In addition, its crystalline structures are investigated by high-resolution transmission electron microscope. The nanoflakes are then dispersed for another morphology measurement using atomic force microscope and their average thickness is determined. The dispersed nanoflakes are contacted with metal electrodes for electron transport measurements. Through the analysis of electrical and temperature dependences of resistivity, it is confirmed that the electron transport in ZnO nanoflakes agree well with the theory of Mott’s two-dimensional variable range hopping. The nature of two-dimensional electron system in ZnO nanoflakes points to the application of this two-dimensional semiconductor as new channel materials for electronic devices

Electron hopping transport in 2D zinc oxide nanoflakes

A sequential hydrothermal process was used to synthesize ZnO nanostructures on Si substrates. The synthesized ZnO nanostructures were inspected and presented a morphology of 2D structures, named nanoflakes. These ZnO nanoflakes had a thickness of tens of nanometers. An energy dispersive x-ray spectrum revealed their composition of only Zn and O elements. In addition, its crystalline structure was investigated by high-resolution transmission electron microscopy. The nanoflakes were then dispersed for another morphology measurement using atomic force microscopy and their average thickness was determined. The dispersed nanoflakes were further contacted with metal electrodes for electron transport measurements. Through the analysis of temperature-dependent resistivity, it was confirmed that the electron transport in such ZnO nanoflakes agrees well with the theory of Mott's 2D variable range hopping. The nature of the 2D electron system in the ZnO nanoflakes points to potential applications of this 2D semiconductor as a new channel material for electronics