Influence de l'arrangement granulaire d'un sédiment polydisperses sur le seuil de mise en mouvement

La prédiction du transport d'un mélange de particules de plusieurs tailles est un point sensible d'une représentation de la dynamique sédimentaire sur de nombreux faciès en rivière ou en mer. Afin de déterminer les processus critiques qui régissent la mise en mouvement de tels mélanges et de quantifier leur contributions, des essais ont été réalisés dans un petit canal à courant. Ils ont porté sur des échantillons reconstitués, formés de sables naturels lithoclastiques bien triés ou de mélanges sableux bimodaux. L'objectif est d'observer et de quantifier les différences de comportement à l'entrainement entre un sédiment unimodal et un sédiment mélangé. Les résultats obtenus sont comparés à une sélection de formulations issues de la littérature. La série de tests a permis de mettre en évidence quelques processus particuliers du début du transport sédimentaire multiclasse dans un écoulement stationnaire. La granulométrie utilisée s'étend des sables fins aux sables très grossiers. Des paramètres du mélange tels que le rapport de taille des particules, le taux de saturation des échantillons par les grains dont la taille est la plus fine ou la porosité influent sur la modulation de la contrainte de frottement critique. Les comparaisons mesures / formules ont mis en évidence la difficulté de prédire le seuil de mise en mouvement des particules d'un mélange hétérométrique. Par conséquent, l'incertitude sur la granulométrie transportée s'accroît lorsque le frottement est proche du frottement critique d'une certaine classe de taille

Ecosystem modelling to assess the impact of rearing density, environment variability and mortality on oyster production

The natural productivity of ecosystems, farming practices and mortality events drive the rearing density and growth of oysters in shellfish farming areas. The variability of these drivers, which can be of natural or anthropic origin, is therefore an important source of variation in the growth performance and production of shellfish. Knowledge of these variabilities and their relative importance help producers to anticipate their effects and adapt aquaculture practices in order to limit negative impacts and guarantee a constant, or at least acceptable, level of production. In this paper, we implement a 3D model coupling hydrodynamics, primary production and individual growth to predict oyster growth and production in Bourgneuf Bay (French Atlantic coast). We set up numerous scenarios to compare and hierarchize the impacts of aquaculture practices, environmental variability and mortality events on shellfish production. Our results allowed us to propose a simplified management tool, in the form of response functions, to optimize shellfish farming practices interannually. This tool will help shellfish farmers quickly recover production levels in response to variations in mortality and/or environmental conditions

Three dimensional (3D) ecological modelling of the "baie de Seine" (English Channel, France)

A three dimensional (3D) ecological model is developed and applied to the "baie de Seine" area. It consists of a 3D model for hydrodynamics and port (SiAM3D) coupled to an ecological model simulating nutrient cycles (nitrogen, phosphorus, silicon) and two phytoplanktonic classes (diatoms and flagellates). The model is validated by confronting simulations with nine year long series of measurements and then used to better understand the ecosystem functioning. It especially allows to show the role of the proportion of silicon with regard to nitrogen and phosphorus in the summer loadings of the Seine river on the more or less strong presence of flagellates in the river plume. The model was also used to test various hypotheses of reduction of nitrogen loading from the Seine river and their consequences on the phytoplanktonic production in the plume.Une modélisation écologique tri-dimensionelle (3D) a été développée en baie de Seine. Elle est constituée d'un modèle 3D hydrosédimentaire (SiAM3D) couplé à un modèle écologique simulant le cycle des éléments nutritifs (azote, phosphore, silicium) et deux classes phytoplanctoniques (diatomées et flagellés). Après validation par confrontation des simulations avec neuf années de mesures, le modèle a été utilisé afin de mieux comprendre le fonctionnement de l'écosystème. II a notamment permis de montrer le rôle de la proportion de silice par rapport à l'azote et au phosphore dans les apports estivaux de la Seine sur la présence plus ou moins forte de flagellés dans le panache du fleuve. Le modèle a également été utilisé pour tester différentes hypothèses de réduction des apports d'azote par la Seine et leurs conséquences sur la production phytoplanctonique dans le panache

Modelling the spatial heterogeneity of ecological processes in an intertidal estuarine bay: dynamic interactions between bivalves and phytoplankton

Spatial patterns in ecological communities result from a combination of physical and biological factors. In an estuarine intertidal bay, spatial differences have been found in the structure of phytoplanktonic communities and in the biological performance of cultivated oysters. It has been hypothesised that trophic heterogeneity exists, although the mechanisms controlling it remain undefined. Spatial and temporal interactions in the structure of phytoplanktonic biomass and in the biological performance of cultivated oysters were highlighted in this estuarine intertidal bay using a 2-dimensional hydrodynamic model coupled to a nutrient-phytoplankton-zooplankton bivalve food web model. The coupled models allowed a reproduction in space and time of variations in the main variables (i.e. nutrients, chlorophyll a (chl a) and bivalve growth and reproduction). Spatial patterns of chl a at the bay scale showed a dichotomy between the eastern and western parts of the bay, with a sharp drop in concentrations above the oyster area. At the smallest scale, significant spatial heterogeneity was obtained in terms of oyster dry weight (DW), with a difference of around 3.0 g between the lowest and the highest oyster DW. Influences of physical and biological factors were discriminated for spatial patterns of phytoplankton at a large scale and for spatial patterns of bivalves at a small scale. Bivalve density, immersion time (i.e. feeding time) and current velocity were identified as the main factors controlling the spatial patterns of phytoplankton and bivalve growth. The results of the model indicate that the effects of spatial scales are much larger than those of temporal scales; this conclusion differs from that expected through observations only. Top-down effects of oysters on phytoplankton biomass at local scales were revealed, whereas bottom-up effects drove primary productivity at the whole bay scale. In general, we conclude that spatial modelling is particularly appropriate to reveal spatial properties which would be difficult to observe directly. Knowledge of ecosystem functioning would be enhanced accordingly

Influence of Crepidula fornicata on suspended particle dynamics in coastal systems: a mesocosm experimental study

In coastal environments, strong feedback can exist between benthic fauna and sediment dynamics. Benthic populations can modify sediment dynamics through biofiltration and bioturbation, while hydro- and sediment dynamics directly determine local environmental conditions for benthic organisms. However, these complex feedbacks are difficult to study in situ. Here, we carried out mesocosm experiments to characterize the effects of a benthic species (the gastropod Crepidula fornicata) on mud dynamics under hydrodynamic conditions representative of their natural habitat. Different experimental tests related to the inclusion (or not) of dead or live crepidula reveal that biofiltration can increase particle settling up to 40%. Flocculation, which is strengthened by organic matter enrichment in shell beds, also substantially increases particle settling. Thus, both processes enhance sedimentation above live crepidula habitats. Furthermore, these experiments highlight serious technical, physical and biological challenges that have to be tackled for properly investigating bio-physical interactions

Large-scale patterns of river inputs in southwestern Europe: seasonal and interannual variations and potential eutrophication effects at the coastal zone

International audienceWe provide data on nutrient export for 28 rivers in southwestern Europe and analyze long-term changes in the context of anthropogenic pressures and regulation policies. Special attention is given to seasonal variations, because the integrated annual values that are usually provided do not allow us to establish comparisons with seasonal phytoplankton dynamics. The eutrophication risk associated with river inputs is addressed by means of an indicator (Index of Coastal Eutrophication Potential, ICEP, Billen and Garnier, Mar Chem 106:148-160, 2007). An overview of the temporal evolution and the intra-annual variability of the ICEP is discussed for specific rivers and integrated coastal regions. The annual dynamics of the eutrophication indicator is analyzed to delimit those periods when the risk of eutrophication is particularly high. The trends in nutrient fluxes and coastal phytoplankton are compared by means of a case study (Seine Bay). The decrease in phosphorus matches a general decrease in phytoplankton biomass in the summer. However, sustained high values of nitrogen still foster the emergence of harmful algal blooms, and we found an increase in the summer abundance of dinoflagellates. The abatement of phosphorus alone is not enough to shortcut harmful blooms and toxic outbreaks in the Seine Bay. A reduction in nitrogen inputs may be necessary to effectively minimize eutrophication problems

Potential impact of photoinhibition on microphytobenthic primary production on a large intertidal mudflat

Microphytobenthos (MPB) are a key primary producer of intertidal mudflats. MPB face strong variability in incident irradiance during low tides. Despite photoprotection and photoacclimation, such variations can translate into photoinhibition of MPB cells. This study explores the effect of photoinhibition on MPB primary production (PP) over a large and productive temperate mudflat (Brouage mudflat, NW France). We used a regional and high-resolution tri-dimensional hydrodynamic model coupled to a MPB model with or without photoinhibition. Photoinhibition leads to a 20% (-0.79 t C) decrease of the simulated MPB PP over the entire mudflat. As the upper shore is exposed to light more frequently and longer than the lower shore, the decrease of MPB PP is higher on the upper shore (-29%) than on the lower shore (-5%). With the highest photosynthetically active radiation cumulated over the mudflat, the decrease of MPB PP due to photoinhibition is the highest during spring and spring tides (-22% and -23%, respectively). The model suggests MPB photoinhibition is sensitive to the photoacclimation status of MPB cells through the light saturation parameter. This first modeling attempt to account for MPB photoinhibition is highly constrained by our current theoretical knowledge and limitations on the MPB growth physiology, but it suggests that this process can have a substantial impact on the MPB PP. As such, assessing the MPB photosynthetic response to the highly variable environmental conditions that prevail in large and productive intertidal mudflats is a real challenge for quantifying MPB PP from a synoptic to inter-annual time scale. Plain Language Summary Benthic micro-algae or microphytobenthos (MPB) inhabiting the surficial sediment sustain the high biological production of intertidal mudflats. MPB achieve photosynthesis by aggregating into a dense biofilm at the mud surface during daytime low tides. As MPB can be exposed to short-term variations and high light levels, they change their short-term physiology and position within the sediment to protect themselves. However, such strategies can be outbalanced by a too long stressful light exposure. In this study, we explore with a numerical model the impact of photoinhibition on MPB primary production (PP) over a large and very productive mudflat (NW France). The model suggests that photoinhibition can strongly impact MPB PP. With photoinhibition, the yearly PP decreases by 20 % over the whole mudflat. The model suggests MPB PP is sensitive to the photoacclimation status of MPB cells, i.e. their light use efficiency at a given light level. This first modeling attempt to account for MPB photoinhibition is highly constrained by our current theoretical knowledge and limitations on the MPB growth physiology, but it suggests that this process can have a substantial impact on the MPB PP

Simulation par SENEQUE 3.4 de l’impact des 8éme et 9ème programmes de l’Agence de l’Eau Seine-Normandie

Etude réalisée dans le cadre du programme de interdisciplinaire de recherche PIREN-Seine (CNRS)info:eu-repo/semantics/publishe

Eutrophication modelling chain for improved management strategies to prevent algal blooms in the Bay of Seine

International audienceEutrophication of the Seine estuary and the Bay of Seine is a crucial environmental issue for the management of ecosystems and economic activities related to fisheries and tourism in the region. A large quantity of nutrients, especially nitrogen, is brought to the coastal zone by the Seine River, the main input into that area, but also by smaller rivers along the Normandy coast. This large delivery of nitrogen leads to an imbalance between nitrogen (N), phosphorus (P) and silica (Si), which affects the growth of planktonic organisms and can exacerbate the occurrence of harmful algal blooms (HABs). These events can be damaging for shellfish fisheries, an important economic resource for the region. The study describes a new modelling chain coupling a riverine and a marine model (the Seneque/Riverstrahler and the ECO-MARS3D, respectively), which allows us to explore the effects on the coast of 2 scenarios of watershed management. The first one, focused on an upgrade of wastewater treatment plants, decreases the P fluxes by 5 to 35 kg P km–2 yr–1 on average over the 2000 to 2006 period, depending on the watershed, and would reduce about 3-fold the concentration of dinoflagellates in the adjacent coastal zone. The second one explores a hypothetical scenario of generalisation of organic farming in all agricultural areas of the basin. Although this is not realistic, it shows the best theoretical results we can achieve. With this scenario, the N fluxes decrease by almost 50%, and the dinoflagellate blooms and thus possibly the Dinophysis spp. blooms are drastically reduced by a factor of 20 to 40. Nevertheless, diatoms, which are the main primary producers in the bay and sustain the marine food web, are not significantly affected by this drastic scenario