Oxygen isotopic paleotemperatures across the Runangan-Whaingaroan (Eocene-Oligocene) boundary in a New Zealand shelf sequence

Oxygen isotopic compositions of the tests of mainly benthic foraminifera, from sections of conformable Late Eocene (Runangan) to Early Oligocene (Whaingaroan) shelf mudstones, at both Cape Foulwind and Port Elizabeth, western South Island, indicate that shelf sea paleotemperatures followed the global open-ocean trend towards a Paleogene minimum near the Eocene-Oligocene boundary. Throughout the latest Eocene, temperatures declined steadily by 3°C, showed a temporary minor warming at the Eocenc-Oligocene boundary, dropped sharply by 2°C in the Early Oligocene, and ameliorated significantly later in the Early Oligocene. The qualitative temperature trends for New Zealand shelf waters at this time are similar to those inferred from earlier paleontologic syntheses and limited oxygen isotopic work, but involve a range of temperatures within the warm and cool temperate climatic zones and an absolute temperature depression across the Eocene-Oligocene boundary of only 5°C from about 17 to 12°C. Results are consistent with isotopic paleotemperatures determined from deep-sea sediment cores south of New Zealand where the cooling is inferred to mark the onset of production of Antarctic bottom waters at near-freezing temperatures

Lanthanide Ionization Energies and the Sub-Shell Break. Part 2. The Third and Fourth Ionization Energies

By interpolating a 4fq6s → 4fq7s transition within the sequence f1 → f14 rather than between f0 and f14, revised third and fourth ionization energies of the lanthanides have been obtained. The revised values, together with the second ionization energies calculated in a previous paper, are used to calculate values of the standard enthalpies of formation of the gaseous tripositive ions, ΔfHƟ(M3+,g), and of the lattice and hydration enthalpies of some lanthanide compounds and ions in the trivalent and tetravalent states. The displacements of f0 values from nearly smooth f1 → f14 variations exceed 30 kJ mol-1 and indicate substantial subshell breaks

Valencies of the lanthanides

The valencies of the lanthanides vary more than was once thought. In addition to valencies associated with a half-full shell, there are valencies associated with a quarter- and three-quarter-full shell. This can be explained on the basis of Slater’s theory of many-electron atoms. The same theory explains the variation in complexing constants in the trivalent state (the “tetrad effect”). Valency in metallic and organometallic compounds is also discussed

Stratigraphy and reserves of pumiceous sand deposits in Perry's 'Asparagus Block' at Horotiu

The stratigraphic relationships between the deposits of the Hinuera Formation and the Taupo Pumice Alluvium are described over a 16 ha plot of land known as the 'Asparagus Block' at Horotiu. The Hinuera Formation is exposed at the surface at the southern end of this block, and is overlain by a wedge of Taupo Pumice Alluvium which increases in thickness from 0 to 8 m northwards across the block. Lithofacies in the Hinuera Formation are dominated by trough cross-bedded gravelly sands (lithofacies AI), with common cross-laminated sands (lithofacies B) and massive to horizontally laminated silts (lithofacies D). The pumice content of these deposits is mainly 70%. Lithofacies in the Taupo Pumice Alluvium are dominated by horizontally to inclined (tabular cross-) bedded slightly gravelly sands and sands (lithofacies G 1/2), with common occurrences of horizontally bedded to massive sandy silts (lithofacies D). The pumice content of these Taupo deposits is high, typically >80%. Cross-sections are presented showing an interpreted subsurface distribution of these lithofacies from south to north through the 'Asparagus Block'. The estimated reserve of extractable pumice sand from the block is of the order of about 400,000 to 450,000 m³

Spatial gene drives and pushed genetic waves

Gene drives have the potential to rapidly replace a harmful wild-type allele with a gene drive allele engineered to have desired functionalities. However, an accidental or premature release of a gene drive construct to the natural environment could damage an ecosystem irreversibly. Thus, it is important to understand the spatiotemporal consequences of the super-Mendelian population genetics prior to potential applications. Here, we employ a reaction-diffusion model for sexually reproducing diploid organisms to study how a locally introduced gene drive allele spreads to replace the wild-type allele, even though it possesses a selective disadvantage $s>0$. Using methods developed by N. Barton and collaborators, we show that socially responsible gene drives require $0.5<s<0.697$, a rather narrow range. In this "pushed wave" regime, the spatial spreading of gene drives will be initiated only when the initial frequency distribution is above a threshold profile called "critical propagule", which acts as a safeguard against accidental release. We also study how the spatial spread of the pushed wave can be stopped by making gene drives uniquely vulnerable ("sensitizing drive") in a way that is harmless for a wild-type allele. Finally, we show that appropriately sensitized drives in two dimensions can be stopped even by imperfect barriers perforated by a series of gaps

Critical parameters for efficient sonication and improved chromatin immunoprecipitation of high molecular weight proteins

Solubilization of cross-linked cells followed by chromatin shearing is essential for successful chromatin immunoprecipitation (ChIP). However, this task, typically accomplished by ultrasound treatment, may often become a pitfall of the process, due to inconsistent results obtained between different experiments under seemingly identical conditions. To address this issue we systematically studied ultrasound-mediated cell lysis and chromatin shearing, identified critical parameters of the process and formulated a generic strategy for rational optimization of ultrasound treatment. We also demonstrated that whereas ultrasound treatment required to shear chromatin to within a range of 100–400 bp typically degrades large proteins, a combination of brief sonication and benzonase digestion allows for the generation of similarly sized chromatin fragments while preserving the integrity of associated proteins. This approach should drastically improve ChIP efficiency for this class of proteins