198 research outputs found
Ab initio study of intermolecular potential of H2O trimer
Nonadditive contribution to the interaction energy in water trimer is analyzed in terms of Heitler–London exchange, SCF deformation, induction and dispersion nonadditivities. Nonadditivity originates mainly from the SCF deformation effect which is due to electric polarization. However, polarization does not serve as a universal mechanism for nonadditivity in water. In the double‐donor configuration, for example, the Heitler–London exchange contribution is the most important and polarization yields the wrong sign. Correlation effects do not contribute significantly to the nonadditivity. A detailed analysis of the pair potential is also provided. The present two‐body potential and its components are compared to the existing ab initio potentials (MCY) as well as to empirical ones (RWK2,TIP,SPC). The ways to improve these potentials are suggested
Genital Human Papillomavirus (HPV) Infections in Men as a Factor for the Development of Cervical Cancer
The prevalence of human papillomavirus (HPV) infection in males is comparable to females, although in men it is largely unknown. HPV infections may be connected with the development of carcinomas and other dermoepithelial changes such as intraepithelial neoplasia. Multidirectional studies have shown that chronic HPV infection is a necessary, though insufficient factor for the development of cervical cancer. Although men are regarded as the dominant vector of HPV transmission to their female sexual partners, they do not develop clinically significant HPV-related lesions and are usually asymptomatic during relatively short infections
Ab initio study of the intermolecular potential of Ar–H2O
The combination of supermolecular Møller–Plesset treatment with the perturbation theory of intermolecular forces is applied in the analysis of the potential‐energy surface of Ar–H2O. The surface is very isotropic with the lowest barrier for rotation of ∼35 cm−1 above the absolute minimum. The lower bound for De is found to be 108 cm−1 and the complex reveals a very floppy structure, with Ar moving freely from the H‐bridged structure to the coplanar and almost perpendicular arrangement of the C2 –water axis and the Ar–O axis, ‘‘T‐shaped’’ structure. This motion is almost isoenergetic (energy change of less than 2 cm−1 ). The H‐bridged structure is favored by the attractive induction and dispersion anisotropies; the T‐shaped structure is favored by repulsive exchange anisotropy. The nonadditive effect in the Ar2–H2O cluster was also calculated. Implications of our results on the present models of hydrophobic interactions are also discussed
Tractable non-local correlation density functionals for flat surfaces and slabs
A systematic approach for the construction of a density functional for van
der Waals interactions that also accounts for saturation effects is described,
i.e. one that is applicable at short distances. A very efficient method to
calculate the resulting expressions in the case of flat surfaces, a method
leading to an order reduction in computational complexity, is presented.
Results for the interaction of two parallel jellium slabs are shown to agree
with those of a recent RPA calculation (J.F. Dobson and J. Wang, Phys. Rev.
Lett. 82, 2123 1999). The method is easy to use; its input consists of the
electron density of the system, and we show that it can be successfully
approximated by the electron densities of the interacting fragments. Results
for the surface correlation energy of jellium compare very well with those of
other studies. The correlation-interaction energy between two parallel jellia
is calculated for all separations d, and substantial saturation effects are
predicted.Comment: 10 pages, 6 figure
Scattering length of the ground state Mg+Mg collision
We have constructed the X 1SIGMAg+ potential for the collision between two
ground state Mg atoms and analyzed the effect of uncertainties in the shape of
the potential on scattering properties at ultra-cold temperatures. This
potential reproduces the experimental term values to 0.2 inverse cm and has a
scattering length of +1.4(5) nm where the error is prodominantly due to the
uncertainty in the dissociation energy and the C6 dispersion coefficient. A
positive sign of the scattering length suggests that a Bose-Einstein condensate
of ground state Mg atoms is stable.Comment: 15 pages, 3 figures, Submitted Phys. Rev.
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Computational Thermochemistry and Benchmarking of Reliable Methods
During the first and second years of the Computational Thermochemistry and Benchmarking of Reliable Methods project, we completed several studies using the parallel computing capabilities of the NWChem software and Molecular Science Computing Facility (MSCF), including large-scale density functional theory (DFT), second-order Moeller-Plesset (MP2) perturbation theory, and CCSD(T) calculations. During the third year, we continued to pursue the computational thermodynamic and benchmarking studies outlined in our proposal. With the issues affecting the robustness of the coupled cluster part of NWChem resolved, we pursued studies of the heats-of-formation of compounds containing 5 to 7 first- and/or second-row elements and approximately 10 to 14 hydrogens. The size of these systems, when combined with the large basis sets (cc-pVQZ and aug-cc-pVQZ) that are necessary for extrapolating to the complete basis set limit, creates a formidable computational challenge, for which NWChem on NWMPP1 is well suited
Solvation Ultrafast Dynamics of Reactions. 14. Molecular Dynamics and ab Initio Studies of Charge-Transfer Reactions of Iodine in Benzene Clusters
ChemInform Abstract: Origins of Structure and Energetics of van der Waals Clusters from ab Initio Calculation.
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