1,001 research outputs found

    How Diverse Schools Affect Student Mobility: Charter, Magnet, and Newly Built Campuses in Los Angeles

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    Analyzes how student attributes, including race/ethnicity, language, and nativity, and school type (public, charter, pilot, magnet), size, and mix affect which students leave and which schools they transfer to. Considers pros and cons of student mobility

    Teacher Stability and Turnover in Los Angeles: The Influence of Teacher and School Characteristics

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    Analyzes how teacher and school characteristics - including demographics, quality and qualification, specialty, school type (public, magnet, charter) and size, academic climate, and teacher-student racial match - influence teacher turnover

    Proteins Do Not Have Strong Spines After All

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    In this issue of Structure, Berkholz et al. show that the detailed backbone geometry of proteins depends on the local conformation and suggest how this information can be practically used in modeling and refining protein structures

    N-{N-[2-(3,5-Difluoro­phenyl)acetyl]-(S)-alanyl}-(S)-phenyl­glycine tert-butyl ester (DAPT): an inhibitor of γ-secretase, revealing fine electronic and hydrogen-bonding features

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    The title compound, C23H26F2N2O4, is a dipeptidic inhibitor of γ-secretase, one of the enzymes involved in Alzheimer’s dis­ease. The mol­ecule adopts a compact conformation, without intra­molecular hydrogen bonds. In the crystal structure, one of the amide N atoms forms the only inter­molecular N—H⋯O hydrogen bond; the second amide N atom does not form hydrogen bonds. High-resolution synchrotron diffraction data permitted the unequivocal location and refinement without restraints of all H atoms, and the identification of the characteristic shift of the amide H atom engaged in the hydrogen bond from its ideal position, resulting in a more linear hydrogen bond. Significant residual densities for bonding electrons were revealed after the usual SHELXL refinement, and modeling of these features as additional inter­atomic scatterers (IAS) using the program PHENIX led to a significant decrease in the R factor from 0.0411 to 0.0325 and diminished the r.m.s. deviation level of noise in the final difference Fourier map from 0.063 to 0.037 e Å−3

    Carrying out an optimal experiment

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    Diffraction data collection parameters leading to optimal data quality are discussed in the context of different applications of these data

    SU(2) Cosmological Solitons

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    We present a class of numerical solutions to the SU(2) nonlinear σ\sigma-model coupled to the Einstein equations with cosmological constant Λ0\Lambda\geq 0 in spherical symmetry. These solutions are characterized by the presence of a regular static region which includes a center of symmetry. They are parameterized by a dimensionless ``coupling constant'' β\beta, the sign of the cosmological constant, and an integer ``excitation number'' nn. The phenomenology we find is compared to the corresponding solutions found for the Einstein-Yang-Mills (EYM) equations with positive Λ\Lambda (EYMΛ\Lambda). If we choose Λ\Lambda positive and fix nn, we find a family of static spacetimes with a Killing horizon for 0β<βmax0 \leq \beta < \beta_{max}. As a limiting solution for β=βmax\beta = \beta_{max} we find a {\em globally} static spacetime with Λ=0\Lambda=0, the lowest excitation being the Einstein static universe. To interpret the physical significance of the Killing horizon in the cosmological context, we apply the concept of a trapping horizon as formulated by Hayward. For small values of β\beta an asymptotically de Sitter dynamic region contains the static region within a Killing horizon of cosmological type. For strong coupling the static region contains an ``eternal cosmological black hole''.Comment: 20 pages, 6 figures, Revte

    Compressibility of lysozyme protein crystals by X-ray diffraction

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    Impact of synchrotron radiation on macromolecular crystallography: a personal view

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    This article, largely based on personal experiences of the authors, reviews the early history of the application of synchrotron radiation to structural biology, and particularly protein crystallography, to show the tremendous impact that this experimental innovation has had on these disciplines

    Crystal structure of the YffB protein from Pseudomonas aeruginosa suggests a glutathione-dependent thiol reductase function

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    BACKGROUND: The yffB (PA3664) gene of Pseudomonas aeruginosa encodes an uncharacterized protein of 13 kDa molecular weight with a marginal sequence similarity to arsenate reductase from Escherichia coli. The crystal structure determination of YffB was undertaken as part of a structural genomics effort in order to assist with the functional assignment of the protein. RESULTS: The structure was determined at 1.0 Å resolution by single-wavelength anomalous diffraction. The fold is very similar to that of arsenate reductase, which is an extension of the thioredoxin fold. CONCLUSION: Given the conservation of the functionally important residues and the ability to bind glutathione, YffB is likely to function as a GSH-dependent thiol reductase
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