27,864 research outputs found
Between fetishism and survival : is the scientific article an academic commodity?
This article discusses the possible meanings of the intense prevailing concern in academic circles over the notion of research productivity, as reflected in an excess number of articles published in various scientific journals. The numerical accounting of articles published by researchers in scientific journals with renowned academic status serves to legitimize academics in their fields of work, in various ways. In this sense, we suggest that scientific articles take on aspects of merchandise-as-fetish, according to Marx's theory of use-value and exchange-value and Benjamin's exposure value. Meanwhile, the biological notions of selection and evolution are used as metaphorical elements in "bibliographic Darwinism". There are references as to the possibility many of the prevailing bibliometric concerns serve as instruments for econometric analysis, especially to orient and enhance cost-effectiveness analysis in research investments of various orders and types, from the point of view of their economic return
Understanding the Evolutionary Relationships and Major Traits of \u3cem\u3eBacillus\u3c/em\u3e through Comparative Genomics
Background: The presence of Bacillus in very diverse environments reflects the versatile metabolic capabilities of a widely distributed genus. Traditional phylogenetic analysis based on limited gene sampling is not adequate for resolving the genus evolutionary relationships. By distinguishing between core and pan-genome, we determined the evolutionary and functional relationships of known Bacillus.
Results: Our analysis is based upon twenty complete and draft Bacillus genomes, including a newly sequenced Bacillus isolate from an aquatic environment that we report for the first time here. Using a core genome, we were able to determine the phylogeny of known Bacilli, including aquatic strains whose position in the phylogenetic tree could not be unambiguously determined in the past. Using the pan-genome from the sequenced Bacillus, we identified functional differences, such as carbohydrate utilization and genes involved in signal transduction, which distinguished the taxonomic groups. We also assessed the genetic architecture of the defining traits of Bacillus, such as sporulation and competence, and showed that less than one third of the B. subtilis genes are conserved across other Bacilli. Most variation was shown to occur in genes that are needed to respond to environmental cues, suggesting that Bacilli have genetically specialized to allow for the occupation of diverse habitats and niches.
Conclusions: The aquatic Bacilli are defined here for the first time as a group through the phylogenetic analysis of 814 genes that comprise the core genome. Our data distinguished between genomic components, especially core vs. pan-genome to provide insight into phylogeny and function that would otherwise be difficult to achieve. A phylogeny may mask the diversity of functions, which we tried to uncover in our approach. The diversity of sporulation and competence genes across the Bacilli was unexpected based on previous studies of the B. subtilis model alone. The challenge of uncovering the novelties and variations among genes of the non-subtilis groups still remains. This task will be best accomplished by directing efforts toward understanding phylogenetic groups with similar ecological niches
Winnerless competition in coupled Lotka-Volterra maps
Winnerless competition is analyzed in coupled maps with discrete temporal evolution of the Lotka-Volterra type of arbitrary dimension. Necessary and sufficient conditions for the appearance of structurally stable heteroclinic cycles as a function of the model parameters are deduced. It is shown that under such conditions winnerless competition dynamics is fully exhibited. Based on these conditions different cases characterizing low, intermediate, and high dimensions are therefore computationally recreated. An analytical expression for the residence times valid in the N-dimensional case is deduced and successfully compared with the simulations.J.L.C. and E.D.G. acknowledge support from IVIC-141, L.A.G.-D. acknowledges support from IVIC-1089 and P.V. acknowledges support from MINECO TIN2012-30883
Gender and innovation processes in rice-based systems
This GRiSP report is based on the perspectives of women and men from three rice-growing villages in the Nueva Ecija province of the Philippines
Flow Motifs Reveal Limitations of the Static Framework to Represent Human interactions
Networks are commonly used to define underlying interaction structures where
infections, information, or other quantities may spread. Although the standard
approach has been to aggregate all links into a static structure, some studies
suggest that the time order in which the links are established may alter the
dynamics of spreading. In this paper, we study the impact of the time ordering
in the limits of flow on various empirical temporal networks. By using a random
walk dynamics, we estimate the flow on links and convert the original
undirected network (temporal and static) into a directed flow network. We then
introduce the concept of flow motifs and quantify the divergence in the
representativity of motifs when using the temporal and static frameworks. We
find that the regularity of contacts and persistence of vertices (common in
email communication and face-to-face interactions) result on little differences
in the limits of flow for both frameworks. On the other hand, in the case of
communication within a dating site (and of a sexual network), the flow between
vertices changes significantly in the temporal framework such that the static
approximation poorly represents the structure of contacts. We have also
observed that cliques with 3 and 4 vertices con- taining only low-flow links
are more represented than the same cliques with all high-flow links. The
representativity of these low-flow cliques is higher in the temporal framework.
Our results suggest that the flow between vertices connected in cliques depend
on the topological context in which they are placed and in the time sequence in
which the links are established. The structure of the clique alone does not
completely characterize the potential of flow between the vertices
Radio jets in colliding galaxies: Testing the interaction-activity connection
The idea that galaxy interactions and merging are related to the generation of starburst and AGN activity in galactic nuclei has been the subject of intensive investigations over the past several years and is still a matter of lively debate. Peculiar morphologies, indicative of tidal interactions, have been detected in high-luminosity radio galaxies, in quasars, and in ultraluminous IRAS galaxies. In addition, low-luminosity radio and active galaxies show similar evidence for a recent merger or for nearby companions. In a recent CCD optical study of galaxies selected on the basis that they all contain well defined radio jets, it was found that almost half of the sample consists of pairs of elliptical galaxies. Many of these low-luminosity radio galaxies with companions show a well defined distorted radio jet structure at the VLA scale with an S- or C-shaped morphology. We have developed a general numerical simulation algorithm for ballistic radio jets with the intention of applying this model to the study of the bent jets seen in colliding pairs of galaxies and with the hope of testing the well documented interaction-activity connection. In our model the morphological evolution of the jets is determined by their response to the simple mechanical forces (i.e., gravity and ram pressure) imposed on them from both the host and the companion galaxies. Radiative losses, jet precession, magnetic effects, relativistic terms, and hydrodynamic instabilities have all been ignored. Starting with a previously derived collision model for the interacting pair of elliptical galaxies NGC 4782/4783, we have used our algorithm to simulate the specific two-sided jet morphology seen in the radio source 3C 278, associated with NGC 4782. This is the first time that such jet simulations have been produced for a galaxy pair whose relative orbit was determined independently from the jet modeling
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