Spatial Patterns and Short-term Changes of Coral Assemblages Along a Cross-shelf Gradient in the Southwestern Lagoon of New Caledonia

Coral reef assemblages generally form gradients of spatial structures which are governed by a variety of interacting physical and biological processes that vary in intensity, frequency, and spatial scale. Assessing the structure of contemporary reef assemblages may help to understand future changes and to identify appropriate conservation actions. The spatial distribution and interannual variability (from 2006 to 2008) of coral assemblages were investigated at 10 stations in the southwestern lagoon of New Caledonia, and the strength of the cross-shelf gradient was evaluated. Coral cover, generic richness, and abundance of adult and juvenile assemblages were highly variable within and among the three major reef habitats (fringing, mid-shelf, and barrier reefs). Abundance increased with distance from shore, whereas generic richness and cover were not correlated with shelf position. Assemblage composition was generally related to habitat, even though some mid-shelf and fringing reef assemblages resembled those observed on other habitats. A significant correlation between juvenile and adult distributions was recorded, suggesting that adult assemblages are partly controlled by the short-term history of recruitment patterns. The interannual variation of coral assemblages was far less pronounced, with significant changes only detected at some mid-shelf and barrier reefs, for a few genera characterised by high turn-over

Modelling of fluorine based high density plasma for the etching of silica glasses

International audienceAn etching simulator has been developed to study the etching of commercial silica glass (Pyrex®, D263®, AF45®, and Vycor®) in a SF6/Ar inductively coupled plasma (ICP) discharge. The etching model is based on the development of the plasma kinetic model coupled to a two dimensional (2D) Monte Carlo cellular surface model to predict the etched surface morphology as a function of the operating conditions. The SF6/Ar plasma model allows us to predict the neutral and ion species fluxes, as well as the density and the temperature of electrons, as a function of the reactor operating conditions. Such output parameters are used as input parameters in both the sheath and etching models. The 2D Monte Carlo cellular model is based on the representation of both the substrate and the mask by uniform cells, which each represents a real number of sites. The preferential redeposition mechanism of the etched products on the metallic sites seems to play an important role on the formation and the propagation of the etched surface roughness. The results obtained by the model are compared with the experimental results for etching rate and roughness. A satisfactory agreement between the experimental results and the model concerning the etching rate and the etched surface morphology has been obtained for different glasses

Small-scale habitat structure modulates the effects of no-take marine reserves for coral reef macroinvertebrates

No-take marine reserves are one of the oldest and most versatile tools used across the Pacific for the conservation of reef resources, in particular for invertebrates traditionally targeted by local fishers. Assessing their actual efficiency is still a challenge in complex ecosystems such as coral reefs, where reserve effects are likely to be obscured by high levels of environmental variability. The goal of this study was to investigate the potential interference of small-scale habitat structure on the efficiency of reserves. The spatial distribution of widely harvested macroinvertebrates was surveyed in a large set of protected vs. unprotected stations from eleven reefs located in New Caledonia. Abundance, density and individual size data were collected along random, small-scale (20×1 m) transects. Fine habitat typology was derived with a quantitative photographic method using 17 local habitat variables. Marine reserves substantially augmented the local density, size structure and biomass of the target species. Density of Trochus niloticus and Tridacna maxima doubled globally inside the reserve network; average size was greater by 10 to 20% for T. niloticus. We demonstrated that the apparent success of protection could be obscured by marked variations in population structure occurring over short distances, resulting from small-scale heterogeneity in the reef habitat. The efficiency of reserves appeared to be modulated by the availability of suitable habitats at the decimetric scale ("microhabitats") for the considered sessile/low-mobile macroinvertebrate species. Incorporating microhabitat distribution could significantly enhance the efficiency of habitat surrogacy, a valuable approach in the case of conservation targets focusing on endangered or emblematic macroinvertebrate or relatively sedentary fish species

Extremely high but localized pulses of coral recruitment in the southwestern lagoon of New Caledonia and implications for conservation

International audienceRecruitment processes largely drive spatial distributions, dynamics, and recovery potential of marine communities. Determining scales of variation in recruitment rates and composition can help in understanding population replenishment mechanisms, while identifying recruitment hotspots is crucial for improving conservation strategies, particularly for threatened marine ecosystems such as coral reefs. We examined the spatial and interannual variability (2012-2014) of coral recruitment at multiple scales within and among reef habitats (14 stations) in the southwestern lagoon of New Caledonia. Recruit assemblages were characterized by high recruitment rates compared to other regions (overall mean of 34.9 recruits per 11 × 11 × 1 cm settlement tile, corresponding to 1220.9 recruits m -2 ) and strong dominance of Acroporidae. We found a marked spatial heterogeneity among habitats but also exceptionally high interannual variation (100-fold), with extreme recruitment peaks (up to 13572.8 recruits m -2 , with a maximum of 811 recruits on a single tile) recorded in 2014 at some fringing and mid-shelf reefs, the highest records ever reported to date. These encouraging results contrast with other reefs where recent declines in coral recruitment rates have been documented with major concerns for their resilience capacities. However, the marked spatio-temporal variability of coral recruitment complicates conservation strategies, as it makes it difficult to identify ‘recruitment hotspots’ as priority sites to protect for their potential capacity to boost the replenishment of local populations

A "quick and clean" photographic method for the description of coral reef habitats

The use of scuba-based photo/video methods for characterizing coral reef habitats has gained increased popularity within the last decade, but few work examined the potentiality of surface photography to provide accurate, reliable habitat profiles in contrasted habitats. Photo transects were thus conducted by snorkeling in contrasted reef biotopes (reef flat, reef crest, sandy bottom) from the south-west lagoon of New Caledonia, to develop and test a "quick and clean" approach suitable for addressing monitoring as well as research-oriented programs. Pictures were taken by a snorkeler from the surface over twelve (20 x 1 m) reef crest/reef flat/soft bottoms transects using a standard 8 Mpixel digital-camera with underwater housing. Habitats were characterized from percent covers for 15 categories of local habitat variables related to sediment type and substrate coverage. Exhaustive area analyses using computer-assisted manual digitalizing were used to provide reliable habitat profiles from the digital pictures. Results were subsequently compared with surface estimates derived from random stratified point count techniques, for numbers of points comprised between I and 99 per m(2). Sampling-based randomization techniques allowed us to provide robust, reliable statistical estimates of accuracy and precision over 1000 randomized bootstrap replicates per transect. Results emphasized high accuracy and precision at transect scale whatever the reef biotopes considered, with maximum deviations from reference values of similar to 1 percent cover in almost all cases and associated variances From a practical point of view, using a 9 points/m(2) ratio clearly provided reliable, quantitative descriptions of our reef transects (maximal errors <1.5 percent cover with 95% confidence level). Cost-effectiveness is high, with 15-30 minutes/transect from field data collection (< 10 min) to computation of final percent covers (10-20 min). The method outlined in this paper thus combines high statistical efficiency and logistical ease, and could be used to address more functional perspectives

Analyse du déterminisme de la coloration et de l'ornementation chez la palourde japonaise

La palourde japonaise présente un grand polymorphisme de coloration de la coquille. Bien que ce polymorphisme soit connu depuis longtemps, son hérédité n'a jamais été analysée. Cette étude a pour but, hormis la connaissance fondamentale du déterminisme génétique des caractères de la coloration, de permettre de produire des individus homozygotes pour la coloration. Ceux-ci pourront être utilisés comme marqueurs génétiques dans des expériences au laboratoire. La coloration est définie par trois caractères, l'asymétrie, l'ornementation et la couleur de fond. Les palourdes à coloration asymétrique sont totalement ou partiellement dépigmentées, à l'exception d'une bande postérieure sur la valve gauche. Les palourdes à coloration symétrique sont pigmentées sur les deux valves. Quatre séries de croisements ont permis l'analyse de différents caractères, Asymétrie et Symétrie, et des ornementations Vague [V] et Zébré [Z]. Les résultats suggèrent que la coloration est contrôlée par au moins deux gènes. Le caractère d'asymétrie est contrôlé par un gène à deux allèles, asymétrie (A) dominante et symétrie (S) récessive. Quelques individus asymétriques homozygotes ont été identifiés. Un phénotype Bigarré (Bi), est apparu dans les ségrégations du croisement V × V et des croisements Z × Z. Les résultats suggèrent que Vague et Zébré sont dominants sur Bigarré. Cependant, il existe d'autres ornementations (phénotype 1) et le gène codant pour l'ornementation serait ainsi multiallélique. Le déterminisme de la couleur n'est pas défini. Par contre, les observations montrent que la coloration n'est pas liée au sexe. Dans la majorité des croisements, les proportions observées pour l'asymétrie s'éloignent des rapports attendus selon les lois de Mendel. Cette différence est due à un déficit systématique en individus homozygotes symétriques qui n'a pu être expliqué

Etching studies of silica glasses in SF6/Ar inductively coupled plasmas: Implications for microfluidic devices fabrication

International audienceTo fabricate microlaboratories, commercially available silica glasses represent a good alternative to the expensive quartz or fused silica substrates. Therefore, the authors have here investigated the behavior of four of them-Vycor, Pyrex, D263, and AF45-in SF6 and SF6/Ar inductively coupled plasmas. Using Vycor, a material close to pure SiO2, as a reference, they demonstrated that the etch rate negatively correlates with the global content in metallic oxides. However, no such clear trend was found for the surface roughness and they hypothesize that the large asperities (>500 nm) sometimes observed might be due to local variation in the glass surface composition. Furthermore, investigations on the influence of the plasma conditions (i.e.,source power, dc self-bias, gas mixture, and pressure) on the etch rate, surface chemistry, and surface morphology, as well as positive ion current and fluorine concentration measurements, enable them to unravel an ion enhanced chemical etching mechanism, where stronger ion assistance is needed when more metallic oxides are present. By increasing the ion to neutral flux ratio, they consequently could, for all the materials, reduce the surface roughness to less than 5 nm while maintaining etch rates around 150 nm/min. These conditions have further been used to optimize pattern transfer experiments