Detection of classic and cryptic Strongyloides genotypes by deep amplicon sequencing: A preliminary survey of dog and human specimens collected from remote Australian communities

© 2019 This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. Strongyloidiasis is caused by the human infective nematodes Strongyloides stercoralis, Strongyloides fuelleborni subsp. fuelleborni and Strongyloides fuelleborni subsp. kellyi. The zoonotic potential of S. stercoralis and the potential role of dogs in the maintenance of strongyloidiasis transmission has been a topic of interest and discussion for many years. In Australia, strongyloidiasis is prevalent in remote socioeconomically disadvantaged communities in the north of the continent. Being an isolated continent that has been separated from other regions for a long geological period, description of diversity of Australian Strongyloides genotypes adds to our understanding of the genetic diversity within the genus. Using PCR and amplicon sequencing (Illumina sequencing technology), we sequenced the Strongyloides SSU rDNA hyper-variable I and hyper-variable IV regions using Strongyloides-specific primers, and a fragment of the mtDNA cox1 gene using primers that are broadly specific for Strongyloides sp. and hookworms. These loci were amplified from DNA extracted from Australian human and dog faeces, and one human sputum sample. Using this approach, we confirm for the first time that potentially zoonotic S. stercoralis populations are present in Australia, suggesting that dogs represent a potential reservoir of human strongyloidiasis in remote Australian communities

Cuando la morfología y los marcadores moleculares entran en conflicto: el ejemplo de los anfípodos subterráneos de la región de Pilbara, Australia Occidental

Fifteen species of groundwater amphipods in the genus Chydaekata have been described from the Pilbara, Western Australia, each restricted to a single bore. Dewatering at a local mine site was halted while a second survey was undertaken. Newly collected samples were identified using the existing key, and allozyme analysis was used to test species boundaries. Allozymic diversity was not associated with single bores, and only two distinct genetic groups (one of which was very rare), were identified. Based on these results, and the finding that species were found to be more widespread, the Western Australian Environmental Protection Authority recommended that dewatering continue with caution at the site. This study provides an example of the problems associated with incongruent data sets, and the difficulties inherent in working with rare species, namely, interpreting the results of studies based on small samples or incomplete collections.Se han descrito quince especies de anfípodos de aguas subterráneas del género Chydaekata que habitan en la región de Pilbara, Australia Occidental, restringiéndose cada una de ellas a una única perforación. Mientras se elaboraba un segundo estudio, se interrumpió el desagüe que se estaba llevando a cabo en un emplazamiento minero local. Las nuevas muestras recolectadas se identificaron utilizando la clave existente, mientras que para verificar los límites de la especie se recurrió a un análisis alozimático. La diversidad alozimática no se asoció con perforaciones únicas y sólo se identificaron dos grupos genéticos bien diferenciados (uno de los cuales era muy poco común). Basándose en estos resultados y en el hallazgo de que la especie estaba más extendida, el Organismo de Protección Medioambiental de Australia Occidental recomendó que se actuara con cautela al proceder con el desagüe. El presente estudio brinda un ejemplo de los problemas asociados con conjuntos de datos incongruentes, así como las dificultades que conlleva trabajar con especies poco comunes, especialmente en lo que respecta a la interpretación de los resultados de estudios basados en pequeñas muestras o recolecciones incompletas

The value of habitats of conservation importance to climate change mitigation in the UK

The input of PS contributes to the following UKRI-funded projects: DEVIL (NE/M021327/1) and Soils-R-GRREAT (NE/P019455/1). The contributions of RHF, GMB, AH and RBB were funded by RSPB. Thanks to Olly Watts and Phil Grice and three anonymous reviewers for comments on earlier versions of this paper, their comments immeasurably improved it. Thanks also to Ruth Davies, Mel Coath, Vicki Swales, Arfon Williams, Tom Lancaster, Andrew Midgely, Phillip Carson, Jonathan Cryer, Adam Barnett, Paul Morling, Pat Thompson, Beatriz Luraschi, Kate Jennings and Jonathon Bell who helped frame the question addressed here and shape the ‘storymap’ based on this work, available at https://arcg.is/098uiD.Peer reviewedPostprin

On the distribution of career longevity and the evolution of home run prowess in professional baseball

Statistical analysis is a major aspect of baseball, from player averages to historical benchmarks and records. Much of baseball fanfare is based around players exceeding the norm, some in a single game and others over a long career. Career statistics serve as a metric for classifying players and establishing their historical legacy. However, the concept of records and benchmarks assumes that the level of competition in baseball is stationary in time. Here we show that power-law probability density functions, a hallmark of many complex systems that are driven by competition, govern career longevity in baseball. We also find similar power laws in the density functions of all major performance metrics for pitchers and batters. The use of performance-enhancing drugs has a dark history, emerging as a problem for both amateur and professional sports. We find statistical evidence consistent with performance-enhancing drugs in the analysis of home runs hit by players in the last 25 years. This is corroborated by the findings of the Mitchell Report [1], a two-year investigation into the use of illegal steroids in major league baseball, which recently revealed that over 5 percent of major league baseball players tested positive for performance-enhancing drugs in an anonymous 2003 survey.Comment: 5 pages, 5 figures, 2-column revtex4 format. Revision has change of title, a figure added, and minor changes in response to referee comment

Hyperuniversality of Fully Anisotropic Three-Dimensional Ising Model

For the fully anisotropic simple-cubic Ising lattice, the critical finite-size scaling amplitudes of both the spin-spin and energy-energy inverse correlation lengths and the singular part of the reduced free-energy density are calculated by the transfer-matrix method and a finite-size scaling for cyclic L x L x oo clusters with L=3 and 4. Analysis of the data obtained shows that the ratios and the directional geometric means of above amplitudes are universal.Comment: RevTeX 3.0, 24 pages, 2 figures upon request, accepted for publication in Phys. Rev.

Relational Space: Creating a Context for Innovation in Collaborative Consortia

Corporations are collaborating to meet complex global challenges heretofore considered beyond the mandate of business leaders. These multi organizational consortia are not philanthropic efforts but operate within market parameters with limited input from Non Governmental Organizations. In order to examine some dynamics of successful collaborative processes, we pursue an in-depth multi-method case study of “The Sustainability Consortium,” which has convened numerous Fortune 50 senior managers since 1999. We uncover the primacy of “relational space” – a rich context of trust and inquiry – within which participants create innovative projects for doing business in a sustainable way. Our analysis uncovers the dynamics among relational space and the action projects that ensue. We also account for the stakeholder influences and governance that form the architecture of collaboration. We develop a process model and propositions for further research