173 research outputs found

    Continuous GPS Observations of Postseismic Deformation Following the 16 October 1999 Hector Mine, California, Earthquake (M_w 7.1)

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    Rapid field deployment of a new type of continuously operating Global Positioning System (GPS) network and data from Southern California Integrated GPS Network (SCIGN) stations that had recently begun operating in the area allow unique observations of the postseismic deformation associated with the 1999 Hector Mine earthquake. Innovative solutions in fieldcraft, devised for the 11 new GPS stations, provide high-quality observations with 1-year time histories on stable monuments at remote sites. We report on our results from processing the postseismic GPS data available from these sites, as well as 8 other SCIGN stations within 80 km of the event (a total of 19 sites). From these data, we analyze the temporal character and spatial pattern of the postseismic transients. Data from some sites display statistically significant time variation in their velocities. Although this is less certain, the spatial pattern of change in the postseismic velocity field also appears to have changed. The pattern now is similar to the pre-Landers (pre-1992) secular field, but laterally shifted and locally at twice the rate. We speculate that a 30 km × 50 km portion of crust (near Twentynine Palms), which was moving at nearly the North American plate rate (to within 3.5 mm/yr of that rate) prior to the 1992 Landers sequence, now is moving along with the crust to the west of it, as though it has been entrained in flow along with the Pacific Plate as a result of the Landers and Hector Mine earthquake sequence. The inboard axis of right-lateral shear deformation (at lower crustal to upper mantle depth) may have jumped 30 km farther into the continental crust at this fault junction that comprises the southern end of the eastern California shear zone

    Annotated bibliography of research in the teaching of English

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    The committee reviews important research works in the teaching of English that have been published in the last year. Committee members include Richard Beach, Martha Bigelow, Martine Braaksma, Deborah Dillon, Jessie Dockter, Lee Galda, Lori Helman, Tanja Janssen, Karen Jorgensen, Richa Kapoor, Lauren Liang, Bic Ngo, David O’Brien, Mistilina Sato, and Cassie Scharber

    Performance and Diagnostic Accuracy of a Urine-Based Human Papillomavirus Assay in a Referral Population

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    Cancer Research UK Programme grant C569/A16891 provided funding to J.M. Cuzick, supplemented by financial contributions and assay kits to J.M. Cuzick from Trovagene, Qiagen, BD, Abbott, Genera, Hologic and Oncohealth

    Transcriptional and biochemical analyses of gibberellin expression and content in germinated barley grain

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    Mobilization of reserves in germinated cereal grains is critical for early seedling vigour, global crop productivity and hence food security. Gibberellins (GAs) are central to this process. We have developed a spatio-temporal model that describes the multifaceted mechanisms of GA regulation in germinated barley grain. The model was generated using RNA-seq transcript data from tissues dissected from intact, germinated grain, which closely match measurements of GA hormones and their metabolites in those tissues. The data show that successful grain germination is underpinned by high concentrations of GA precursors in ungerminated grain, the use of independent metabolic pathways for the synthesis of several bioactive GAs during germination, and a capacity to abort bioactive GA biosynthesis. The most abundant bioactive form is GA₁, which is synthesized in the scutellum as a glycosyl conjugate that diffuses to the aleurone, where it stimulates de novo synthesis of a GA₃ conjugate and GA₄. Synthesis of bioactive GAs in the aleurone provides a mechanism that ensures the hormonal signal is relayed from the scutellum to the distal tip of the grain. The transcript dataset of 33,421 genes used to define GA metabolism is available as a resource to analyse other physiological processes in germinated grain.Natalie S. Betts, Christoph Dockter, Oliver Berkowitz, Helen M. Collins, Michelle Hooi, Qiongxian Lu, Rachel A. Burton, Vincent Bulone, Birgitte Skadhauge, James Whelan, and Geoffrey B. Finche

    High-Risk Human Papillomavirus Detection in Urine Samples from a Referral Population with Cervical Biopsy-Proven High-Grade Lesions

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    Objective The aim of the study was to evaluate the performance of the HPV-HR test to detect high-risk human papillomavirus (HPV) in urine samples in comparison with a commercial molecular HPV test. Materials and Methods This is a prospective study, in which 350 patients diagnosed previously with cervical intraepithelial neoplasia (CIN) grade 2 or higher were enrolled. Urine and cervical specimens were collected. Urine was tested with the HPV-HR test and cervical specimens were tested with the Cobas. Results Of the 336 evaluable patients, there were 271 cases of CIN 2+, of which 202 were CIN 3+ and the remaining 65 patients were less than CIN 2. Positivity was 77.1% (95% confidence interval [CI] = 72.5-81.5) for the urine samples and 83.6% (95% CI = 79.6-87.6) for the cervical samples. Agreement between cervical and urine samples for HPV detection was 79.8% (κ = 0.363; 95% CI = 0.243-0.484). Sensitivity for CIN 2+ was 83.4% (95% CI = 78.4-87.6) for urine and 90.8% (95% CI = 86.7-92.9) for cervical samples. The sensitivity for CIN 3+ was 85.6% (95% CI = 80.0-90.2) for urine and 92.6% (95% CI = 88.0-95.8) for cervical samples. Specificity for worse than CIN 2 was 50.8% (95% CI = 33.7-59.0) and 46.2% (95% CI = 33.7-59.0) for urine and cervical samples, respectively. Conclusions Although these results demonstrated slightly higher detection rates for HR-HPV and clinical sensitivity in cervical samples than in urine, when compared with histological diagnoses, urine sampling is a viable alternative to access women who do not participate in routine screening programs

    The role of chick Ebf genes in the mediolateral patterning of the somites

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    This study was conducted to check whether the three chick Early B-cell Factor (Ebf) genes, particularly cEbf1, would be targets for Shh and Bmp signals during somites mediolateral (ML) patterning. Tissue manipulations and gain and loss of function experiments for Shh and Bmp4 were performed and the results revealed that cEbf1 expression was initiated in the cranial presomitic mesoderm by low dose of Bmp4 from the lateral mesoderm and maintained in the ventromedial part of the epithelial somite and the medial sclerotome by Shh from the notochord; while cEbf2/3 expression was induced and maintained by Bmp4 and inhibited by high dose of Shh. To determine whether Ebf1 plays a role in somite patterning, transfection of a dominant-negative construct was carried out; this showed suppression of cPax1 expression in the medial sclerotome and upregulation and medial expansion of cEbf3 and cPax3 expression in sclerotome and dermomyotome, respectively, suggesting that Ebf1 is important for ML patterning. Thus, it is possible that low doses of Bmp4 set up Ebf1 expression which, together with Shh from the notochord, leads to establishment of the medial sclerotome and suppression of lateral identities. These data also conclude that Bmp4 is required in both the medial and lateral domain of the somitic mesoderm to keep the ML identity of the sclerotome through maintenance of cEbf gene expression. These striking findings are novel and give a new insight on the role of Bmp4 on mediolateral patterning of somites

    Cure of Chronic Viral Infection and Virus-Induced Type 1 Diabetes by Neutralizing Antibodies

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    The use of neutralizing antibodies is one of the most successful methods to interfere with receptor–ligand interactions in vivo. In particular blockade of soluble inflammatory mediators or their corresponding cellular receptors was proven an effective way to regulate inflammation and/or prevent its negative consequences. However, one problem that comes along with an effective neutralization of inflammatory mediators is the general systemic immunomodulatory effect. It is, therefore, important to design a treatment regimen in a way to strike at the right place and at the right time in order to achieve maximal effects with minimal duration of immunosuppression or hyperactivation. In this review, we reflect on two examples of how short time administration of such neutralizing antibodies can block two distinct inflammatory consequences of viral infection. First, we review recent findings that blockade of IL-10/IL-10R interaction can resolve chronic viral infection and second, we reflect on how neutralization of the chemokine CXCL10 can abrogate virus-induced type 1 diabetes
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