142 research outputs found
Cell resolved, multiparticle model of plastic tissue deformations and morphogenesis
We propose a three-dimensional mechanical model of embryonic tissue dynamics. Mechanically coupled adherent cells are represented as particles interconnected with elastic beams which can exert non-central forces and torques. Tissue plasticity is modeled by a stochastic process consisting of a connectivity change (addition or removal of a single link) followed by a complete relaxation to mechanical equilibrium. In particular, we assume that (i) two non-connected, but adjacent particles can form a new link; and (ii) the lifetime of links is reduced by tensile forces. We demonstrate that the proposed model yields a realistic macroscopic elasto-plastic behavior and we establish how microscopic model parameters determine material properties at the macroscopic scale. Based on these results, microscopic parameter values can be inferred from tissue thickness, macroscopic elastic modulus and the magnitude and dynamics of intercellular adhesion forces. In addition to their mechanical role, model particles can also act as simulation agents and actively modulate their connectivity according to specific rules. As an example, anisotropic link insertion and removal probabilities can give rise to local cell intercalation and large scale convergent extension movements. The proposed stochastic simulation of cell activities yields fluctuating tissue movements which exhibit the same autocorrelation properties as empirical data from avian embryos
Collective cell streams in epithelial monolayers depend on cell adhesion
We report spontaneously emerging, randomly oriented, collective streaming behavior within a monolayer culture of a human keratinocyte cell line, and explore the effect of modulating cell adhesions by perturbing the function of calcium-dependent cell adhesion molecules. We demonstrate that decreasing cell adhesion induces narrower and more anisotropic cell streams, reminiscent of decreasing the Taylor scale of turbulent liquids. To explain our empirical findings, we propose a cell-based model that represents the dual nature of cell-cell adhesions. Spring-like connections provide mechanical stability, while a cellular Potts model formalism represents surface-tension driven attachment. By changing the relevance and persistence of mechanical links between cells, we are able to explain the experimentally observed changes in emergent flow patterns
Culturing of avian embryos for time-lapse imaging
Monitoring morphogenetic processes, at high resolution over time, has been a longstanding goal of many developmental cell biologists. It is critical to image cells in their natural environment whenever possible; however imaging many warm-blooded vertebrates, especially mammals, is problematic. At early stages of development, birds are ideal for imaging, since the avian body plan is very similar to that of mammals. We have devised a culturing technique that allows for the acquisition of high-resolution differential interference contrast and epifluorescence images of developing avian embryos in a 4-D (3-D + time) system. The resulting information, from intact embryos, is derived from an area encompassing several millimeters, at micrometer resolution for up to 30 h
Statistical Mechanics of Canonical-Dissipative Systems and Applications to Swarm Dynamics
We develop the theory of canonical-dissipative systems, based on the
assumption that both the conservative and the dissipative elements of the
dynamics are determined by invariants of motion. In this case, known solutions
for conservative systems can be used for an extension of the dynamics, which
also includes elements such as the take-up/dissipation of energy. This way, a
rather complex dynamics can be mapped to an analytically tractable model, while
still covering important features of non-equilibrium systems. In our paper,
this approach is used to derive a rather general swarm model that considers (a)
the energetic conditions of swarming, i.e. for active motion, (b) interactions
between the particles based on global couplings. We derive analytical
expressions for the non-equilibrium velocity distribution and the mean squared
displacement of the swarm. Further, we investigate the influence of different
global couplings on the overall behavior of the swarm by means of
particle-based computer simulations and compare them with the analytical
estimations.Comment: 14 pages incl. 13 figures. v2: misprints in Eq. (40) corrected, ref.
updated. For related work see also:
http://summa.physik.hu-berlin.de/~frank/active.htm
A Dynamic Renormalization Group Study of Active Nematics
We carry out a systematic construction of the coarse-grained dynamical
equation of motion for the orientational order parameter for a two-dimensional
active nematic, that is a nonequilibrium steady state with uniaxial, apolar
orientational order. Using the dynamical renormalization group, we show that
the leading nonlinearities in this equation are marginally \textit{irrelevant}.
We discover a special limit of parameters in which the equation of motion for
the angle field of bears a close relation to the 2d stochastic Burgers
equation. We find nevertheless that, unlike for the Burgers problem, the
nonlinearity is marginally irrelevant even in this special limit, as a result
of of a hidden fluctuation-dissipation relation. 2d active nematics therefore
have quasi-long-range order, just like their equilibrium counterpartsComment: 31 pages 6 figure
Network formation of tissue cells via preferential attraction to elongated structures
Vascular and non-vascular cells often form an interconnected network in
vitro, similar to the early vascular bed of warm blooded embryos. Our
time-lapse recordings show that the network forms by extending sprouts, i.e.,
multicellular linear segments. To explain the emergence of such structures, we
propose a simple model of preferential attraction to stretched cells. Numerical
simulations reveal that the model evolves into a quasi-stationary pattern
containing linear segments, which interconnect above the critical volume
fraction of 0.2. In the quasi-stationary state the generation of new branches
offset the coarsening driven by surface tension. In agreement with empirical
data, the characteristic size of the resulting polygonal pattern is
density-independent within a wide range of volume fractions
- …