Vortex motion in a finite-size easy-plane ferromagnet and application to a nanodot

We study the motion of a non-planar vortex in a circular easy-plane ferromagnet, which imitates a magnetic nanodot. Analysis was done using numerical simulations and a new collective variable theory which includes the coupling of Goldstone-like mode with the vortex center. Without magnetic field the vortex follows a spiral orbit which we calculate. When a rotating in-plane magnetic field is included, the vortex tends to a stable limit cycle which exists in a significant range of field amplitude B and frequency $\omega$ for a given system size L. For a fixed $\omega$, the radius R of the orbital motion is proportional to L while the orbital frequency $\Omega$ varies as 1/L and is significantly smaller than $\omega$. Since the limit cycle is caused by the interplay between the magnetization and the vortex motion, the internal mode is essential in the collective variable theory which then gives the correct estimate and dependency for the orbit radius $R\sim B L/\omega$. Using this simple theory we indicate how an ac magnetic field can be used to control vortices observed in real magnetic nanodots.Comment: 15 pages (RevTeX), 14 figures (eps

Noise-induced switching between vortex states with different polarization in classical two-dimensional easy-plane magnets

In the 2-dimensional anisotropic Heisenberg model with XY-symmetry there are non-planar vortices which exhibit a localized structure of the z-components of the spins around the vortex center. We study how thermal noise induces a transition of this structure from one polarization to the opposite one. We describe the vortex core by a discrete Hamiltonian and consider a stationary solution of the Fokker-Planck equation. We find a bimodal distribution function and calculate the transition rate using Langer's instanton theory (1969). The result is compared with Langevin dynamics simulations for the full many-spin model.Comment: 15 pages, 4 figures, Phys. Rev. B., in pres

Switching between different vortex states in 2-dimensional easy-plane magnets due to an ac magnetic field

Using a discrete model of 2-dimensional easy-plane classical ferromagnets, we propose that a rotating magnetic field in the easy plane can switch a vortex from one polarization to the opposite one if the amplitude exceeds a threshold value, but the backward process does not occur. Such switches are indeed observed in computer simulations.Comment: 4 pages, 4 figures, submitted to Phys. Rev. Let

Topological solitons in highly anisotropic two dimensional ferromagnets

e study the solitons, stabilized by spin precession in a classical two--dimensional lattice model of Heisenberg ferromagnets with non-small easy--axis anisotropy. The properties of such solitons are treated both analytically using the continuous model including higher then second powers of magnetization gradients, and numerically for a discrete set of the spins on a square lattice. The dependence of the soliton energy $E$ on the number of spin deviations (bound magnons) $N$ is calculated. We have shown that the topological solitons are stable if the number $N$ exceeds some critical value $N_{\rm{cr}}$. For $N < N_{\rm{cr}}$ and the intermediate values of anisotropy constant $K_{\mathrm{eff}} <0.35J$ ($J$ is an exchange constant), the soliton properties are similar to those for continuous model; for example, soliton energy is increasing and the precession frequency $\omega (N)$ is decreasing monotonously with $N$ growth. For high enough anisotropy $K_{\mathrm{eff}} > 0.6 J$ we found some fundamentally new soliton features absent for continuous models incorporating even the higher powers of magnetization gradients. For high anisotropy, the dependence of soliton energy E(N) on the number of bound magnons become non-monotonic, with the minima at some "magic" numbers of bound magnons. Soliton frequency $\omega (N)$ have quite irregular behavior with step-like jumps and negative values of $\omega$ for some regions of $N$. Near these regions, stable static soliton states, stabilized by the lattice effects, exist.Comment: 17 page

Internal Modes and Magnon Scattering on Topological Solitons in 2d Easy-Axis Ferromagnets

We study the magnon modes in the presence of a topological soliton in a 2d Heisenberg easy-axis ferromagnet. The problem of magnon scattering on the soliton with arbitrary relation between the soliton radius R and the "magnetic length" Delta_0 is investigated for partial modes with different values of the azimuthal quantum numbers m. Truly local modes are shown to be present for all values of m, when the soliton radius is enough large. The eigenfrequencies of such internal modes are calculated analytically on limiting case of a large soliton radius and numerically for arbitrary soliton radius. It is demonstrated that the model of an isotropic magnet, which admits an exact analytical investigation, is not adequate even for the limit of small radius solitons, R<<Delta_0: there exists a local mode with nonzero frequency. We use the data about local modes to derive the effective equation of soliton motion; this equation has the usual Newtonian form in contrast to the case of the easy-plane ferromagnet. The effective mass of the soliton is found.Comment: 33 pages (REVTeX), 12 figures (EPS

Critical dynamics in the 2d classical XY-model: a spin dynamics study

Using spin-dynamics techniques we have performed large-scale computer simulations of the dynamic behavior of the classical three component XY-model (i.e. the anisotropic limit of an easy-plane Heisenberg ferromagnet), on square lattices of size up to 192^2, for several temperatures below, at, and above T_KT. The temporal evolution of spin configurations was determined numerically from coupled equations of motion for individual spins by a fourth order predictor-corrector method, with initial spin configurations generated by a hybrid Monte Carlo algorithm. The neutron scattering function S(q,omega) was calculated from the resultant space-time displaced spin-spin correlation function. Pronounced spin-wave peaks were found both in the in-plane and the out-of-plane scattering function over a wide range of temperatures. The in-plane scattering function S^xx also has a large number of clear but weak additional peaks, which we interpret to come from two-spin-wave scattering. In addition, we observed a small central peak in S^xx, even at temperatures well below the phase transition. We used dynamic finite size scaling theory to extract the dynamic critical exponent z. We find z=1.00(4) for all T <= T_KT, in excellent agreement with theoretical predictions, although the shape of S(q,omega) is not well described by current theory.Comment: 31 pages, LaTex, 13 figures (38 subfigures) included as eps-files, needs psfig, 260 K

Recent Developments of World-Line Monte Carlo Methods

World-line quantum Monte Carlo methods are reviewed with an emphasis on breakthroughs made in recent years. In particular, three algorithms -- the loop algorithm, the worm algorithm, and the directed-loop algorithm -- for updating world-line configurations are presented in a unified perspective. Detailed descriptions of the algorithms in specific cases are also given.Comment: To appear in Journal of Physical Society of Japa

The nucleotide addition cycle of RNA polymerase is controlled by two molecular hinges in the Bridge Helix domain

Abstract Background Cellular RNA polymerases (RNAPs) are complex molecular machines that combine catalysis with concerted conformational changes in the active center. Previous work showed that kinking of a hinge region near the C-terminus of the Bridge Helix (BH-HC) plays a critical role in controlling the catalytic rate. Results Here, new evidence for the existence of an additional hinge region in the amino-terminal portion of the Bridge Helix domain (BH-HN) is presented. The nanomechanical properties of BH-HN emerge as a direct consequence of the highly conserved primary amino acid sequence. Mutations that are predicted to influence its flexibility cause corresponding changes in the rate of the nucleotide addition cycle (NAC). BH-HN displays functional properties that are distinct from BH-HC, suggesting that conformational changes in the Bridge Helix control the NAC via two independent mechanisms. Conclusions The properties of two distinct molecular hinges in the Bridge Helix of RNAP determine the functional contribution of this domain to key stages of the NAC by coordinating conformational changes in surrounding domains.</p