9,566 research outputs found
Diffusion on a hypercubic lattice with pinning potential: exact results for the error-catastrophe problem in biological evolution
In the theoretical biology framework one fundamental problem is the so-called
error catastrophe in Darwinian evolution models. We reexamine Eigen's
fundamental equations by mapping them into a polymer depinning transition
problem in a ``genotype'' space represented by a unitary hypercubic lattice.
The exact solution of the model shows that error catastrophe arises as a direct
consequence of the equations involved and confirms some previous qualitative
results. The physically relevant consequence is that such equations are not
adequate to properly describe evolution of complex life on the Earth.Comment: 10 pages in LaTeX. Figures are available from the authors.
[email protected] (e-mail address
Molecular Evolution in Time Dependent Environments
The quasispecies theory is studied for dynamic replication landscapes. A
meaningful asymptotic quasispecies is defined for periodic time dependencies.
The quasispecies' composition is constantly changing over the oscillation
period. The error threshold moves towards the position of the time averaged
landscape for high oscillation frequencies and follows the landscape closely
for low oscillation frequencies.Comment: 5 pages, 3 figures, Latex, uses Springer documentclass llncs.cl
Global Fits of the CKM Matrix
We report upon the present status of global fits to Cabibbo-Kobayashi-Maskawa
matrix.Comment: 3 pages, 3 figures invited talk presented at EPS conference, Aachen
July 17-2
Eigen model as a quantum spin chain: exact dynamics
We map Eigen model of biological evolution [Naturwissenschaften {\bf 58}, 465
(1971)] into a one-dimensional quantum spin model with non-Hermitean
Hamiltonian. Based on such a connection, we derive exact relaxation periods for
the Eigen model to approach static energy landscape from various initial
conditions. We also study a simple case of dynamic fitness function.Comment: 10 pages. Physical Revew E vol. 69, in press (2004
Error Thresholds on Dynamic Fittness-Landscapes
In this paper we investigate error-thresholds on dynamics fitness-landscapes.
We show that there exists both lower and an upper threshold, representing
limits to the copying fidelity of simple replicators. The lower bound can be
expressed as a correction term to the error-threshold present on a static
landscape. The upper error-threshold is a new limit that only exists on dynamic
fitness-landscapes. We also show that for long genomes on highly dynamic
fitness-landscapes there exists a lower bound on the selection pressure needed
to enable effective selection of genomes with superior fitness independent of
mutation rates, i.e., there are distinct limits to the evolutionary parameters
in dynamic environments.Comment: 5 page
Group selection models in prebiotic evolution
The evolution of enzyme production is studied analytically using ideas of the
group selection theory for the evolution of altruistic behavior. In particular,
we argue that the mathematical formulation of Wilson's structured deme model
({\it The Evolution of Populations and Communities}, Benjamin/Cumings, Menlo
Park, 1980) is a mean-field approach in which the actual environment that a
particular individual experiences is replaced by an {\it average} environment.
That formalism is further developed so as to avoid the mean-field approximation
and then applied to the problem of enzyme production in the prebiotic context,
where the enzyme producer molecules play the altruists role while the molecules
that benefit from the catalyst without paying its production cost play the
non-altruists role. The effects of synergism (i.e., division of labor) as well
as of mutations are also considered and the results of the equilibrium analysis
are summarized in phase diagrams showing the regions of the space of parameters
where the altruistic, non-altruistic and the coexistence regimes are stable. In
general, those regions are delimitated by discontinuous transition lines which
end at critical points.Comment: 22 pages, 10 figure
Measurement of the B Semileptonic Branching Fraction with Lepton Tags
We have used the CLEO II detector and 2.06fb^(-1) of ϒ(4S) data to measure the B-meson semileptonic branching fraction. The B→Xeν momentum spectrum was obtained over nearly the full momentum range by using charge and kinematic correlations in events with a high-momentum lepton tag and an additional electron. We find B(B→Xeν) = (10.49±0.17±0.43)%, with overall systematic uncertainties less than those of untagged single-lepton measurements. We use this result to calculate the magnitude of the Cabibbo-Kobayashi-Maskawa matrix element V_(cb) and to set an upper limit on the fraction of ϒ(4S) decays to final states other than BB̅
- …