Linear-time haplotype inference on pedigrees without recombinations and mating loops

In this paper, an optimal linear-time algorithm is presented to solve the haplotype inference problem for pedigree data when there are no recombinations and the pedigree has no mating loops. The approach is based on the use of graphs to capture SNP, Mendelian, and parity constraints of the given pedigree. This representation allows us to capture the constraints as the edges in a graph, rather than as a system of linear equations as in previous approaches. Graph traversals are then used to resolve the parity of these edges, resulting in an optimal running time. © 2009 Society for Industrial and Applied Mathematics.published_or_final_versio

Material Selection for Donor Materials in Small Molecular-Based Bulk Heterojunction Organic Photovoltaic Devices

Poster Presentation: S15- Metal Complexes for Optics: from fundamental to applications: no. S15.P23published_or_final_versio

A Mindfulness Programme for People with Dementia in Care Homes: A Feasibility Pilot Study

Part 1 of the thesis is a literature review examining the effectiveness of mindfulness-based interventions (MBI) for people with acquired cognitive impairment, and whether any modifications were made for this population. The 11 included papers are presented according to the type of acquired cognitive impairment. The effectiveness of the MBIs is considered for each type of acquired cognitive impairment according to different outcomes. This is followed by a discussion of common themes of modification to the MBIs for this population. Part 2 is an empirical study which investigated the feasibility and the potential benefits of an adapted mindfulness programme for people with mild to moderate dementia in care homes using a randomised controlled design. The process of intervention development and outcomes for quality of life, stress and cognition are reported. This paper forms part of a joint research study conducted with Churcher Clarke (2015). She will assess the feasibility of the programme and report outcomes for anxiety, depression and mindfulness. Part 3 is a critical appraisal. It will reflect on the process of conducting the research, including: strengths of the study, my qualitative observations of participants and the care home staff, the main challenges encountered during study design, recruitment, intervention delivery and implementation, and the implications for future research

Hole-transporting spirothioxanthene derivatives as donor materials for efficient small-molecule-based organic photovoltaic devices

Poster: no. 30Taking the advantages of the 3D structure and rigid spiro-conjugation, spirobifluorene and its derivatives are a benchmark class of p-type semiconductors in organic electronic devices because of their good charge-transporting properties. However, their low absorption coefficients within the visible spectrum render their application as photoactive materials in the fabrication of organic photovoltaic (OPV) devices. A new class of heterocyclic spirothioxanthene derivatives has been designed and synthesized by the functionalization of the spiro core with various triarylamine groups and the modification of the heteroatom of the spiro core. The photophysical, electrochemical and thermal properties of these spirothioxanthene derivatives have been fully characterized. Of particular interest, all of these compounds exhibit high hole mobilities of up to 10–3 cm2V–1s–1, as determined from thin film transistor measurement. More importantly, these spirothioxanthene derivatives are promising donor materials for the fabrication of high performance OPV devices. With a very low dopant concentration of 7 % doped into fullerene matrix, efficient small molecular-based OPV devices with high open-circuit voltage of 0.94 V and high power conversion efficiency of 5.40 % (the highest PCE of 5.46 %) have been realized. This demonstrates for the first time their application studies as photovoltaic donor materials in OPV devices.published_or_final_versio

Streptococcus pneumonia serotype 19A bacteremia in a child fully immunized with 10-valent pneumococcal conjugate vaccine

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Invasive fungal rhinosinusitis presenting as Bell's palsy in a kidney and liver transplant recipient

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1α, 25-dihydroxyvitamin D3 suppresses differentiation, maturation and activation of dendritic cells from patients with systemic lupus erythematosus

BACKGROUND: Dendritic cells (DC), professional antigen presenting cells, are believed to play a crucial role in the pathogenesis of systemic lupus erythematosus (SLE). 1α, 25-dihydroxyvitamin D3 (VitD3), in addition to its effect on bone metabolism, has been increasingly recognised to have immunomodulatory effects. OBJECTIVE: To examine the effect of VitD3 on the differentiation, maturation, and activation of DCs in SLE patients. METHODS: CD14+ monocyte–derived DCs from SLE patients and age- and sex-matched controls were derived from growth medium cultured with IL-4, GM-CSF. Mature DCs were induced by addition of lipopolysaccharide and tumour necrosis factor-α in the presence or absence of VitD3 (1×10-10 M) and/or dexamethasone (1×10-6 M). The expression of CD1a, a DC marker and markers of maturation and co-stimulatory molecules such as CD80, CD86, CD40, HLA-DR and CD83 were examined by flow cytometry. After stimulation of DCs with CD40L for 24 hours, the production of pro-inflammatory cytokines including IL-12 and IL-6, were measured by ELISA kits. RESULTS: VitD3 suppresses differentiation of monocytes into DCs as showed by the decreased expression of CD1a (P<0.05). VitD3 inhibits the expression of maturation markers including CD86, CD40 and CD83 (P<0.05), but not CD80 and HLA-DR. This effect was more marked in SLE patients (n=14) than controls (n=9). In combination with dexamethasone, VitD3 displayed more potent immunosuppressive effect on DCs. Under the effect of VitD3, stimulated DCs produced less of IL-12 (3.1 vs 10.4 pg/mL, P=0.02) and IL-6 (216.0 vs 224.0 pg/mL, P=0.21) in SLE patients as well as controls (8.0 vs 36.6 μg/mL, P=0.01 for IL-12) and (380.7 vs 415.2 pg/mL, P=0.04 for IL-6). CONCLUSION: VitD3 is found to inhibit differentiation, maturation, and activation of DCs in vitro in both SLE patients and controls and may be considered as immunomodulatory agent in the treatment of SLE.published_or_final_versionThe 15th Medical Research Conference (15th MRC), Department of Medicine, University of Hong Kong, Hong Kong, 16 January 2010. In Hong Kong Medical Journal, 2010, v. 16 n. 1, suppl. 1, p. 57, abstract no. 9

Distinctive patterns of macrolide-lincosamide-streptogramin resistance phenotypes and determinants amongst Staphylococcus aureus populations in Hong Kong

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Laparoscopic colorectal resections with and without routine mechanical bowel preparation: a comparative study

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Is vocal cord asymmetry seen on transcutaneous laryngeal ultrasonography a significant predictor of voice quality changes after thyroidectomy?

Background: Vocal cord asymmetry (VCA) on laryngoscopic examination (LE) may suggest voice impairment after thyroidectomy, but LE may cause patient discomfort. We aimed to correlate the presence of postoperative VCA assessed by noninvasive transcutaneous laryngeal ultrasonography (TLUSG) with voice quality changes after thyroidectomy. Methods: A total of 169 patients scheduled for thyroidectomy completed two validated voice symptoms questionnaires - the GRBAS (grade, roughness, breathiness, asthenia, strain) scale and the voice impairment score (VIS) - and underwent TLUSG and LE at 1 day before and 7-10 days after thyroidectomy. Postoperative VCA was apparent in 51 patients on TLUSG (group I), whereas there was no VCA in the other 118 patients (group II, controls). The GRBAS scale and VIS results were compared between the groups. Results: Before operation, the two groups had comparable preoperative GRBAS and VIS status. After operation, the "grade" and "roughness" components on the GRBAS scale were significantly worse in group I than in group II: 0.24 versus 0.07 (p = 0.016) and 0.33 versus 0.14 (p = 0.022), respectively. "Grade" and "roughness" in the GRBAS scale significantly worsened after the operation in group I: from 0.04 to 0.24 (p = 0.008) and from 0.02 to 0.33 (p = 0.001), respectively. They did not change in group II. Also, the overall VIS was significantly worse after thyroidectomy in group I: 4.97 versus 12.97 (p < 0.001). Conclusions: VCA seen on TLUSG significantly correlated with "grade" and "roughness" components on the GRBAS scale and the overall VIS. Thus, VCA might be used as a surrogate of postoperative voice changes. © 2013 Société Internationale de Chirurgie.postprin