89 research outputs found
Energy-Efficient Cell-Free Massive MIMO Through Sparse Large-Scale Fading Processing
Cell-free massive multiple-input multiple-output (CF mMIMO) systems serve the
user equipments (UEs) by geographically distributed access points (APs) by
means of joint transmission and reception. To limit the power consumption due
to fronthaul signaling and processing, each UE should only be served by a
subset of the APs, but it is hard to identify that subset. Previous works have
tackled this combinatorial problem heuristically. In this paper, we propose a
sparse distributed processing design for CF mMIMO, where the AP-UE association
and long-term signal processing coefficients are jointly optimized. We
formulate two sparsity-inducing mean-squared error (MSE) minimization problems
and solve them by using efficient proximal approaches with block-coordinate
descent. For the downlink, more specifically, we develop a virtually optimized
large-scale fading precoding (V-LSFP) scheme using uplink-downlink duality. The
numerical results show that the proposed sparse processing schemes work well in
both uplink and downlink. In particular, they achieve almost the same spectral
efficiency as if all APs would serve all UEs, while the energy efficiency is
2-4 times higher thanks to the reduced processing and signaling.Comment: 37 pages, 9 figures, accepted for publication in the IEEE
Transactions on Wireless Communication
A serious canker disease caused by Immersiporthe knoxdaviesiana gen. et sp. nov. (Cryphonectriaceae) on native Rapanea melanophloeos in South Africa
Recent disease surveys in the Western Cape province of South Africa have revealed a previously unknown and serious stem canker disease on native Rapanea melanophloeos (Myrsinaceae, Ericales) trees. Cankers commonly result in the death of branches or entire stems. Fruiting structures typical of fungi in the Cryphonectriaceae were observed on the surfaces of cankers. In this study, the fungus was identified and its pathogenicity to R. melanophloeos was tested. Multigene phylogenetic analyses based on DNA sequences of the partial LSU gene, ITS region of the nuclear ribosomal DNA gene and two regions of the β-tubulin (BT) gene, showed that the fungus represents a formerly undescribed genus and species in the Cryphonectriaceae. The fungus was also morphologically distinct from other genera in this family. Inoculation trials showed that the fungus described here as Immersiporthe knoxdaviesiana gen. et sp. nov. is an aggressive pathogen of R. melanophloeos trees.DST/NRF Centre of Excellence in Tree Health Biotechnology (CHTB)http://www.wiley.com/bw/journal.asp?ref=0032-0862hb201
Quambalaria species associated with eucalypt diseases in southern China
The genus Quambalaria includes several
important pathogens of species of Eucalyptus and
Corymbia, mainly causing leaf and shoot blight. Recently,
extensive shoot and leaf dieback and stem cankers
suspected to be Quambalaria diseases have been found
on young Eucalyptus urophylla E. grandis trees in
Guangdong and Hainan Provinces. The occurrence of
Quambalaria species and their association with eucalypt
hosts within China needs to be investigated for tree
diseases management. The isolates from the diseased
samples were identified based on their morphological
structures and phylogenetic analyses with DNA sequence
data for the internal transcribed spacer region and large
ribosome subunit RNA of the nuclear rDNA. This
work revealed that three species of Quambalaria were
present: Quambalaria pitereka from Corymbia citriodora,
Q. eucalypti from E. urophylla E. grandis, both isolated
from young eucalypt leaves and shoots in Guangdong
Province, and Quambalaria simpsonii, which was isolated
from stem cankers of E. urophylla E. grandis at four
different sites across Guangdong and Hainan Provinces.
These results confirmed that Quambalaria agents were
associated with the diseases occurring on eucalypt hosts in
South China. This is the first report of Q. eucalypti in Asia
and the first report of Q. simpsonii in China on Eucalyptus
trees.The Fundamental Research Funds for the Central Non-profit Research Institution of CAF (CAFYBB2014MA018), and the Overseas Outstanding Scholars Lecture Program, the Fundamental Research Funds for the Central Non-profit Research Institution of CAF (CAFYBB2017ZF005).http://journal.hep.com.cn/faseam2018Forestry and Agricultural Biotechnology Institute (FABI
Calonectria in the age of genes and genomes : towards understanding an important but relatively unknown group of pathogens
The genus Calonectria includes many aggressive plant pathogens causing diseases on various agricultural crops as well as forestry and ornamental tree species. Some species have been accidentally introduced into new environments via international trade of putatively asymptomatic plant germplasm or contaminated soil, resulting in significant economic losses. This review provides an overview of the taxonomy, population biology, and pathology of Calonectria species, specifically emerging from contemporary studies that have relied on DNA-based technologies. The growing importance of genomics in future research is highlighted. A life cycle is proposed for Calonectria species, aimed at improving our ability to manage diseases caused by these pathogens.The National Key R&D Program of China (China-South Africa Forestry Joint Research Centre Project);
the National Ten-thousand Talents Program;
the GuangDong Top Young Talents Program.http://wileyonlinelibrary.com/journal/mpphj2023BiochemistryForestry and Agricultural Biotechnology Institute (FABI)GeneticsMicrobiology and Plant Patholog
The Eucalyptus stem canker pathogen Teratosphaeria gauchensis represents distinct genetic groups in Africa and South America
Teratosphaeria gauchensis (Capnodiales) causes a serious stem canker disease on commercially propagated Eucalyptus species in South
America. Recently, this pathogen was detected for the first time in Africa. Very little is known regarding the biology or origin of T. gauchensis,
but it has been suggested that it is native to South America. The aim of this study was to compare isolates from Africa and South America
using microsatellite markers. Bayesian analysis conducted in STRUCTURE, principal coordinates analysis and a UPGMA dendrogram
revealed two distinct genetic groups for these isolates. The South American isolates were more genetically diverse than those from Africa.
Patterns of genetic diversity in Africa suggest that T. gauchensis could have been introduced into Zimbabwe before spreading north-eastwards.
The existence of the two genetic groups and high haplotype richness associated with the South American and Zimbabwean populations
suggest that it will be more difficult to reduce the impact of disease caused by T. gauchensis in these regions than in those areas
where there is limited genetic diversity.The National Research Foundation of South Africa (Grant specific unique reference number (UID83924), the members of the Tree Protection Co-operative Program (TPCP), the THRIP initiative of the Department of Trade and Industry and the DST/
NRF Centre of Excellence in Tree Health Biotechnology (CTHB).http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1439-03292017-06-30hb2016Microbiology and Plant Patholog
Three genetic groups of the Eucalyptus stem canker pathogen Teratosphaeria zuluensis introduced into Africa from an unknown source
The Eucalyptus stem canker pathogen Teratosphaeria zuluensis was discovered in South
Africa in 1988 and it has subsequently been found in several other African countries as well
as globally. In this study, the population structure, genetic diversity and evolutionary history
of T. zuluensis were analysed using microsatellite markers to gain an enhanced understanding
of its movement in Africa. Isolates were collected from several sites in Malawi, Mozambique,
Uganda and Zambia. Data obtained were compared with those previously published for a
South African population. The data obtained from 334 isolates, amplified across eight
microsatellite loci, were used for assignment, differentiation and genetic diversity tests.
STRUCTURE analyses, θst and genetic distances revealed the existence of two clusters, one
dominated by isolates from South Africa and the other by isolates from the Zambezi basin
including Malawi, Mozambique and Zambia. High levels of admixture were found within and
among populations, dominated by the Mulanje population in Malawi. Moderate to low
genetic diversity of the populations supports the previously held view that the pathogen was
introduced into Africa. The clonal nature of the Ugandan population suggests a very recent
introduction, most likely from southern Africa.National Research Foundation of South Africa (Grant specific unique reference number (UID83924).http://link.springer.com/journal/104822017-01-31hb2016Forestry and Agricultural Biotechnology Institute (FABI)Microbiology and Plant PathologyPlant Production and Soil Scienc
Novel species of Celoporthe from Eucalyptus and Syzygium trees in China and Indonesia
Many species in the Cryphonectriaceae
cause diseases of trees, including those in the genera
Eucalyptus and Syzygium. During disease surveys on
these trees in southern China, fruiting structures
typical of fungi in the Cryphonectriaceae and
associated with dying branches and stems were
observed. Morphological comparisons suggested that
these fungi were distinct from the well known
Chrysoporthe deuterocubensis, also found on these trees
in China. The aim of this study was to identify these
fungi and evaluate their pathogenicity to Eucalyptus
clones/species as well as Syzygium cumini. Three
morphologically similar fungal isolates collected
previously from Indonesia also were included in the
study. Isolates were characterized based on comparisons
of morphology and DNA sequence data for the
partial LSU and ITS nuclear ribosomal DNA, btubulin
and TEF-1a gene regions. After glasshouse trials to select virulent isolates field inoculations were
undertaken to screen different commercial Eucalyptus
clones/species and S. cumini trees for susceptibility
to infection. Phylogenetic analyses showed that the
Chinese isolates and those from Indonesia reside in a
clade close to previously identified South African
Celoporthe isolates. Based on morphology and DNA
sequence comparisons, four new Celoporthe spp. were
identified and they are described as C. syzygii, C.
eucalypti, C. guangdongensis and C. indonesiensis.
Field inoculations indicated that the three Chinese
Celoporthe spp., C. syzygii, C. eucalypti and C.
guangdongensis, are pathogenic to all tested Eucalyptus
and S. cumini trees. Significant differences in the
susceptibility of the inoculated Eucalyptus clones/
species suggest that it will be possible to select diseasetolerant
planting stock for forestry operations in the
future.Projects 2007DFA31190, 2008B050100014 and
10145624536-400000, and Tree Protection
Co-operative Programme (TPCP).http://www.mycologia.org/nf201
Endophytic Cryphonectriaceae on native Myrtales : possible origin of Chrysoporthe canker on plantation-grown Eucalyptus
Chrysoporthe austroafricana (Cryphonectriaceae) is a damaging canker pathogen on
Eucalyptus species in Southern Africa. Recent studies have shown that the fungus
occurs on native Syzygium species and that it has apparently undergone a host range
expansion from these native trees to infect non-native Eucalyptus. The aim of this
study was to consider whether C. austroafricana and other Cryphonectriaceae might
exist as endophytes in native Myrtaceae, providing a source of inoculum to infect
non-native Myrtales. Healthy branches were collected from Myrtaceae in Mozambique, incubated in florist foam, allowed to dry gradually and monitored for
the appearance of fruiting bodies resembling species in the Cryphonectriaceae.
Isolates were identified based on DNA sequence data. Two species in the
Cryphonectriaceae were obtained, representing the first evidence that species in the
Cryphonectriaceae occur as endophytes on native Myrtales, thus providing a source of
inoculum to infect non-native and susceptible trees. This has important implications
regarding the movement of planting stock used by ornamental tree and forestry
enterprises.The National Research Foundation of South Africa (Grant specific unique reference number UID83924), the Tree Protection Co-operative Programme (TPCP), the THRIP initiative of the Department of Trade and Industry, the DST/NRF Centre of Excellence in Tree Health Biotechnology (CTHB) of the Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, South Africa.http://www.elsevier.com/locate/funbio2017-06-30hb2016Microbiology and Plant Patholog
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