Modelling forest landscape dynamics in Glen Affric, northern Scotland

Consideration of forest management at the landscape scale is essential if commitments to the conservation of biodiversity are to be upheld. The ecosystem management approach, developed largely in North America, has made use of various landscape modelling tools to assist in planning for biodiversity maintenance and ecological restoration. The roles of habitat suitability models, metapopulation models, spatially explicit population models (SEPMs) and forest landscape dynamics models (FLDMs) in the planning process are discussed and a review of forest dynamics models is presented. Potential is identified for developing landscape models in the UK for both landscape restoration projects and semi-natural woodland management. Glen Affric, in northern Scotland contains a large area of native pine and birch woodland and is the subject of a long-term restoration project. A new model, GALDR (Glen Affric Landscape Dynamics Reconstruction) is introduced and is believed to be the first FLDM developed for British woodland. The theory behind the model is described in detail and preliminary results and sensitivity analyses are presented. Furthermore, GALAM (Glen Affric Lichen Abundance Model), a new SEPM for the rare epiphytic lichen Bryoria furcellata is also described. Results of simulations from the linked GALDR and GALAM models are presented which shed light on the role of landscape heterogeneity in determining the dynamics of lichen habitats and populations. It is concluded that, whilst much work will be required to develop a management-oriented decision support system from the GALDR model, the modelling process may aid researchers in the identification of knowledge gaps in ecological theory relevant to management and restoration

Genomic analysis of 48 paenibacillus larvae bacteriophages

Indexación: Scopus.Funding: Research at UNLV was funded by National Institute of General Medical Sciences grant GM103440 (NV INBRE), the UNLV School of Life Sciences, and the UNLV College of Sciences. E.C.-N. was funded by CONICYT-FONDECYT de iniciación en la investigación 11160905. Research at BYU was funded by the BYU Microbiology & Molecular Biology Department, and private donations through LDS Philanthropies.The antibiotic-resistant bacterium Paenibacillus larvae is the causative agent of American foulbrood (AFB), currently the most destructive bacterial disease in honeybees. Phages that infect P. larvae were isolated as early as the 1950s, but it is only in recent years that P. larvae phage genomes have been sequenced and annotated. In this study we analyze the genomes of all 48 currently sequenced P. larvae phage genomes and classify them into four clusters and a singleton. The majority of P. larvae phage genomes are in the 38–45 kbp range and use the cohesive ends (cos) DNA-packaging strategy, while a minority have genomes in the 50–55 kbp range that use the direct terminal repeat (DTR) DNA-packaging strategy. The DTR phages form a distinct cluster, while the cos phages form three clusters and a singleton. Putative functions were identified for about half of all phage proteins. Structural and assembly proteins are located at the front of the genome and tend to be conserved within clusters, whereas regulatory and replication proteins are located in the middle and rear of the genome and are not conserved, even within clusters. All P. larvae phage genomes contain a conserved N-acetylmuramoyl-L-alanine amidase that serves as an endolysin. © 2018 by the authors. Licensee MDPI, Basel, Switzerland.https://www.mdpi.com/1999-4915/10/7/37

Smallholder Participation in Agricultural Value Chains: Comparative Evidence from Three Continents

Supermarkets, specialized wholesalers, and processors and agro-exporters’ agricultural value chains have begun to transform the marketing channels into which smallholder farmers sell produce in low-income economies. We develop a conceptual framework through which to study contracting between smallholders and a commodity-processing firm. We then conduct an empirical meta-analysis of agricultural value chains in five countries across three continents (Ghana, India, Madagascar, Mozambique, and Nicaragua). We document patterns of participation, the welfare gains associated with participation, reasons for non-participation, the significant extent of contract non-compliance, and the considerable dynamism of these value chains, as farmers and firms enter and exit frequently.

Classical noise and flux: the limits of multi-state atom lasers

By direct comparison between experiment and theory, we show how the classical noise on a multi-state atom laser beam increases with increasing flux. The trade off between classical noise and flux is an important consideration in precision interferometric measurement. We use periodic 10 microsecond radio-frequency pulses to couple atoms out of an F=2 87Rb Bose-Einstein condensate. The resulting atom laser beam has suprising structure which is explained using three dimensional simulations of the five state Gross-Pitaevskii equations.Comment: 4 pages, 3 figure

Palliative management of refractory dyspnea in COPD

COPD is a progressive illness with worldwide impact. Patients invariably reach a point at which they require palliative interventions. Dyspnea is the most distressing symptom experienced by these patients; when not relieved by traditional COPD management strategies it is termed “refractory dyspnea” and palliative approaches are required. The focus of care shifts from prolonging survival to reducing symptoms, increasing function, and improving quality of life. Numerous pharmacological and non-pharmacological interventions can achieve these goals, though evidence supporting their use is variable. This review provides a summary of the options for the management of refractory dyspnea in COPD, outlining currently available evidence and highlighting areas for further investigation. Topics include oxygen, opioids, psychotropic drugs, inhaled furosemide, Heliox, rehabilitation, nutrition, psychosocial support, breathing techniques, and breathlessness clinics

Smallholder Participation in Agricultural Value Chains: Comparative Evidence from Three Continents

Supermarkets, specialized wholesalers, and processors and agro-exporters’ agricultural value chains have begun to transform the marketing channels into which smallholder farmers sell produce in low-income economies. We develop a conceptual framework through which to study contracting between smallholders and a commodity-processing firm. We then conduct an empirical meta-analysis of agricultural value chains in five countries across three continents (Ghana, India, Madagascar, Mozambique, and Nicaragua). We document patterns of participation, the welfare gains associated with participation, reasons for non-participation, the significant extent of contract non-compliance, and the considerable dynamism of these value chains, as farmers and firms enter and exit frequently.Agricultural Value Chains, Contract Farming, Africa, Asia, Latin America

Extreme rainfall and the Turkwel Gorge Dam in Kenya: Understanding risks and management priorities (REACH Policy brief)

Lakes along the Great African Rift System from Ethiopia to Tanzania are at their highest levels in decades. The rising water poses multiple hazards including contamination, landslides, and flooding affecting millions of lives. In November 2020, authorities shared concerns of a potential overflowing of the Turkwel Gorge Dam due to excessive rains. The potential flooding could affect over 300,000 people in an area accustomed to droughts. This brief discusses how understanding rainfall variability can provide lessons for managing dams in drylands to improve water security for energy, agriculture, environmental and human needs

Effects of Measurement back-action in the stabilization of a Bose-Einstein condensate through feedback

We apply quantum filtering and control to a particle in a harmonic trap under continuous position measurement, and show that a simple static feedback law can be used to cool the system. The final steady state is Gaussian and dependent on the feedback strength and coupling between the system and probe. In the limit of weak coupling this final state becomes the ground state. An earlier model by Haine et. al. (PRA 69, 2004) without measurement back-action showed dark states: states that did not display error signals, thus remaining unaffected by the control. This paper shows that for a realistic measurement process this is not true, which indicates that a Bose-Einstein condensate may be driven towards the ground state from any arbitrary initial state.Comment: 1 Tex, 4 PS pictures, 1 bbl fil

Effect of silver content on the structure and antibacterial activity of silver-doped phosphate-based glasses

Staphylococcus aureus can cause a range of diseases, such as osteomyelitis, as well as colonize implanted medical devices. In most instances the organism forms biofilms that not only are resistant to the body's defense mechanisms but also display decreased susceptibilities to antibiotics. In the present study, we have examined the effect of increasing silver contents in phosphate-based glasses to prevent the formation of S. aureus biofilms. Silver was found to be an effective bactericidal agent against S. aureus biofilms, and the rate of silver ion release (0.42 to 1.22 µg·mm–2·h–1) from phosphate-based glass was found to account for the variation in its bactericidal effect. Analysis of biofilms by confocal microscopy indicated that they consisted of an upper layer of viable bacteria together with a layer (20 µm) of nonviable cells on the glass surface. Our results showed that regardless of the silver contents in these glasses (10, 15, or 20 mol%) the silver exists in its +1 oxidation state, which is known to be a highly effective bactericidal agent compared to that of silver in other oxidation states (+2 or +3). Analysis of the glasses by 31P nuclear magnetic resonance imaging and high-energy X-ray diffraction showed that it is the structural rearrangement of the phosphate network that is responsible for the variation in silver ion release and the associated bactericidal effectiveness. Thus, an understanding of the glass structure is important in interpreting the in vitro data and also has important clinical implications for the potential use of the phosphate-based glasses in orthopedic applications to deliver silver ions to combat S. aureus biofilm infections