28 research outputs found
votca/xtp_job_control: dft-gwbse, kmc and transport workflows
New
The documentation is now avaialable online.
There are new predefined workflow
sepandhaghighi/pyrgg: Version 0.2
Version 0.2
Pyrgg is an easy-to-use synthetic random graph generator written in Python which supports various graph file formats including DIMACS .gr files.
Pyrgg has the ability to generate graphs of different sizes and is designed to provide input files for broad range of graph-based research applications, including but not limited to testing, benchmarking and performance-analysis of graph processing frameworks.
Pyrgg target audiences are computer scientists who study graph algorithms and graph processing frameworks.
Graph Specifications :
Weighted
Signed
Self Loop
Parallel Arc
Sparse
Dense
Supported Formats:
DIMACS(.gr)
CSV(.csv)
JSON(.json)
YAML(.yaml)
Weighted Edge List(.wel)
ASP(.lp)
Trivial Graph Format(.tgf)
UCINET DL Format(.dl)
Pickle(.p)
JOSS paper accepted : http://dx.doi.org/10.21105/joss.0033
taishi-i/nagisa: nagisa v0.2.11
<p><strong>nagisa 0.2.11</strong> incorporates the following changes:</p>
<ul>
<li>Fix the <a href="https://python-poetry.org/">Poetry</a> installation error that @himkt reported https://github.com/taishi-i/nagisa/issues/32</li>
</ul>
<p>This issue was caused by the lack of correct library dependencies in the tar.gz files registered on PyPI. Specifically, in versions prior to 0.2.10, the following information was not included in the <code>PKG-INFO file</code> of the tar.gz.</p>
<pre><code>Requires-Dist: six
Requires-Dist: numpy
Requires-Dist: DyNet38
</code></pre>
<blockquote>
<p><a href="https://files.pythonhosted.org/packages/a7/16/4e44953e3ed4a61e4ed14af72c9b074949811ba0bd5900db1908bc2bd7b9/nagisa-0.2.10.tar.gz">nagisa-0.2.10.tar.gz</a> does not include the <code>Requires-Dist</code> in PKG-INFO.</p>
</blockquote>
<p>The issue was caused by an outdated build environment when creating tar.gz. Therefore, by updating <code>pip, wheel, and build</code> to their latest versions and creating tar.gz, we were able to include the correct dependency information in the tar.gz, resolving this problem.</p>
<blockquote>
<p><a href="https://files.pythonhosted.org/packages/e1/71/1cc63f4fde1c1ca491ea69b46c3c5bd6bb06f3efa8262f34b227fe25dbf5/nagisa-0.2.11.tar.gz">nagisa-0.2.11.tar.gz</a> includes the <code>Requires-Dist</code> in PKG-INFO.</p>
</blockquote>
<p>In Poetry, dependency library information is fetched from https://pypi.org/pypi/nagisa/json, which refers to tar.gz. Therefore, errors occurred in versions prior to 0.2.10.</p>
<pre><code>import requests
version = "0.2.10"
url = f"https://pypi.org/pypi/nagisa/{version}/json"
response = requests.get(url)
data = response.json()
dependencies = data.get("info", {}).get("requires_dist", [])
print(f"Version {version}: {dependencies}")
# Version 0.2.10: ['six', 'numpy', 'DyNet']
</code></pre>
<p>With this update, it is now possible to obtain correct information about dependency libraries.</p>
<pre><code>import requests
version = "0.2.11"
url = f"https://pypi.org/pypi/nagisa/{version}/json"
response = requests.get(url)
data = response.json()
dependencies = data.get("info", {}).get("requires_dist", [])
print(f"Version {version}: {dependencies}")
# Version 0.2.11: ['six', 'numpy', 'DyNet38']
</code></pre>
<ul>
<li>Add Python wheels (3.6, 3.7, 3.8, 3.9, 3.10, 3.11, 3,12) to <a href="https://pypi.org/project/nagisa/0.2.11/">PyPI</a> for Linux</li>
<li>Add Python wheels (3.6, 3.7, 3.8, 3.9, 3.10, 3.11) to <a href="https://pypi.org/project/nagisa/0.2.11/">PyPI</a> for macOS Intel</li>
<li>Add Python wheels (3.6, 3.7, 3.8) to <a href="https://pypi.org/project/nagisa/0.2.11/">PyPI</a> for Windows</li>
</ul>
vantage6/vantage6: 3.8.1
The main vantage6 repository: code for the central server, nodes, CLI and Python Clien
vantage6/vantage6: 3.7.3
The main vantage6 repository: code for the central server, nodes, CLI and Python Clien
vantage6/vantage6: version/4.1.0
The main vantage6 repository: code for the central server, nodes, CLI and Python Clien
vantage6/vantage6: version/4.1.3
The main vantage6 repository: code for the central server, nodes, CLI and Python Clien
vantage6/vantage6: 3.8.2
The main vantage6 repository: code for the central server, nodes, CLI and Python Clien
vantage6/vantage6: version/4.0.0a10
The main vantage6 repository: code for the central server, nodes, CLI and Python Clien