1,040 research outputs found

    Homelessness as trauma : a theoretical analysis exploring treatment of symptoms of grief and loss in single African-American homeless women

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    The purpose of this theoretical study was to explore and describe the trauma that single homeless African-American women are at risk for before and during homelessness. Grief and loss theory and attachment theory were used to bring attention to the need of addressing traumas during homelessness. Literature was reviewed relating to exploring the areas of cross-sectional identities of race, gender and socioeconomic status within this population, historical contexts of homelessness in the U.S., and homelessness as trauma, to analyze the language used to describe the barriers in receiving treatment as a single homeless African-American woman. Through exploring these topics and their relation to single homeless African-American women, it is noticed that much research pertaining to this population carries negative and pathological tones. Social workers are challenged to consider strength-based modes of practice, as well as, develop research that gives voice to a largely unseen population

    Lock cohorting: A general technique for designing NUMA locks

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    Multicore machines are quickly shifting to NUMA and CC-NUMA architectures, making scalable NUMA-aware locking algorithms, ones that take into account the machines' non-uniform memory and caching hierarchy, ever more important. This paper presents lock cohorting, a general new technique for designing NUMA-aware locks that is as simple as it is powerful. Lock cohorting allows one to transform any spin-lock algorithm, with minimal non-intrusive changes, into scalable NUMA-aware spin-locks. Our new cohorting technique allows us to easily create NUMA-aware versions of the TATAS-Backoff, CLH, MCS, and ticket locks, to name a few. Moreover, it allows us to derive a CLH-based cohort abortable lock, the first NUMA-aware queue lock to support abortability. We empirically compared the performance of cohort locks with prior NUMA-aware and classic NUMA-oblivious locks on a synthetic micro-benchmark, a real world key-value store application memcached, as well as the libc memory allocator. Our results demonstrate that cohort locks perform as well or better than known locks when the load is low and significantly out-perform them as the load increases

    GSplit LBI: Taming the Procedural Bias in Neuroimaging for Disease Prediction

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    In voxel-based neuroimage analysis, lesion features have been the main focus in disease prediction due to their interpretability with respect to the related diseases. However, we observe that there exists another type of features introduced during the preprocessing steps and we call them "\textbf{Procedural Bias}". Besides, such bias can be leveraged to improve classification accuracy. Nevertheless, most existing models suffer from either under-fit without considering procedural bias or poor interpretability without differentiating such bias from lesion ones. In this paper, a novel dual-task algorithm namely \emph{GSplit LBI} is proposed to resolve this problem. By introducing an augmented variable enforced to be structural sparsity with a variable splitting term, the estimators for prediction and selecting lesion features can be optimized separately and mutually monitored by each other following an iterative scheme. Empirical experiments have been evaluated on the Alzheimer's Disease Neuroimaging Initiative\thinspace(ADNI) database. The advantage of proposed model is verified by improved stability of selected lesion features and better classification results.Comment: Conditional Accepted by Miccai,201

    Tuning the Level of Concurrency in Software Transactional Memory: An Overview of Recent Analytical, Machine Learning and Mixed Approaches

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    Synchronization transparency offered by Software Transactional Memory (STM) must not come at the expense of run-time efficiency, thus demanding from the STM-designer the inclusion of mechanisms properly oriented to performance and other quality indexes. Particularly, one core issue to cope with in STM is related to exploiting parallelism while also avoiding thrashing phenomena due to excessive transaction rollbacks, caused by excessively high levels of contention on logical resources, namely concurrently accessed data portions. A means to address run-time efficiency consists in dynamically determining the best-suited level of concurrency (number of threads) to be employed for running the application (or specific application phases) on top of the STM layer. For too low levels of concurrency, parallelism can be hampered. Conversely, over-dimensioning the concurrency level may give rise to the aforementioned thrashing phenomena caused by excessive data contention—an aspect which has reflections also on the side of reduced energy-efficiency. In this chapter we overview a set of recent techniques aimed at building “application-specific” performance models that can be exploited to dynamically tune the level of concurrency to the best-suited value. Although they share some base concepts while modeling the system performance vs the degree of concurrency, these techniques rely on disparate methods, such as machine learning or analytic methods (or combinations of the two), and achieve different tradeoffs in terms of the relation between the precision of the performance model and the latency for model instantiation. Implications of the different tradeoffs in real-life scenarios are also discussed

    CompNet: Complementary Segmentation Network for Brain MRI Extraction

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    Brain extraction is a fundamental step for most brain imaging studies. In this paper, we investigate the problem of skull stripping and propose complementary segmentation networks (CompNets) to accurately extract the brain from T1-weighted MRI scans, for both normal and pathological brain images. The proposed networks are designed in the framework of encoder-decoder networks and have two pathways to learn features from both the brain tissue and its complementary part located outside of the brain. The complementary pathway extracts the features in the non-brain region and leads to a robust solution to brain extraction from MRIs with pathologies, which do not exist in our training dataset. We demonstrate the effectiveness of our networks by evaluating them on the OASIS dataset, resulting in the state of the art performance under the two-fold cross-validation setting. Moreover, the robustness of our networks is verified by testing on images with introduced pathologies and by showing its invariance to unseen brain pathologies. In addition, our complementary network design is general and can be extended to address other image segmentation problems with better generalization.Comment: 8 pages, Accepted to MICCAI 201

    Variations in boundary layer stability across Antarctica: a comparison between coastal and interior sites

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    The range of boundary layer stability profiles, from the surface to 500 m a.g.l. (above ground level), present in radiosonde observations from two continental-interior (South Pole Station and Dome Concordia Station) and three coastal (McMurdo Station, Georg von Neumayer Station III, and Syowa Station) Antarctic sites, is examined using the self-organizing maps (SOMs) neural network algorithm. A wide range of potential temperature profiles is revealed, from shallow boundary layers with strong near-surface stability to deeper boundary layers with weaker or near-neutral stability, as well as profiles with weaker near-surface stability and enhanced stability aloft, above the boundary layer. Boundary layer regimes were defined based on the range of profiles revealed by the SOM analysis; 20 boundary layer regimes were identified to account for differences in stability near the surface as well as above the boundary layer. Strong, very strong, or extremely strong stability, with vertical potential temperature gradients of 5 to in excess of 30 K per 100 m, occurred more than 80 % of the time at South Pole and Dome Concordia in the winter. Weaker stability was found in the winter at the coastal sites, with moderate and strong stability (vertical potential temperature gradients of 1.75 to 15 K per 100 m) occurring 70 % to 85 % of the time. Even in the summer, moderate and strong stability is found across all five sites, either immediately near the surface or aloft, just above the boundary layer. While the mean boundary layer height at the continental-interior sites was found to be approximately 50 m, the mean boundary layer height at the coastal sites was deeper, around 110 m. Further, a commonly described two-stability-regime system in the Arctic associated with clear or cloudy conditions was applied to the 20 boundary layer regimes identified in this study to understand if the two-regime behavior is also observed in the Antarctic. It was found that moderate and strong stability occur more often with clear- than cloudy-sky conditions, but weaker stability regimes occur almost equally for clear and cloudy conditions.</p

    Regulation of lamp2a levels in the lysosomal membrane

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    The selective degradation of cytosolic proteins in lysosomes by chaperone-mediated autophagy depends, at least in part, on the levels of a substrate receptor at the lysosomal membrane. We have previously identified this receptor as the lysosome-associated membrane protein type 2a (lamp2a) and showed that levels of lamp2a at the lysosomal membrane directly correlate with the activity of the proteolytic pathway. Here we show that levels of lamp2a at the lysosomal membrane are mainly controlled by changes in its half-life and its distribution between the lysosomal membrane and the matrix. The lysosomal degradation of lamp2a requires the combined action of at least two different proteolytic activities at the lysosomal membrane. Lamp2a is released from the membrane by the action of these proteases, and then the truncated lamp2a is rapidly degraded within the lysosomal matrix. Membrane degradation of lamp2a is a regulated process that is inhibited in the presence of substrates for chaperone-mediated autophagy and under conditions that activate that type of autophagy. Uptake of substrate proteins also results in transport of some intact lamp2a from the lysosomal membrane into the matrix. This fraction of lamp2a can be reinserted back into the lysosomal membrane. The traffic of lamp2a through the lysosomal matrix is not mediated by vesicles, and lamp2a reinsertion requires the lysosomal membrane potential and protein components of the lysosomal membrane. The distribution of lamp2a between the lysosomal membrane and matrix is a dynamic process that contributes to the regulation of lysosomal membrane levels of lamp2a and consequently to the activity of the chaperone-mediated autophagic pathway

    Modelling the Distribution of 3D Brain MRI using a 2D Slice VAE

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    Probabilistic modelling has been an essential tool in medical image analysis, especially for analyzing brain Magnetic Resonance Images (MRI). Recent deep learning techniques for estimating high-dimensional distributions, in particular Variational Autoencoders (VAEs), opened up new avenues for probabilistic modeling. Modelling of volumetric data has remained a challenge, however, because constraints on available computation and training data make it difficult effectively leverage VAEs, which are well-developed for 2D images. We propose a method to model 3D MR brain volumes distribution by combining a 2D slice VAE with a Gaussian model that captures the relationships between slices. We do so by estimating the sample mean and covariance in the latent space of the 2D model over the slice direction. This combined model lets us sample new coherent stacks of latent variables to decode into slices of a volume. We also introduce a novel evaluation method for generated volumes that quantifies how well their segmentations match those of true brain anatomy. We demonstrate that our proposed model is competitive in generating high quality volumes at high resolutions according to both traditional metrics and our proposed evaluation.Comment: accepted for publication at MICCAI 2020. Code available https://github.com/voanna/slices-to-3d-brain-vae
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