Modeling hydrodynamic self-propulsion with Stokesian Dynamics. Or teaching Stokesian Dynamics to swim

We develop a general framework for modeling the hydrodynamic self-propulsion (i.e., swimming) of bodies (e.g., microorganisms) at low Reynolds number via Stokesian Dynamics simulations. The swimming body is composed of many spherical particles constrained to form an assembly that deforms via relative motion of its constituent particles. The resistance tensor describing the hydrodynamic interactions among the individual particles maps directly onto that for the assembly. Specifying a particular swimming gait and imposing the condition that the swimming body is force- and torque-free determine the propulsive speed. The body’s translational and rotational velocities computed via this methodology are identical in form to that from the classical theory for the swimming of arbitrary bodies at low Reynolds number. We illustrate the generality of the method through simulations of a wide array of swimming bodies: pushers and pullers, spinners, the Taylor=Purcell swimming toroid, Taylor’s helical swimmer, Purcell’s three-link swimmer, and an amoeba-like body undergoing large-scale deformation. An open source code is a part of the supplementary material and can be used to simulate the swimming of a body with arbitrary geometry and swimming gait

A model of CP Violation from Extra Dimension

We construct a realistic model of CP violation in which CP is broken in the process of dimensional reduction and orbifold compactification from a five dimensional theories with $SU(3)\times SU(3) \times SU(3)$ gauge symmetry. CP violation is a result of the Hosotani type gauge configuration in the higher dimension.Comment: 5 page

Prolonged Excretion of Poliovirus among Individuals with Primary Immunodeficiency Disorder: An Analysis of the World Health Organization Registry.

Individuals with primary immunodeficiency disorder may excrete poliovirus for extended periods and will constitute the only remaining reservoir of virus after eradication and withdrawal of oral poliovirus vaccine. Here, we analyzed the epidemiology of prolonged and chronic immunodeficiency-related vaccine-derived poliovirus cases in a registry maintained by the World Health Organization, to identify risk factors and determine the length of excretion. Between 1962 and 2016, there were 101 cases, with 94/101 (93%) prolonged excretors and 7/101 (7%) chronic excretors. We documented an increase in incidence in recent decades, with a shift toward middle-income countries, and a predominance of poliovirus type 2 in 73/101 (72%) cases. The median length of excretion was 1.3 years (95% confidence interval: 1.0, 1.4) and 90% of individuals stopped excreting after 3.7 years. Common variable immunodeficiency syndrome and residence in high-income countries were risk factors for long-term excretion. The changing epidemiology of cases, manifested by the greater incidence in recent decades and a shift to from high- to middle-income countries, highlights the expanding risk of poliovirus transmission after oral poliovirus vaccine cessation. To better quantify and reduce this risk, more sensitive surveillance and effective antiviral therapies are needed

Dwarf mistletoe survey, Hebgen Lake Ranger District, Gallatin National Forest, Montana

Large areas of dwarf mistletoe-free, all-aged lodgepole pine have been identified in the West Yellowstone Basin. The option of uneven-aged management in these areas remains available to the District

Hearing and vocalizations in the orange-fronted conure (Aratinga canicularis

The auditory sensitivities of the orange-fronted conure (Aratinga canicularis) were examined in relation to the spectral characteristics of its vocalizations. Absolute thresholds, masked thresholds, frequency difference limens, and intensity difference limens for pure tones were obtained using psychoacoustic techniques. In general, hearing abilities are similar to those found in many avian auditory generalists. One exception is the unusually low critical ratio (masked threshold) between 2.0 and 4.0 kHz, similar to that previously found in the budgerigar (Melopsittacus undulatus). These auditory sensitivities were compared with average spectra for (a) contact calls and (b) a general sample of vocalizations recorded from wild birds. The spectral regions of both greatest vocal energy and best auditory sensitivity were between 2.0 and 5.0 kHz

Report of the Beyond the MSSM Subgroup for the Tevatron Run II SUSY/Higgs Workshop

There are many low-energy models of supersymmetry breaking parameters which are motivated by theoretical and experimental considerations. Here, we discuss some of the lesser-known theories of low-energy supersymmetry, and outline their phenomenological consequences. In some cases, these theories have more gauge symmetry or particle content than the Minimal Supersymmetric Standard Model. In other cases, the parameters of the Lagrangian are unusual compared to commonly accepted norms (e.g., Wino LSP, heavy gluino LSP, light gluino, etc.). The phenomenology of supersymmetry varies greatly between the different models. Correspondingly, particular aspects of the detectors assume greater or lesser importance. Detection of supersymmetry and the determination of all parameters may well depend upon having the widest possible view of supersymmetry phenomenology.Comment: 78 pages, 49 figures, to appear in the Proceedings of the Tevatron Run II SUSY/Higgs Workshop. Editor: J. F. Gunion; BTMSSM Convenors: M. Chertok, H. Dreiner, G. Landsberg, J. F. Gunion, J.D. Well

The hidden sterile neutrino and the (2+2) sum rule

We discuss oscillations of atmospheric and solar neutrinos into sterile neutrinos in the 2+2 scheme. A zeroth order sum rule requires equal probabilities for oscillation into nu_s and nu_tau in the solar+atmospheric data sample. Data does not favor this claim. Here we use scatter plots to assess corrections of the zeroth order sum rule when (i) the 4 x 4 neutrino mixing matrix assumes its full range of allowed values, and (ii) matter effects are included. We also introduce a related "product rule". We find that the sum rule is significantly relaxed, due to both the inclusion of the small mixing angles (which provide a short-baseline contribution) and to matter effects. The product rule is also dramatically altered. The observed relaxation of the sum rule weakens the case against the 2+2 model and the sterile neutrino. To invalidate the 2+2 model, a global fit to data with the small mixing angles included seems to be required.Comment: 43 pages, 11 figures (same as v2, accidental replacement

Matter Effects on Neutrino Oscillations in Long Baseline Experiments

We calculate matter effects on neutrino oscillations relevant for long baseline experiments. In particular, we compare the results obtained with constant density along the neutrino path versus results obtained by incorporating the actual density profiles in the Earth. We study the dependence of the oscillation signal on both $E/\Delta m^2_{atm}$ and on the angles in the leptonic mixing matrix. We also comment on the influence of $\Delta m^2_{sol}$ on the oscillations. The results show quantitatively how, as a function of these input parameters, matter effects can cause significant (25 %) changes in the oscillation probabilities. An important conclusion is that matter effects can be useful in amplifying certain neutrino oscillation signals and helping one to obtain measurements of mixing parameters and the magnitude and sign of $\Delta m^2_{atm}$.Comment: 26 pages, Latex, 17 postscript figures, published version, some references adde

Evaluation of dwarf mistletoe control, Sula Ranger District, Bitterroot National Forest

Residual Douglas-fir left after harvesting are dwarf mistletoe-infected and pose a threat to regeneration. Felling of residuals, coupled with planned slash disposal and thinning, will effectively reduce dwarf mistletoe intensity and increase future volume yields. The benefit/cost ratio based on timber values only, for the current rotation, is 0.041/1 at 10 percent and 1.793/1 at 6 percent. Elimination of dwarf mistletoe infection for several rotations will increase the benefit/cost ratio. Value added to the economy cannot be used in benefit/cost analysis, but will be a substantial sum. Control is recommended