Identification of bacteria and fungi inhabiting fruiting bodies of Burgundy truffle (Tuber aestivum Vittad.)

Tuber species may be regarded as complex microhabitats hosting diverse microorganisms inside their fruiting bodies. Here, we investigated the structure of microbial communities inhabiting the gleba of wild growing (in stands) T. aestivum, using Illumina sequencing and culture-based methods. The two methods used in combination allowed to extract more information on complex microbiota of Tuber aestivum gleba. Analysis of the V3–V4 region of 16S rDNA identified nine phyla of bacteria present in the gleba of T. aestivum ascomata, mostly Proteobacteria from the family Bradyrhizobiaceae. Our results ideally match the earlier data for other Tuber species where the family Bradyrhizobiaceae was the most represented. The ITS1 region of fungal rDNA represented six alien fungal species belonging to three phyla. To complement the metagenomic analysis, cultivable fungi and bacteria were obtained from the gleba of the same T. aestivum fruiting bodies. The identified fungi mostly belong to the phylum Basidiomycota and same to Ascomycota. Analysis of cultivable bacteria revealed that all the specimens were colonized by different strains of Bacillus. Fungal community inhabiting T. aestivum fruiting bodies was never shown before

Endophytes – characteristics and possibilities of application in forest management

Endophytes are organisms that live within the plant tissue without usually causing any symptoms. In plants of natural ecosystems, endophytic fungi are in fact ubiquitous. This review summarizes research carried out on their biology emphasizing their functionality in terms of the host range, the colonization extent, the way of transmission between hosts and their influence on host fitness. The main focus will be on two classes of fungal endophytes, class 2 and 4 (Dark Septate Fungi), due to their potential for practical application in forestry. Raising awareness of the potential of endophytes to enhance the host’s resistance to pathogens, insects and anthropogenic disturbances is a key factor in developing applications for forest management

Medicinal properties of macrofungi

This review highlights the importance to people of some types of wild fungi considered in the context of non-wood forest products. Macrofungi are used both for food and medicine proposes. Substances isolated from the higher Basidiomycetes and Ascomycetes mushrooms express promising immune modulating, antitumor, antiviral, antibacterial and antidiabetic properties. They have been, and are presently, used against cancer in some countries in Far East as well as in the United States of America and Canada. Their useful properties are mainly conferred by biologically-active polysaccharides present in the fruiting bodies and cultured mycelium. A few dozen different polysaccharide antitumor agents have been developed from such species as: Ganoderma lucidum, Lentinus edodes, Schizophylum commune, Trametes versicolor and Inonotus obliquus. In the review some other fungi and their properties are also described. The information is provided to widen our knowledge of the importance of the organisms that live in forest ecosystems

Diversity of soil bacteria complexes associated with summer truffle (Tuber aestivum)

This paper describes the quantitative and qualitative composition of bacteria isolated from soil in the selected sites in the Nida Basin, in places where mycorrhizae and ascocarps of summer truffle (Tuber aestivum) were found, and in a control soil (without truffle). A classic growth culture method was used with Sanger DNA sequencing to obtain quantitative and qualitative measures of bacterial cultures. The obtained results showed differences in bacteriome composition between the case samples, in which summer truffle fructification was observed, and the control samples. Seven classes of bacteria were identified: Actinobacteria, Bacilli, Deinococci, Flavobacteria, Alphaproteobacteria, Betaproteobacteria, and Gammaproteobacteria. The most numerous bacterial genera were Pseudomonas (class Gammaproteobacteria) – 33%, Streptomyces (class Actinobacteria) – 29% and Bacillus (class Bacilli) – 15%. This research broadens the understanding of individual groups of bacteria accompanying truffles and their potential impact on the formation of summer truffle ascocarps

Influence of resting and pine sawdust application on chemical changes in post-agricultural soil and the ectomycorrhizal community of growing Scots pine saplings

Changes in chemical compounds and in ectomycorrhizal structure were determined for Scots pine growing on post agricultural soil lying fallow for 3, 6 and 15 years, after amendment with pine sawdust. Soil without any amendments was used as the control treatment. Comparing the ectomycorrhizal structure 15 years after the application of pine sawdust revealed no significant differences in abundance or species richness between soil with and without organic enrichment. The results showed that the ectomycorrhizal status depends on soil conditions (soil pH, nitrogen content), which remain unaffected by saw dust application. In all treatments, the most frequently occurring ectomycorrhizae genera were Dermocybe, Hebeloma, Suillus, Tomentella and Tricholoma. Two species (Paxillus involutus, Amanita muscaria) were specific to the control plots that lay fallow for 15 years

Diversity of soil bacteria complexes associated with summer truffle (Tuber aestivum)

This paper describes the quantitative and qualitative composition of bacteria isolated from soil in the selected sites in the Nida Basin, in places where mycorrhizae and ascocarps of summer truffle (Tuber aestivum) were found, and in a control soil (without truffle). A classic growth culture method was used with Sanger DNA sequencing to obtain quantitative and qualitative measures of bacterial cultures. The obtained results showed differences in bacteriome composition between the case samples, in which summer truffle fructification was observed, and the control samples. Seven classes of bacteria were identified: Actinobacteria, Bacilli, Deinococci, Flavobacteria, Alphaproteobacteria, Betaproteobacteria, and Gammaproteobacteria. The most numerous bacterial genera were Pseudomonas (class Gammaproteobacteria) – 33%, Streptomyces (class Actinobacteria) – 29% and Bacillus (class Bacilli) – 15%. This research broadens the understanding of individual groups of bacteria accompanying truffles and their potential impact on the formation of summer truffle ascocarps

Changes in nitrogen level and mycorrhizal structure of Scots pine seedlings inoculated with Thelephora terrestris

$\bullet$ We investigated the influence of Thelephora terrestris, an ectomycorrhizal fungus, on the concentration of nitrogen in needles of Pinus sylvestris L. seedlings and their mycorrhizal structure within four seasons of growth. $\bullet$ Seedlings were grown in four treatments: (I) inoculated + 0.030 g N, (II) inoculated + 0.045 g N, (III) non-inoculated + 0.030 g N, (IV) non-inoculated + 0.045 g N under laboratory conditions and later planted in post-agricultural land. $\bullet$ For inoculated treatments, statistically significant differences in N concentration of needles were observed for two- and four-year-old seedlings. The number of ectomycorrhizae and concentration of N in needles were negatively correlated. After four seasons of growth the greatest numbers of ectomycorrhizae were present on seedlings from treatment II, and the smallest on seedlings from treatment IV. $\bullet$ Two-year-old seedlings had been colonized by at least six different fungal taxa, i.e. Cenococcum geophilum, Hebeloma crustuliniforme, Rhizopogon sp., Suillus bovinus, Thelephora terrestris and a non-identified one. Treatments I and II were dominated by the ectomycorrhizae of T. terrestris and their number was significantly greater than in treatments III or IV. On four-year-old seedlings ectomycorrhizae of T. terrestris were dominated in all treatments, while ectomycorrhizae of Hebeloma sp. were not found.Modifications du niveau d'azote et de la structure mycorhizienne de semis de pin sylvestre inoculés par Thelephora terrestris. $\bullet$ L'influence du champignon ectomycorhizien Thelephora terrestris sur la concentration en azote dans les aiguilles de semis de pin sylvestre et sur la structure mycorhizienne des plants a été suivie durant quatre saisons de croissance. $\bullet$ Les semis ont été cultivés sous quatre traitements : (I) inoculé + 0,030 g N, (II) inoculés + 0,045 g N, (III) non inoculés + 0,030 g N, (IV) non inoculés + 0,045 g N, dans les conditions du laboratoire avant d'être plantés sur le terrain. $\bullet$ Dans les traitements d'inoculés, des différences significatives ont été observées dans la concentration des aiguilles en azote pour les semis de deux et quatre ans. Le nombre de mycorhizes et la concentration des aiguilles en azote étaient corrélés négativement. Après quatre saisons de croissance, le plus grand nombre de mycorhizes a été obtenu dans le traitement II et le plus petit dans le traitement IV. $\bullet$ Les semis de deux ans avaient été colonisés par au moins six taxons différents de champignon : Cenococcum geophilum, Hebeloma crustuliniforme, Rhizopogon sp., Suillus bovinus, Thelephora terrestris et un autre taxon indéterminé. Dans les traitements I et II, les ectomycorhizes de T. terrestris dominaient et leur nombre était plus élevé que dans les traitements III et IV. Pour les semis de quatre ans, les ectomycorhizes de T. terrestris dominaient dans tous les traitements, tandis que celles de Hebeloma sp. étaient absentes

Ocena zmian w ekosystemach leśnych na terenach poklęskowych w Sudetach, ze szczególnym uwzględnieniem rewitalizacji gleb i ich wpływu na stan zdrowotny odnowień =Evaluation of health status of forest ecosystems in Sudetes after ecological disaster with special regard to revitalization of forest soils and its influence on regeneration

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