Rayleigh-Benard Convection in Large-Aspect-Ratio Domains

The coarsening and wavenumber selection of striped states growing from random initial conditions are studied in a non-relaxational, spatially extended, and far-from-equilibrium system by performing large-scale numerical simulations of Rayleigh-B\'{e}nard convection in a large-aspect-ratio cylindrical domain with experimentally realistic boundaries. We find evidence that various measures of the coarsening dynamics scale in time with different power-law exponents, indicating that multiple length scales are required in describing the time dependent pattern evolution. The translational correlation length scales with time as $t^{0.12}$, the orientational correlation length scales as $t^{0.54}$, and the density of defects scale as $t^{-0.45}$. The final pattern evolves toward the wavenumber where isolated dislocations become motionless, suggesting a possible wavenumber selection mechanism for large-aspect-ratio convection.Comment: 5 pages, 6 figure

Enhanced tracer transport by the spiral defect chaos state of a convecting fluid

To understand how spatiotemporal chaos may modify material transport, we use direct numerical simulations of the three-dimensional Boussinesq equations and of an advection-diffusion equation to study the transport of a passive tracer by the spiral defect chaos state of a convecting fluid. The simulations show that the transport is diffusive and is enhanced by the spatiotemporal chaos. The enhancement in tracer diffusivity follows two regimes. For large Peclet numbers (that is, small molecular diffusivities of the tracer), we find that the enhancement is proportional to the Peclet number. For small Peclet numbers, the enhancement is proportional to the square root of the Peclet number. We explain the presence of these two regimes in terms of how the local transport depends on the local wave numbers of the convection rolls. For large Peclet numbers, we further find that defects cause the tracer diffusivity to be enhanced locally in the direction orthogonal to the local wave vector but suppressed in the direction of the local wave vector.Comment: 11 pages, 12 figure

Coalescence of Oil Droplets using Sponge-like Structure of Polyvinylidene Fluoride Membranes

This work reports the effect of the membrane pore size distribution on the oil droplets size distribution in permeate using the polyvinylidene fluoride (PVDF) membranes. The spongelike structures of the PVDF membranes were fabricated via the phase inversion technique using 30% v/v ethanol aqueous solution as coagulation medium. Water and polyethylene glycol (PEG1000) were used as the pore forming additives in the dope solutions. Microfiltration was employed to coalesce the oil droplets at the transmembrane pressure of 2.5 bar. Simulated alkaline-surfactant-polymer (ASP) produced water was tested as the feed solution. Results revealed that the PVDF membranes with sponge-like structure were formed. The additives in the dope solutions have induced the membranes to become thicker due to more porous, spongy and resilient structure. The membrane pore sizes increased with the presence of the additives in the dope solutions especially when larger molecular weight of the additive, i.e., PEG1000 was used. The mode of the oil droplets radius increased from 61.2 nm in the feed solution to 95.1, 356.2 and 1335 nm in the permeates by the corresponding membranes without additive, with water and PEG1000 as the additives. The membranes with larger pore sizes as well as more open structure were able to trap and coalesce more oil droplets which produced larger size of the oil droplets in the permeates

Pattern Formation and Dynamics in Rayleigh-B\'{e}nard Convection: Numerical Simulations of Experimentally Realistic Geometries

Rayleigh-B\'{e}nard convection is studied and quantitative comparisons are made, where possible, between theory and experiment by performing numerical simulations of the Boussinesq equations for a variety of experimentally realistic situations. Rectangular and cylindrical geometries of varying aspect ratios for experimental boundary conditions, including fins and spatial ramps in plate separation, are examined with particular attention paid to the role of the mean flow. A small cylindrical convection layer bounded laterally either by a rigid wall, fin, or a ramp is investigated and our results suggest that the mean flow plays an important role in the observed wavenumber. Analytical results are developed quantifying the mean flow sources, generated by amplitude gradients, and its effect on the pattern wavenumber for a large-aspect-ratio cylinder with a ramped boundary. Numerical results are found to agree well with these analytical predictions. We gain further insight into the role of mean flow in pattern dynamics by employing a novel method of quenching the mean flow numerically. Simulations of a spiral defect chaos state where the mean flow is suddenly quenched is found to remove the time dependence, increase the wavenumber and make the pattern more angular in nature.Comment: 9 pages, 10 figure

Efficient Algorithm on a Non-staggered Mesh for Simulating Rayleigh-Benard Convection in a Box

An efficient semi-implicit second-order-accurate finite-difference method is described for studying incompressible Rayleigh-Benard convection in a box, with sidewalls that are periodic, thermally insulated, or thermally conducting. Operator-splitting and a projection method reduce the algorithm at each time step to the solution of four Helmholtz equations and one Poisson equation, and these are are solved by fast direct methods. The method is numerically stable even though all field values are placed on a single non-staggered mesh commensurate with the boundaries. The efficiency and accuracy of the method are characterized for several representative convection problems.Comment: REVTeX, 30 pages, 5 figure

Antiviral activity of silymarin against chikungunya virus

Citation: Lani, R., Hassandarvish, P., Chiam, C. W., Moghaddam, E., Chu, J. J. H., Rausalu, K., . . . Zandi, K. (2015). Antiviral activity of silymarin against chikungunya virus. Scientific Reports, 5, 10. doi:10.1038/srep11421The mosquito-borne chikungunya virus (CHIKV) causes chikungunya fever, with clinical presentations such as severe back and small joint pain, and debilitating arthritis associated with crippling pains that persist for weeks and even years. Although there are several studies to evaluate the efficacy of drugs against CHIKV, the treatment for chikungunya fever is mainly symptom-based and no effective licensed vaccine or antiviral are available. Here, we investigated the antiviral activity of three types of flavonoids against CHIKV in vitro replication. Three compounds: silymarin, quercetin and kaempferol were evaluated for their in vitro antiviral activities against CHIKV using a CHIKV replicon cell line and clinical isolate of CHIKV of Central/East African genotype. A cytopathic effect inhibition assay was used to determine their activities on CHIKV viral replication and quantitative reverse transcription PCR was used to calculate virus yield. Antiviral activity of effective compound was further investigated by evaluation of CHIKV protein expression using western blotting for CHIKV nsP1, nsP3, and E2E1 proteins. Briefly, silymarin exhibited significant antiviral activity against CHIKV, reducing both CHIKV replication efficiency and down-regulating production of viral proteins involved in replication. This study may have important consequence for broaden the chance of getting the effective antiviral for CHIKV infection

An approximate solution of the MHD Falkner-Skan flow by Hermite functions pseudospectral method

Based on a new approximation method, namely pseudospectral method, a solution for the three order nonlinear ordinary differential laminar boundary layer Falkner-Skan equation has been obtained on the semi-infinite domain. The proposed approach is equipped by the orthogonal Hermite functions that have perfect properties to achieve this goal. This method solves the problem on the semi-infinite domain without truncating it to a finite domain and transforming domain of the problem to a finite domain. In addition, this method reduces solution of the problem to solution of a system of algebraic equations. We also present the comparison of this work with numerical results and show that the present method is applicable.Comment: 15 pages, 4 figures; Published online in the journal of "Communications in Nonlinear Science and Numerical Simulation

Gigantic amoebic liver abscess in pregnancy : A case report

Amoebic liver abscess in pregnancy is genuinely rare in its presentation. Yet, the main issue surrounding this agenda is the diagnostic challenge that it poses especially when symptomatology is vague and clues are subtle which altogether evades the diagnosis proper. We would like to dwell mainly on these issues in hopes of enlightening clinicians towards these diagnostic dilemmas. We report an extremely rare case of amoebic liver abscess occurring in the third trimester of pregnancy in a 29-year-old lady living in an interior village in Sabah. It was a combination of biochemical, radiographic and molecular investigations that ultimately led to the final diagnosis. In lieu of the high risk of mortality amongst pregnant mothers afflicted with amoebic liver abscess, the inherent need for early diagnosis requiring a high index of suspicion is vital. Elevated alkaline phosphatase alongside neutrophilia appears to be the most consistent liver parameters in guiding clinicians towards the presence of liver abscess