An Efficient Implementation of the Gauss-Newton Method Via Generalized Krylov Subspaces

The solution of nonlinear inverse problems is a challenging task in numerical analysis. In most cases, this kind of problems is solved by iterative procedures that, at each iteration, linearize the problem in a neighborhood of the currently available approximation of the solution. The linearized problem is then solved by a direct or iterative method. Among this class of solution methods, the Gauss-Newton method is one of the most popular ones. We propose an efficient implementation of this method for large-scale problems. Our implementation is based on projecting the nonlinear problem into a sequence of nested subspaces, referred to as Generalized Krylov Subspaces, whose dimension increases with the number of iterations, except for when restarts are carried out. When the computation of the Jacobian matrix is expensive, we combine our iterative method with secant (Broyden) updates to further reduce the computational cost. We show convergence of the proposed solution methods and provide a few numerical examples that illustrate their performance

Quinolone Resistance Reversion by Targeting the SOS Response

Suppression of the SOS response has been postulated as a therapeutic strategy for potentiating antimicrobial agents. We aimed to evaluate the impact of its suppression on reversing resistance using a model of isogenic strains of Escherichia coli representing multiple levels of quinolone resistance. E. coli mutants exhibiting a spectrum of SOS activity were constructed from isogenic strains carrying quinolone resistance mechanisms with susceptible and resistant phenotypes. Changes in susceptibility were evaluated by static (MICs) and dynamic (killing curves or flow cytometry) methodologies. A peritoneal sepsis murine model was used to evaluate in vivo impact. Suppression of the SOS response was capable of resensitizing mutant strains with genes encoding three or four different resistance mechanisms (up to 15-fold reductions in MICs). Killing curve assays showed a clear disadvantage for survival (Δlog10 CFU per milliliter [CFU/ml] of 8 log units after 24 h), and the in vivo efficacy of ciprofloxacin was significantly enhanced (Δlog10 CFU/g of 1.76 log units) in resistant strains with a suppressed SOS response. This effect was evident even after short periods (60 min) of exposure. Suppression of the SOS response reverses antimicrobial resistance across a range of E. coli phenotypes from reduced susceptibility to highly resistant, playing a significant role in increasing the in vivo efficacy

Investigaciones de factores asociados: ¿con cuál “desempeño” hacer las comparaciones?

During 2007, Corpoeducación and Luker, Carvajal, Crown and Genesis foundations have developed the research: “Design, pilotage and adjustment of an instrument of associated factors to the quality of the students educative processes”., A conceptual frame was elaborated for; some indicators were built to designinstruments intended for students, teachers, directors and parents; the instruments were piloted in 42 educational institutions of Barranquilla, Bogota, Buenaventura, Cali and Manizales. The analysis demonstrated that itis not possible to affect the performance of the students considering only one aspect, ignoring the others; also that -based on its own responsibilities- each instance decides according to the particularities of its reality and that the different ways to appreciate the performance are all legitimate.Corpoeducación y las fundaciones Luker, Carvajal, Corona y Génesis desarrollaron durante el 2007 la investigación llamada “Diseño, pilotaje y ajuste de un instrumento de factores asociados a la calidad de los procesos educativos de los estudiantes”. Para ello, se elaboró un referente conceptual; se construyeron indicadores para diseñar instrumentos dirigidos a estudiantes, docentes, rectores y padres de familia; se pilotearon los instrumentos en 42 instituciones educativas de Barranquilla, Bogotá, Buenaventura, Cali y Manizales. El análisis mostró que no es posible incidir en el desempeño de los estudiantes mediante la afectación de un aspecto haciendo caso omiso de los demás; que en función de sus responsabilidades, cada instancia decide frente a las particularidades de su realidad y que las distintas formas de apreciar el desempeño son todas legítimas

Superconducting nitridized-aluminum thin films

We report the direct observation of superconductivity in nitridized-aluminum thin films. The films are produced by sputtering deposition of aluminum in a controlled mixture of nitrogen diluted in argon. The concentration of applied nitrogen directly determines the properties of the superconducting thin films. We observe samples displaying critical temperatures up to 3.38 ± 0.01 K and resilience to in-plane magnetic fields well above 1 T, with good reproducibility of the results. This work represents an unambiguous demonstration of tunable superconductivity in aluminum-based nitridized thin films. Our results put forward nitridized aluminum as a promising material to be employed in superconducting quantum circuits for quantum technology applications

Análisis aerobiológico del polen de Cupressaceae en Granada (sureste P. Ibérica): su repercusión en la población atópica

XV lnternational A.P.L.E. Symposium of Palynolog

Soft corals assemblages in deep environments of the Menorca Channel (Western Mediterranean Sea)

Image-based research in mesophotic and deep environments of the Mediterranean Sea has significantly increased during the past decades. So far, this research has been focused on the ecology of key structuring organisms such as scleractinians, antipatharians, gorgonians or large demosponges. However, the ecology of true soft corals has barely been studied and is still in a very preliminary stage. To overcome this situation, soft coral assemblages in shelf and slope environments of the Menorca Channel (Western Mediterranean Sea) have been studied through the quantitative analysis of 85 video transect recorded over 38500 m2. Highest soft coral diversity was encountered on the shelf edge, resembling deep Mediterranean gorgonian patterns. Three soft coral assemblages, segregated by depth, substrate, and slope were identified: two monospecific ones composed by Nidalia studeriand Alcyonium palmatum, respectively and a multispecific one composed by Paralcyonium spinulosum, Alcyonium sp., Chironephthya mediterranea and Daniela koreni. The evaluated species presented average densities within the same range as other deep Mediterranean anthozoans ranging from 1 to 9 col.·m−2. However, N. studeri and P. spinulosum punctually formed dense monospecific aggregations, reaching maximum densities of 49 col.·m−2 and 60 col.·m−2 respectively. Both species monopolized vast extensions of the continental shelf and shelf edge. The identification and ecological characterization of these assemblages brings new insight about deep Mediterranean anthozoan communities, and provides baseline for future management plans in the study area.En prensa3,26

Análisis y tendencias del polen de Chenopodiáceas-Amarantáceas en la atmósfera de cuatro ciudades del sur de España

XV lnternational A.P.L.E. Symposium of Palynolog

Palaeoecological data indicates land-use changes across Europe linked to spatial heterogeneity in mortality during the Black Death pandemic

The Black Death (1347-1352 CE) is the most renowned pandemic in human history, believed by many to have killed half of Europe's population. However, despite advances in ancient DNA research that conclusively identified the pandemic's causative agent (bacterium Yersinia pestis), our knowledge of the Black Death remains limited, based primarily on qualitative remarks in medieval written sources available for some areas of Western Europe. Here, we remedy this situation by applying a pioneering new approach, 'big data palaeoecology', which, starting from palynological data, evaluates the scale of the Black Death's mortality on a regional scale across Europe. We collected pollen data on landscape change from 261 radiocarbon-dated coring sites (lakes and wetlands) located across 19 modern-day European countries. We used two independent methods of analysis to evaluate whether the changes we see in the landscape at the time of the Black Death agree with the hypothesis that a large portion of the population, upwards of half, died within a few years in the 21 historical regions we studied. While we can confirm that the Black Death had a devastating impact in some regions, we found that it had negligible or no impact in others. These inter-regional differences in the Black Death's mortality across Europe demonstrate the significance of cultural, ecological, economic, societal and climatic factors that mediated the dissemination and impact of the disease. The complex interplay of these factors, along with the historical ecology of plague, should be a focus of future research on historical pandemics.The authors acknowledge the following funding sources: Max Planck Independent Research Group, Palaeo-Science and History Group (A.I., A.M. and C.V.); Estonian Research Council #PRG323, PUT1173 (A.Pos., T.R., N.S. and S.V.); European Research Council #FP7 263735 (A.Bro. and A.Plu.), #MSC 655659 (A.E.); Georgetown Environmental Initiative (T.N.); Latvian Council of Science #LZP-2020/2-0060 (N.S. and N.J.); LLNL-JRNL-820941 (I.T.); NSF award #GSS-1228126 (S.M.); Polish-Swiss Research Programme #013/2010 CLIMPEAT (M.Lam.), #086/2010 CLIMPOL (A.W.); Polish Ministry of Science and Higher Education #N N306 275635 (M.K.); Polish National Science Centre #2019/03/X/ST10/00849 (M.Lam.), #2015/17/B/ST10/01656 (M.Lam.), #2015/17/B/ST10/03430 (M.Sło.), #2018/31/B/ST10/02498 (M.Sło.), #N N304 319636 (A.W.); SCIEX #12.286 (K.Mar.); Spanish Ministry of Economy and Competitiveness #REDISCO-HAR2017-88035-P (J.A.L.S.); Spanish Ministry of Education, Culture and Sports #FPU16/00676 (R.L.L.); Swedish Research Council #421-2010-1570 (P.L.), #2018-01272 (F.C.L. and A.S.); Volkswagen Foundation Freigeist Fellowship Dantean Anomaly (M.B.), Spanish Ministry of Science and Innovation #RTI2018-101714-B-I00 (F.A.S. and D.A.S.), OP RDE, MEYS project #CZ.02.1.01/0.0/0.0/16_019/0000728 (P.P.

Calibration and Characterization of the IceCube Photomultiplier Tube

Over 5,000 PMTs are being deployed at the South Pole to compose the IceCube neutrino observatory. Many are placed deep in the ice to detect Cherenkov light emitted by the products of high-energy neutrino interactions, and others are frozen into tanks on the surface to detect particles from atmospheric cosmic ray showers. IceCube is using the 10-inch diameter R7081-02 made by Hamamatsu Photonics. This paper describes the laboratory characterization and calibration of these PMTs before deployment. PMTs were illuminated with pulses ranging from single photons to saturation level. Parameterizations are given for the single photoelectron charge spectrum and the saturation behavior. Time resolution, late pulses and afterpulses are characterized. Because the PMTs are relatively large, the cathode sensitivity uniformity was measured. The absolute photon detection efficiency was calibrated using Rayleigh-scattered photons from a nitrogen laser. Measured characteristics are discussed in the context of their relevance to IceCube event reconstruction and simulation efforts.Comment: 40 pages, 12 figure

Estimating how inflated or obscured effects of climate affect forecasted species distribution

Climate is one of the main drivers of species distribution. However, as different environmental factors tend to co-vary, the effect of climate cannot be taken at face value, as it may be either inflated or obscured by other correlated factors. We used the favourability models of four species (Alytes dickhilleni, Vipera latasti, Aquila fasciata and Capra pyrenaica) inhabiting Spanish mountains as case studies to evaluate the relative contribution of climate in their forecasted favourability by using variation partitioning and weighting the effect of climate in relation to non-climatic factors. By calculating the pure effect of the climatic factor, the pure effects of non-climatic factors, the shared climatic effect and the proportion of the pure effect of the climatic factor in relation to its apparent effect (r), we assessed the apparent effect and the pure independent effect of climate. We then projected both types of effects when modelling the future favourability for each species and combination of AOGCM-SRES (two Atmosphere-Ocean General Circulation Models: CGCM2 and ECHAM4, and two Special Reports on Emission Scenarios (SRES): A2 and B2). The results show that the apparent effect of climate can be either inflated (overrated) or obscured (underrated) by other correlated factors. These differences were species-specific; the sum of favourable areas forecasted according to the pure climatic effect differed from that forecasted according to the apparent climatic effect by about 61% on average for one of the species analyzed, and by about 20% on average for each of the other species. The pure effect of future climate on species distributions can only be estimated by combining climate with other factors. Transferring the pure climatic effect and the apparent climatic effect to the future delimits the maximum and minimum favourable areas forecasted for each species in each climate change scenario.Ministerio de Ciencia e Innovación and FEDER (project CGL2009-11316/BOS). D. Romero is a PhD student at the University of Malaga with a grant of the Ministerio de Educacio´n y Ciencia (AP 2007-03633