COSORE: A community database for continuous soil respiration and other soil-atmosphere greenhouse gas flux data

Globally, soils store two to three times as much carbon as currently resides in the atmosphere, and it is critical to understand how soil greenhouse gas (GHG) emissions and uptake will respond to ongoing climate change. In particular, the soil-to-atmosphere CO2 flux, commonly though imprecisely termed soil respiration (RS), is one of the largest carbon fluxes in the Earth system. An increasing number of high-frequency RS measurements (typically, from an automated system with hourly sampling) have been made over the last two decades; an increasing number of methane measurements are being made with such systems as well. Such high frequency data are an invaluable resource for understanding GHG fluxes, but lack a central database or repository. Here we describe the lightweight, open-source COSORE (COntinuous SOil REspiration) database and software, that focuses on automated, continuous and long-term GHG flux datasets, and is intended to serve as a community resource for earth sciences, climate change syntheses and model evaluation. Contributed datasets are mapped to a single, consistent standard, with metadata on contributors, geographic location, measurement conditions and ancillary data. The design emphasizes the importance of reproducibility, scientific transparency and open access to data. While being oriented towards continuously measured RS, the database design accommodates other soil-atmosphere measurements (e.g. ecosystem respiration, chamber-measured net ecosystem exchange, methane fluxes) as well as experimental treatments (heterotrophic only, etc.). We give brief examples of the types of analyses possible using this new community resource and describe its accompanying R software package.This article is published as Bond‐Lamberty, Ben, Danielle S. Christianson, Avni Malhotra, Stephanie C. Pennington, Debjani Sihi, Amir AghaKouchak, Hassan Anjileli et al. "COSORE: A community database for continuous soil respiration and other soil‐atmosphere greenhouse gas flux data." Global change biology 26, no. 12 (2020): 7268-7283. doi:10.1111/gcb.15353. Works produced by employees of the U.S. Government as part of their official duties are not copyrighted within the U.S. The content of this document is not copyrighted

Changing forest water yields in response to climate warming: results from long-term experimental watershed sites across North America

Climate warming is projected to affect forest water yields but the effects are expected to vary. We investigated how forest type and age affect water yield resilience to climate warming. To answer this question, we examined the variability in historical water yields at long-term experimental catchments across Canada and the United States over 5-year cool and warm periods. Using the theoretical framework of the Budyko curve, we calculated the effects of climate warming on the annual partitioning of precipitation (P) into evapotranspiration (ET) and water yield. Deviation (d) was defined as a catchment’s change in actual ET divided by P [AET/P; evaporative index (EI)] coincident with a shift from a cool to a warm period – a positive d indicates an upward shift in EI and smaller than expected water yields, and a negative d indicates a downward shift in EI and larger than expected water yields. Elasticity was defined as the ratio of inter annual variation in potential ET divided by P (PET/P; dryness index) to inter annual variation in the EI – high elasticity indicates low d despite large range in drying index (i.e., resilient water yields), low elasticity indicates high d despite small range in drying index (i.e., non-resilient water yields). Although the data needed to fully evaluate ecosystems based on these metrics are limited, we were able to identify some characteristics of response among forest types. Alpine sites showed the greatest sensitivity to climate warming with any warming leading to increased water yields. Conifer forests included catchments with lowest elasticity and stable to larger water yields. Deciduous forests included catchments with intermediate elasticity and stable to smaller water yields. Mixed coniferous/deciduous forests included catchments with highest elasticity and stable water yields. Forest type appeared to influence the resilience of catchment water yields to climate warming, with conifer and deciduous catchments more susceptible to climate warming than the more diverse mixed forest catchments

Changing forest water yields in response to climate warming: results from long-term experimental watershed sites across North America

Climate warming is projected to affect forest water yields but the effects are expected to vary. We investigated how forest type and age affect water yield resilience to climate warming. To answer this question, we examined the variability in historical water yields at long‐term experimental catchments across Canada and the United States over 5‐year cool and warm periods. Using the theoretical framework of the Budyko curve, we calculated the effects of climate warming on the annual partitioning of precipitation (P) into evapotranspiration (ET) and water yield. Deviation (d) was defined as a catchment's change in actual ET divided by P [AET/P; evaporative index (EI)] coincident with a shift from a cool to a warm period – a positive d indicates an upward shift in EI and smaller than expected water yields, and a negative d indicates a downward shift in EI and larger than expected water yields. Elasticity was defined as the ratio of interannual variation in potential ET divided by P (PET/P; dryness index) to interannual variation in the EI – high elasticity indicates low d despite large range in drying index (i.e., resilient water yields), low elasticity indicates high d despite small range in drying index (i.e., nonresilient water yields). Although the data needed to fully evaluate ecosystems based on these metrics are limited, we were able to identify some characteristics of response among forest types. Alpine sites showed the greatest sensitivity to climate warming with any warming leading to increased water yields. Conifer forests included catchments with lowest elasticity and stable to larger water yields. Deciduous forests included catchments with intermediate elasticity and stable to smaller water yields. Mixed coniferous/deciduous forests included catchments with highest elasticity and stable water yields. Forest type appeared to influence the resilience of catchment water yields to climate warming, with conifer and deciduous catchments more susceptible to climate warming than the more diverse mixed forest catchments

COSORE: A community database for continuous soil respiration and other soil‐atmosphere greenhouse gas flux data

Globally, soils store two to three times as much carbon as currently resides in the atmosphere, and it is critical to understand how soil greenhouse gas (GHG) emissions and uptake will respond to ongoing climate change. In particular, the soil‐to‐atmosphere CO2 flux, commonly though imprecisely termed soil respiration (RS), is one of the largest carbon fluxes in the Earth system. An increasing number of high‐frequency RS measurements (typically, from an automated system with hourly sampling) have been made over the last two decades; an increasing number of methane measurements are being made with such systems as well. Such high frequency data are an invaluable resource for understanding GHG fluxes, but lack a central database or repository. Here we describe the lightweight, open‐source COSORE (COntinuous SOil REspiration) database and software, that focuses on automated, continuous and long‐term GHG flux datasets, and is intended to serve as a community resource for earth sciences, climate change syntheses and model evaluation. Contributed datasets are mapped to a single, consistent standard, with metadata on contributors, geographic location, measurement conditions and ancillary data. The design emphasizes the importance of reproducibility, scientific transparency and open access to data. While being oriented towards continuously measured RS, the database design accommodates other soil‐atmosphere measurements (e.g. ecosystem respiration, chamber‐measured net ecosystem exchange, methane fluxes) as well as experimental treatments (heterotrophic only, etc.). We give brief examples of the types of analyses possible using this new community resource and describe its accompanying R software package

Drought limitations to leaf-level gas exchange: results from a model linking stomatal optimization and cohesion-tension theory

ABSTRACT We merge concepts from stomatal optimization theory and cohesion-tension theory to examine the dynamics of three mechanisms that are potentially limiting to leaf-level gas exchange in trees during drought: (1) a 'demand limitation' driven by an assumption of optimal stomatal functioning; (2) 'hydraulic limitation' of water movement from the roots to the leaves; and (3) 'non-stomatal' limitations imposed by declining leaf water status within the leaf. Model results suggest that species-specific 'economics' of stomatal behaviour may play an important role in differentiating species along the continuum of isohydric to anisohydric behaviour; specifically, we show that non-stomatal and demand limitations may reduce stomatal conductance and increase leaf water potential, promoting wide safety margins characteristic of isohydric species. We used model results to develop a diagnostic framework to identify the most likely limiting mechanism to stomatal functioning during drought and showed that many of those features were commonly observed in field observations of tree water use dynamics. Direct comparisons of modelled and measured stomatal conductance further indicated that non-stomatal and demand limitations reproduced observed patterns of tree water use well for an isohydric species but that a hydraulic limitation likely applies in the case of an anisohydric species

Drought limitations to leaf-level gas exchange: results from a model linking stomatal optimization and cohesion-tension theory

ABSTRACT We merge concepts from stomatal optimization theory and cohesion-tension theory to examine the dynamics of three mechanisms that are potentially limiting to leaf-level gas exchange in trees during drought: (1) a 'demand limitation' driven by an assumption of optimal stomatal functioning; (2) 'hydraulic limitation' of water movement from the roots to the leaves; and (3) 'non-stomatal' limitations imposed by declining leaf water status within the leaf. Model results suggest that species-specific 'economics' of stomatal behaviour may play an important role in differentiating species along the continuum of isohydric to anisohydric behaviour; specifically, we show that non-stomatal and demand limitations may reduce stomatal conductance and increase leaf water potential, promoting wide safety margins characteristic of isohydric species. We used model results to develop a diagnostic framework to identify the most likely limiting mechanism to stomatal functioning during drought and showed that many of those features were commonly observed in field observations of tree water use dynamics. Direct comparisons of modelled and measured stomatal conductance further indicated that non-stomatal and demand limitations reproduced observed patterns of tree water use well for an isohydric species but that a hydraulic limitation likely applies in the case of an anisohydric species

Ecosystem processes at the watershed scale: Influence of flowpath patterns of canopy ecophysiology on emergent catchment water and carbon cycling

Forest canopy water use and carbon cycling traits (WCT) can vary substantially and in spatially organized patterns, with significant impacts on watershed eco-hydrology. In many watersheds WCT may vary systematically along and between hydrologic flowpaths as an adaptation to available soil water, nutrients and microclimate-mediated atmospheric water demand. We hypothesize that the emerging patterns of WCT at the hillslope to catchment scale provide a more resistant ecohydrological system, particularly with respect to drought stress, and the maintenance of high levels of productivity. Rather than attempting to address this hypothesis with species specific patterns, we outline broader functional WCT groups, and explore the sensitivity of water and carbon balances to the representation of canopyWCT functional organization through a modeling approach. We use a well-studied experimental watershed in North Carolina where detailed mapping of forest community patterns are sufficient to describe WCT functional organization. Ecohydrological models typically use broad-scale characterizations of forest canopy composition based on remotely sensed information (e.g., evergreen vs. deciduous), which may not adequately represent the range or spatial pattern of functional group WCT at hillslope to watershed scales. We use three different representations of WCT functional organizations: 1. restricting WCT to deciduous/conifer differentiation, 2. utilizing more detailed, but aspatial, information on local forest community composition, and 3. spatially distributed representation of local forest WCT. Accounting for WCT functional organization information improves model performance not only in terms of capturing observed flow regimes (especially watershed-scale seasonal flow dynamics), but also in terms of representing more detailed canopy eco-hydrologic behavior (e.g. root zone soil moisture, evapotranspiration, and net canopy photosynthesis), especially under dry condition. Results suggest the well-known zonation of forest communities over hydrologic gradients is not just a local adaptation, but also provides a property that regulates hillslope to catchment scale behavior of water use, and drought resistance

Climate Change May Increase the Drought Stress of Mesophytic Trees Downslope With Ongoing Forest Mesophication Under a History of Fire Suppression

In mountainous headwater catchments, downslope flow of subsurface water could buffer downslope forest communities from soil moisture stress during drought. Here we investigated changes in landscape-scale vegetation patterns at five forested headwater catchments in the Coweeta Hydrologic Laboratory in the southern Appalachians. We used a ca. 30-year Landsat Thematic Mapper (TM) image record of normalized difference vegetation index (NDVI), spanning a period of recorded warming since the mid-1970. We then, related spatial and temporal canopy patterns to seasonal water balance, streamflow recession behavior, and low flow dynamics from the long-term hydrologic records. All hydrologic metrics indicated increasing evapotranspiration, decreasing streamflow given precipitation, and potentially decreasing downslope subsidy at the watershed scale over time, especially during low-flow periods. Contrary to expectations, leaf area index (LAI) and basal area increased more upslope compared to downslope over time, coincident with warming. Trends in the ratio of NDVI in upslope and downslope topographic positions were also supported by long-term tree basal area increment, litterfall, and sap flux data in one of the reference watersheds. Mesophytic trees downslope appeared to respond more to frequent droughts and experience lower growth than xerophytic trees upslope, closely mediated by the isohydric/anisohydric continuum along hydrologic flow paths. Considering ongoing forest “mesophication” under a history of fire suppression across the eastern United States deciduous forests, this study suggests that mesophytic trees downslope may be more vulnerable than xerophytic trees upslope under ongoing climate change due to an apparent dependence on upslope water subsidy

Eastern US deciduous tree species respond dissimilarly to declining soil moisture but similarly to rising evaporative demand.

Hydraulic stress in plants occurs under conditions of low water availability (soil moisture; θ) and/or high atmospheric demand for water (vapor pressure deficit; D). Different species are adapted to respond to hydraulic stress by functioning along a continuum where, on one hand, they close stomata to maintain a constant leaf water potential (ΨL) (isohydric species), and on the other hand, they allow ΨL to decline (anisohydric species). Differences in water-use along this continuum are most notable during hydrologic stress, often characterized by low θ and high D; however, θ and D are often, but not necessarily, coupled at time scales of weeks or longer, and uncertainty remains about the sensitivity of different water-use strategies to these variables. We quantified the effects of both θ and D on canopy conductance (Gc) among widely distributed canopy-dominant species along the isohydric-anisohydric spectrum growing along a hydroclimatological gradient. Tree-level Gc was estimated using hourly sap flow observations from three sites in the eastern United States: a mesic forest in western North Carolina and two xeric forests in southern Indiana and Missouri. Each site experienced at least 1 year of substantial drought conditions. Our results suggest that sensitivity of Gc to θ varies across sites and species, with Gc sensitivity being greater in dry than in wet sites, and greater for isohydric compared with anisohydric species. However, once θ limitations are accounted for, sensitivity of Gc to D remains relatively constant across sites and species. While D limitations to Gc were similar across sites and species, ranging from 16 to 34% reductions, θ limitations to Gc ranged from 0 to 40%. The similarity in species sensitivity to D is encouraging from a modeling perspective, though it implies that substantial reduction to Gc will be experienced by all species in a future characterized by higher D