The JWST FRESCO Survey: Legacy NIRCam/Grism Spectroscopy and Imaging in the two GOODS Fields

We present the JWST Cycle 1 53.8hr medium program FRESCO, short for “First Reionization Epoch Spectroscopically Complete Observations”. FRESCO covers 62 arcmin2 in each of the two GOODS/CANDELS fields for a total area of 124 arcmin2 exploiting JWST’s powerful new grism spectroscopic capabilities at near-infrared wavelengths. By obtaining ∼2hr deep NIRCam/grism observations with the F444W filter, FRESCO yields unprecedented spectra at R ∼ 1600 covering 3.8 to 5.0 μm for most galaxies in the NIRCam field-of-view. This setup enables emission line measurements over most of cosmic history, from strong PAH lines at z ∼ 0.2 − 0.5, to Paα and Paβ at z ∼ 1 − 3, HeI and [SIII] at z ∼ 2.5 − 4.5, Hα and [NII] at z ∼ 5 − 6.5, up to [OIII] and Hβ for z∼7-9 galaxies. FRESCO’s grism observations provide total line fluxes for accurately estimating galaxy stellar masses and calibrating slit-loss corrections of NIRSpec/MSA spectra in the same field. Additionally, FRESCO results in a mosaic of F182M, F210M, and F444W imaging in the same fields to a depth of ∼28.2 mag (5 σ in 0${_{.}^{\prime\prime}}$32 diameter apertures). Here, we describe the overall survey design and the key science goals that can be addressed with FRESCO. We also highlight several, early science results, including: spectroscopic redshifts of Lyman break galaxies that were identified almost 20 years ago, the discovery of broad-line active galactic nuclei at z > 4, and resolved Paα maps of galaxies at z ∼ 1.4. These results demonstrate the enormous power for serendipitous discovery of NIRCam/grism observations

The JWST FRESCO Survey:Legacy NIRCam/Grism Spectroscopy and Imaging in the two GOODS Fields

We present the JWST cycle 1 53.8 h medium program FRESCO, short for 'First Reionization Epoch Spectroscopically Complete Observations'. FRESCO covers 62 arcmin2 in each of the two GOODS/CANDELS fields for a total area of 124 arcmin2 exploiting JWST's powerful new grism spectroscopic capabilities at near-infrared wavelengths. By obtaining ∼2 h deep NIRCam/grism observations with the F444W filter, FRESCO yields unprecedented spectra at R ∼1600 covering 3.8-5.0 μm for most galaxies in the NIRCam field of view. This setup enables emission line measurements over most of cosmic history, from strong PAH lines at z ∼0.2-0.5, to Pa α and Pa β at z ∼1-3, He i and [S iii] at z ∼2.5-4.5, H α and [N ii] at z ∼5-6.5, up to [O iii] and H β for z ∼7-9 galaxies. FRESCO's grism observations provide total line fluxes for accurately estimating galaxy stellar masses and calibrating slit-loss corrections of NIRSpec/MSA spectra in the same field. Additionally, FRESCO results in a mosaic of F182M, F210M, and F444W imaging in the same fields to a depth of ∼28.2 mag (5σ in 032 diameter apertures). Here, we describe the overall survey design and the key science goals that can be addressed with FRESCO. We also highlight several, early science results, including: spectroscopic redshifts of Lyman break galaxies that were identified almost 20 yr ago, the discovery of broad-line active galactic nuclei at z &gt; 4, and resolved Pa α maps of galaxies at z ∼1.4. These results demonstrate the enormous power for serendipitous discovery of NIRCam/grism observations.</p

The JWST FRESCO Survey: Legacy NIRCam/Grism Spectroscopy and Imaging in the two GOODS Fields

We present the JWST Cycle 1 53.8hr medium program FRESCO, short for "First Reionization Epoch Spectroscopically Complete Observations". FRESCO covers 62 arcmin$^2$ in each of the two GOODS/CANDELS fields for a total area of 124 arcmin$^2$ exploiting JWST's powerful new grism spectroscopic capabilities at near-infrared wavelengths. By obtaining ~2 hr deep NIRCam/grism observations with the F444W filter, FRESCO yields unprecedented spectra at R~1600 covering 3.8 to 5.0 $\mu$m for most galaxies in the NIRCam field-of-view. This setup enables emission line measurements over most of cosmic history, from strong PAH lines at z~0.2-0.5, to Pa$\alpha$ and Pa$\beta$ at z~1-3, HeI and [SIII] at z~2.5-4.5, H$\alpha$ and [NII] at z~5-6.5, up to [OIII] and H$\beta$ for z~7-9 galaxies, and possibly even [OII] at z~10-12. FRESCO's grism observations provide total line fluxes for accurately estimating galaxy stellar masses and calibrating slit-loss corrections of NIRSpec/MSA spectra in the same field. Additionally, FRESCO results in a mosaic of F182M, F210M, and F444W imaging in the same fields to a depth of ~28.2 mag (5 $\sigma$ in 0.32" diameter apertures). Together with this publication, the v1 imaging mosaics are released as high-level science products via MAST. Here, we describe the overall survey design and the key science goals that can be addressed with FRESCO. We also highlight several, early science results, including: spectroscopic redshifts of Lyman break galaxies that were identified almost 20 years ago, the discovery of broad-line active galactic nuclei at z>4, and resolved Pa$\alpha$ maps of galaxies at z~1.4. These results demonstrate the enormous power for serendipitous discovery of NIRCam/grism observations. Given the wealth of ancillary data available in these fields, the zero-proprietary time FRESCO data is poised to enable a large amount of legacy science by the community.Comment: 11 pages, 11 figures; submitted to MNRAS; for more information on the survey and data releases, see http://jwst-fresco.astro.unige.ch

Comparative Genomics Suggests that the Fungal Pathogen Pneumocystis Is an Obligate Parasite Scavenging Amino Acids from Its Host's Lungs

Pneumocystis jirovecii is a fungus causing severe pneumonia in immuno-compromised patients. Progress in understanding its pathogenicity and epidemiology has been hampered by the lack of a long-term in vitro culture method. Obligate parasitism of this pathogen has been suggested on the basis of various features but remains controversial. We analysed the 7.0 Mb draft genome sequence of the closely related species Pneumocystis carinii infecting rats, which is a well established experimental model of the disease. We predicted 8’085 (redundant) peptides and 14.9% of them were mapped onto the KEGG biochemical pathways. The proteome of the closely related yeast Schizosaccharomyces pombe was used as a control for the annotation procedure (4’974 genes, 14.1% mapped). About two thirds of the mapped peptides of each organism (65.7% and 73.2%, respectively) corresponded to crucial enzymes for the basal metabolism and standard cellular processes. However, the proportion of P. carinii genes relative to those of S. pombe was significantly smaller for the “amino acid metabolism” category of pathways than for all other categories taken together (40 versus 114 against 278 versus 427, P<0.002). Importantly, we identified in P. carinii only 2 enzymes specifically dedicated to the synthesis of the 20 standard amino acids. By contrast all the 54 enzymes dedicated to this synthesis reported in the KEGG atlas for S. pombe were detected upon reannotation of S. pombe proteome (2 versus 54 against 278 versus 427, P<0.0001). This finding strongly suggests that species of the genus Pneumocystis are scavenging amino acids from their host's lung environment. Consequently, they would have no form able to live independently from another organism, and these parasites would be obligate in addition to being opportunistic. These findings have implications for the management of patients susceptible to P. jirovecii infection given that the only source of infection would be other humans

MyD88 in lung resident cells governs airway inflammatory and pulmonary function responses to organic dust treatment

Inhalation of organic dusts within agriculture environments contributes to the development and/or severity of airway diseases, including asthma and chronic bronchitis. MyD88 KO (knockout) mice are nearly completely protected against the inflammatory and bronchoconstriction effects induced by acute organic dust extract (ODE) treatments. However, the contribution of MyD88 in lung epithelial cell responses remains unclear. In the present study, we first addressed whether ODE-induced changes in epithelial cell responses were MyD88-dependent by quantitating ciliary beat frequency and cell migration following wounding by electric cell-substrate impedance sensing. We demonstrate that the normative ciliary beat slowing response to ODE is delayed in MyD88 KO tracheal epithelial cells as compared to wild type (WT) control. Similarly, the normative ODE-induced slowing of cell migration in response to wound repair was aberrant in MyD88 KO cells. Next, we created MyD88 bone marrow chimera mice to investigate the relative contribution of MyD88-dependent signaling in lung resident (predominately epithelial cells) versus hematopoietic cells. Importantly, we demonstrate that ODE-induced airway hyperresponsiveness is MyD88-dependent in lung resident cells, whereas MyD88 action in hematopoietic cells is mainly responsible for ODE-induced TNF-α release. MyD88 signaling in lung resident and hematopoietic cells are necessary for ODE-induced IL-6 and neutrophil chemoattractant (CXCL1 and CXCL2) release and neutrophil influx. Collectively, these findings underscore an important role for MyD88 in lung resident cells for regulating ciliary motility, wound repair and inflammatory responses to ODE, and moreover, show that airway hyperresponsiveness appears uncoupled from airway inflammatory consequences to organic dust challenge in terms of MyD88 involvement. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12931-015-0272-9) contains supplementary material, which is available to authorized users

The JWST FRESCO survey: legacy NIRCam/grism spectroscopy and imaging in the two GOODS fields

We present the JWST cycle 1 53.8 h medium program FRESCO, short for 'First Reionization Epoch Spectroscopically Complete Observations'. FRESCO covers 62 arcmin2 in each of the two GOODS/CANDELS fields for a total area of 124 arcmin2 exploiting JWST's powerful new grism spectroscopic capabilities at near-infrared wavelengths. By obtaining ∼2 h deep NIRCam/grism observations with the F444W filter, FRESCO yields unprecedented spectra at R ∼1600 covering 3.8-5.0 μm for most galaxies in the NIRCam field of view. This setup enables emission line measurements over most of cosmic history, from strong PAH lines at z ∼0.2-0.5, to Pa α and Pa β at z ∼1-3, He i and [S iii] at z ∼2.5-4.5, H α and [N ii] at z ∼5-6.5, up to [O iii] and H β for z ∼7-9 galaxies. FRESCO's grism observations provide total line fluxes for accurately estimating galaxy stellar masses and calibrating slit-loss corrections of NIRSpec/MSA spectra in the same field. Additionally, FRESCO results in a mosaic of F182M, F210M, and F444W imaging in the same fields to a depth of ∼28.2 mag (5σ in 032 diameter apertures). Here, we describe the overall survey design and the key science goals that can be addressed with FRESCO. We also highlight several, early science results, including: spectroscopic redshifts of Lyman break galaxies that were identified almost 20 yr ago, the discovery of broad-line active galactic nuclei at z > 4, and resolved Pa α maps of galaxies at z ∼1.4. These results demonstrate the enormous power for serendipitous discovery of NIRCam/grism observations

Diversity of Pneumocystis in animals, implications of host specificity for human infection

International audienc

Diversity of Pneumocystis in animals, implications of host specificity for human infection

International audienc