Boundary effects to the entanglement entropy and two-site entanglement of the spin-1 valence-bond solid

We investigate the von Neumann entropy of a block of subsystem for the valence-bond solid (VBS) state with general open boundary conditions. We show that the effect of the boundary on the von Neumann entropy decays exponentially fast in the distance between the subsystem considered and the boundary sites. Further, we show that as the size of the subsystem increases, its von Neumann entropy exponentially approaches the summation of the von Neumann entropies of the two ends, the exponent being related to the size. In contrast to critical systems, where boundary effects to the von Neumann entropy decay slowly, the boundary effects in a VBS, a non-critical system, decay very quickly. We also study the entanglement between two spins. Curiously, while the boundary operators decrease the von Neumann entropy of L spins, they increase the entanglement between two spins.Comment: 4 pages, 2 figures. Physical Review B (in press

A comparison of three methods to determine the subject matter in textual data

This study compares three different methods commonly employed for the determination and interpretation of the subject matter of large corpuses of textual data. The methods reviewed are: (1) topic modeling, (2) community or group detection, and (3) cluster analysis of semantic networks. Two different datasets related to health topics were gathered from Twitter posts to compare the methods. The first dataset includes 16,138 original tweets concerning HIV pre-exposure prophylaxis (PrEP) from April 3, 2019 to April 3, 2020. The second dataset is comprised of 12,613 tweets about childhood vaccination from July 1, 2018 to October 15, 2018. Our findings suggest that the separate “topics” suggested by semantic networks (community detection) and/or cluster analysis (Ward's method) are more clearly identified than the topic modeling results. Topic modeling produced more subjects, but these tended to overlap. This study offers a better understanding of how results may vary based on method to determine subject matter chosen

Effect of nanoparticle loading and magnetic field application on the thermodynamic, optical, and rheological behavior of thermoresponsive polymer solutions

Although processing via external stimuli is a promising technique to tune the structure and properties of polymeric materials, the impact of magnetic fields on phase transitions in thermoresponsive polymer solutions is not well-understood. As nanoparticle (NP) addition is also known to impact these thermodynamic and optical properties, synergistic effects from combining magnetic fields with NP incorporation provide a novel route for tuning material properties. Here, the thermodynamic, optical, and rheological properties of aqueous poly(N-isopropyl acrylamide) (PNIPAM) solutions are examined in the presence of hydrophilic silica NPs and magnetic fields, individually and jointly, via Fourier-transform infrared spectroscopy (FTIR), magneto-turbidimetry, differential scanning calorimetry (DSC), and magneto-rheology. While NPs and magnetic fields both reduce the phase separation energy barrier and lower optical transition temperatures by altering hydrogen bonding (H-bonding), infrared spectra demonstrate that the mechanism by which these changes occur is distinct. Magnetic fields primarily alter solvent polarization while NPs provide PNIPAM–NP H-bonding sites. Combining NP addition with field application uniquely alters the solution environment and results in field-dependent rheological behavior that is unseen in polymer-only solutions. These investigations provide fundamental understanding on the interplay of magnetic fields and NP addition on PNIPAM thermoresponsivity which can be harnessed for increasingly complex stimuli-responsive materials

Etna International Training School of Geochemistry. Science meets Practice

Also this year, the “Etna International Training School of Geochemistry. Science meets practice” took place at Mt. Etna, now in its fourth edition. The school was hosted in the historical Volcanological Observatory “Pizzi Deneri”, one of the most important sites of the INGV - Osservatorio Etneo for geochemical and geophysical monitoring. Mount Etna, located in eastern Sicily, is the largest active volcano in Europe and one of the most intensely degassing volcanoes of the world [Allard et al., 1991; Gerlach, 1991]. Mt Etna emits about 1.6 % of global H2O fluxes from arc volcanism [Aiuppa et al., 2008] and 10 % of global average volcanic emission of CO2 and SO2 [D’Alessandro et al., 1997; Caltabiano et al., 2004; Aiuppa et al., 2008; Carn et al., 2017]. Furthermore, Gauthier and Le Cloarec, [1998] underscored that Mt. Etna is an important source of volcanic particles, having a mass flux of particle passively released from the volcano during non-eruptive period estimated between 7 to 23 tons/day [Martin et al., 2008; Calabrese et al., 2011]. In general, Etna is considered to be still under evolution and rather ‘friendly’, which, along with the above, makes it a favorable natural laboratory to study volcanic geochemistry. The Observatory Pizzi Deneri was sponsored by Haroun Tazieff, and it was built in 1978 by the CNR - International Institute of Volcanology under the direction of Prof. Letterio Villari. It is located at the base of the North-East crater (2,850 m a.s.l.), near the Valle del Leone and it was built on the rim of the Ellittico caldera. A picturesque building, consisting of two characteristics domes in front of the breath-taking panorama of the summit craters. Even though it is quite spartan as an accommodation facility, the dormitories, kitchen, seminar room and laboratory are well equipped. In other words, the Pizzi Deneri observatory is a unique place close to the top of the most active volcano of Europe. The observatory lies in a strategic location making it one of the most important sites for monitoring, research and dissemination of the scientific culture. After six field multidisciplinary campaigns (2010-2015) organized by a group of researchers of several institutions (INGV of Palermo, Catania, Naples, Bologna; Universities of Palermo, Florence, Mainz, Heidelberg), the idea of sharing and passing on the experience to the new generation of students has materialized, and the “Etna International Training School of Geochemistry. Science meets practice” was born in 2016. The four editions of the school were partially funded by INGV of Palermo and Catania, European Geoscience Union (EGU), Società Geochimica Italiana (SoGeI) and Associazione Naturalistica Geode. The conceptual idea of the school is to share scientific knowledge and experiences in the geochemical community, using local resources with a low-cost organization in order to allow as many students as possible access to the school. The “Etna International Training School of Geochemistry. Science meets practice” is addressed to senior graduate students, postdoctoral researchers, fellows, and newly appointed assistant professors, aiming to bring together the next generation of researchers active in studies concerning the geochemistry and the budget of volcanic gases. Introduce the participants with innovative direct sampling and remote sensing techniques. Furthermore, it gives young scientists an opportunity to experiment and evaluate new protocols and techniques to be used on volcanic fluid emissions covering a broad variety of methods. The teaching approach includes theoretical sessions (lectures), practical demonstrations and field applications, conducted by international recognized geochemists. We thank all the teachers who helped to make the school possible, among these: Tobias Fischer (University of New Mexico Albuquerque), Jens Fiebig (Institut für Geowissenschaften Goethe-Universität Frankfurt am Main), Andri Stefansson (University of Iceland, Institute of Earth Sciences), Mike Burton (University of Manchester), Nicole Bobrowski (Universität Heidelberg Institute of Environmental Physics and Max Planck Institute for Chemistry), Alessandro Aiuppa (Università di Palermo), Franco Tassi (Università di Firenze), Walter D’Alessandro (INGV of Palermo), Fatima Viveiros (University of the Azores). Direct sampling of high-to-low temperature fumaroles, plume measurement techniques (using CO2/SO2 sensors such as Multi-GAS instruments, MAX-DOAS instruments and UV SO2 cameras, alkaline traps and particle filters), measurement of diffuse soil gas fluxes of endogenous gases (CO2, Hg0, CH4 and light hydrocarbons), sampling of mud volcanoes, groundwaters and bubbling gases. Sampling sites include the active summit craters, eruptive fractures and peripheral areas. The students have shown an active participation both to the lessons and the fieldworks. Most of them describe the school as formative and useful experience for their future researches. Their enthusiasm is the real engine of this school

Etna International Training School of Geochemistry. Science meets Practice

Also this year, the \u201cEtna International Training School of Geochemistry. Science meets practice\u201d took place at Mt. Etna, now in its fourth edition. The school was hosted in the historical Volcanological Observatory \u201cPizzi Deneri\u201d, one of the most important sites of the INGV - Osservatorio Etneo for geochemical and geophysical monitoring. Mount Etna, located in eastern Sicily, is the largest active volcano in Europe and one of the most intensely degassing volcanoes of the world [Allard et al., 1991; Gerlach, 1991]. Mt Etna emits about 1.6 % of global H2O fluxes from arc volcanism [Aiuppa et al., 2008] and 10 % of global average volcanic emission of CO2 and SO2 [D\u2019Alessandro et al., 1997; Caltabiano et al., 2004; Aiuppa et al., 2008; Carn et al., 2017]. Furthermore, Gauthier and Le Cloarec, [1998] underscored that Mt. Etna is an important source of volcanic particles, having a mass flux of particle passively released from the volcano during non-eruptive period estimated between 7 to 23 tons/day [Martin et al., 2008; Calabrese et al., 2011]. In general, Etna is considered to be still under evolution and rather \u2018friendly\u2019, which, along with the above, makes it a favorable natural laboratory to study volcanic geochemistry. The Observatory Pizzi Deneri was sponsored by Haroun Tazieff, and it was built in 1978 by the CNR - International Institute of Volcanology under the direction of Prof. Letterio Villari. It is located at the base of the North-East crater (2,850 m a.s.l.), near the Valle del Leone and it was built on the rim of the Ellittico caldera. A picturesque building, consisting of two characteristics domes in front of the breath-taking panorama of the summit craters. Even though it is quite spartan as an accommodation facility, the dormitories, kitchen, seminar room and laboratory are well equipped. In other words, the Pizzi Deneri observatory is a unique place close to the top of the most active volcano of Europe. The observatory lies in a strategic location making it one of the most important sites for monitoring, research and dissemination of the scientific culture. After six field multidisciplinary campaigns (2010-2015) organized by a group of researchers of several institutions (INGV of Palermo, Catania, Naples, Bologna; Universities of Palermo, Florence, Mainz, Heidelberg), the idea of sharing and passing on the experience to the new generation of students has materialized, and the \u201cEtna International Training School of Geochemistry. Science meets practice\u201d was born in 2016. The four editions of the school were partially funded by INGV of Palermo and Catania, European Geoscience Union (EGU), Societ\ue0 Geochimica Italiana (SoGeI) and Associazione Naturalistica Geode. The conceptual idea of the school is to share scientific knowledge and experiences in the geochemical community, using local resources with a low-cost organization in order to allow as many students as possible access to the school. The \u201cEtna International Training School of Geochemistry. Science meets practice\u201d is addressed to senior graduate students, postdoctoral researchers, fellows, and newly appointed assistant professors, aiming to bring together the next generation of researchers active in studies concerning the geochemistry and the budget of volcanic gases. Introduce the participants with innovative direct sampling and remote sensing techniques. Furthermore, it gives young scientists an opportunity to experiment and evaluate new protocols and techniques to be used on volcanic fluid emissions covering a broad variety of methods. The teaching approach includes theoretical sessions (lectures), practical demonstrations and field applications, conducted by international recognized geochemists. We thank all the teachers who helped to make the school possible, among these: Tobias Fischer (University of New Mexico Albuquerque), Jens Fiebig (Institut f\ufcr Geowissenschaften Goethe-Universit\ue4t Frankfurt am Main), Andri Stefansson (University of Iceland, Institute of Earth Sciences), Mike Burton (University of Manchester), Nicole Bobrowski (Universit\ue4t Heidelberg Institute of Environmental Physics and Max Planck Institute for Chemistry), Alessandro Aiuppa (Universit\ue0 di Palermo), Franco Tassi (Universit\ue0 di Firenze), Walter D\u2019Alessandro (INGV of Palermo), Fatima Viveiros (University of the Azores). Direct sampling of high-to-low temperature fumaroles, plume measurement techniques (using CO2/SO2 sensors such as Multi-GAS instruments, MAX-DOAS instruments and UV SO2 cameras, alkaline traps and particle filters), measurement of diffuse soil gas fluxes of endogenous gases (CO2, Hg0, CH4 and light hydrocarbons), sampling of mud volcanoes, groundwaters and bubbling gases. Sampling sites include the active summit craters, eruptive fractures and peripheral areas. The students have shown an active participation both to the lessons and the fieldworks. Most of them describe the school as formative and useful experience for their future researches. Their enthusiasm is the real engine of this school

Gain of Function Mutations in CgPDR1 of Candida glabrata Not Only Mediate Antifungal Resistance but Also Enhance Virulence

CgPdr1p is a Candida glabrata Zn(2)-Cys(6) transcription factor involved in the regulation of the ABC-transporter genes CgCDR1, CgCDR2, and CgSNQ2, which are mediators of azole resistance. Single-point mutations in CgPDR1 are known to increase the expression of at least CgCDR1 and CgCDR2 and thus to contribute to azole resistance of clinical isolates. In this study, we investigated the incidence of CgPDR1 mutations in a large collection of clinical isolates and tested their relevance, not only to azole resistance in vitro and in vivo, but also to virulence. The comparison of CgPDR1 alleles from azole-susceptible and azole-resistant matched isolates enabled the identification of 57 amino acid substitutions, each positioned in distinct CgPDR1 alleles. These substitutions, which could be grouped into three different “hot spots,” were gain of function (GOF) mutations since they conferred hyperactivity to CgPdr1p revealed by constitutive high expression of ABC-transporter genes. Interestingly, the major transporters involved in azole resistance (CgCDR1, CgCDR2, and CgSNQ2) were not always coordinately expressed in presence of specific CgPDR1 GOF mutations, thus suggesting that these are rather trans-acting elements (GOF in CgPDR1) than cis-acting elements (promoters) that lead to azole resistance by upregulating specific combinations of ABC-transporter genes. Moreover, C. glabrata isolates complemented with CgPDR1 hyperactive alleles were not only more virulent in mice than those with wild type alleles, but they also gained fitness in the same animal model. The presence of CgPDR1 hyperactive alleles also contributed to fluconazole treatment failure in the mouse model. In conclusion, this study shows for the first time that CgPDR1 mutations are not only responsible for in vitro/in vivo azole resistance but that they can also confer a selective advantage under host conditions

A Nonparametric Test Reveals Selection for Rapid Flowering in the Arabidopsis Genome

The detection of footprints of natural selection in genetic polymorphism data is fundamental to understanding the genetic basis of adaptation, and has important implications for human health. The standard approach has been to reject neutrality in favor of selection if the pattern of variation at a candidate locus was significantly different from the predictions of the standard neutral model. The problem is that the standard neutral model assumes more than just neutrality, and it is almost always possible to explain the data using an alternative neutral model with more complex demography. Today's wealth of genomic polymorphism data, however, makes it possible to dispense with models altogether by simply comparing the pattern observed at a candidate locus to the genomic pattern, and rejecting neutrality if the pattern is extreme. Here, we utilize this approach on a truly genomic scale, comparing a candidate locus to thousands of alleles throughout the Arabidopsis thaliana genome. We demonstrate that selection has acted to increase the frequency of early-flowering alleles at the vernalization requirement locus FRIGIDA. Selection seems to have occurred during the last several thousand years, possibly in response to the spread of agriculture. We introduce a novel test statistic based on haplotype sharing that embraces the problem of population structure, and so should be widely applicable