How does tillage intensity affect soil organic carbon? A systematic review protocol

Background Soils contain the greatest terrestrial carbon (C) pool on the planet. Since approximately 12% of soil C is held in cultivated soils, management of these agricultural areas has a huge potential to affect global carbon cycling; acting sometimes as a sink but also as a source. Tillage is one of the most important agricultural practices for soil management and has been traditionally undertaken to mechanically prepare soils for seeding and minimize effects of weeds. It has been associated with many negative impacts on soil quality, most notably a reduction in soil organic carbon (SOC), although still a matter of considerable debate, depending on factors such as depth of measurement, soil type, and tillage method. No tillage or reduced intensity tillage are frequently proposed mitigation measures for preservation of SOC and improvement of soil quality, for example for reducing erosion. Whilst several reviews have demonstrated benefits to C conservation of no till agriculture over intensive tillage, the general picture for reduced tillage intensity is unclear. This systematic review proposes to synthesise an extensive body of evidence, previously identified through a systematic map. Methods This systematic review is based on studies concerning tillage collated in a recently completed systematic map on the impact of agricultural management on SOC restricted to the warm temperate climate zone (i.e. boreo-temperate). These 311 studies were identified and selected systematically according to CEE guidelines. An update of the original search will be undertaken to identify newly published academic and grey literature in the time since the original search was performed in September 2013. Studies will be critically appraised for their internal and external validity, followed by full data extraction (meta-data describing study settings and quantitative study results). Where possible, studies will be included in meta-analyses examining the effect of tillage reduction (‘moderate' (i.e. shallow) and no tillage relative to ‘intensive' tillage methods such as mouldboard ploughing, where soil is turned over throughout the soil profile). The implications of the findings will be discussed in terms of policy, practice and research along with a discussion of the nature of the evidence base

Which agricultural management interventions are most influential on soil organic carbon (using time series data)?

Background Loss of soil organic carbon (SOC) from agricultural land is identified as one of the major threats to soils, as it influences both fertility and the production of ecosystem services from agriculture. Losses of SOC across regions are often determined by monitoring in different land use systems. Results from agricultural field experiments can reveal increasing SOC stocks after implementation of specific management practices compared to a control, though in time series experiments the relative rate of change is often negative and implying an overall loss. Long-term agricultural field experiments are indispensable for quantifying absolute changes in SOC stocks under different management regimes. Since SOC responses are seldom linear over time, time series data from these experiments are particularly valuable. Methods This systematic review is based on studies reporting time series data collated in a recently completed systematic map on the topic restricted to the warm temperate climate zone and the snow climate zone. These 53 studies were identified and selected systematically according to CEE guidelines. An update of the original search for studies will be repeated using Web of Science and Google Scholar to include newly published academic and grey literature in the time since the original search was performed in September 2013. Studies will be subject to critical appraisal of the internal and external validity, followed by full data extraction (meta-data describing study settings and quantitative study results). Where possible, studies will be included in a quantitative synthesis using time series meta-analytical approaches. The implications of the meta-analytical findings will be discussed in terms of policy, practice and research along with a discussion of the nature of the evidence base

Soil networks become more connected and take up more carbon as nature restoration progresses

Soil organisms have an important role in aboveground community dynamics and ecosystem functioning in terrestrial ecosystems. However, most studies have considered soil biota as a black box or focussed on specific groups, whereas little is known about entire soil networks. Here we show that during the course of nature restoration on abandoned arable land a compositional shift in soil biota, preceded by tightening of the belowground networks, corresponds with enhanced efficiency of carbon uptake. In mid- and long-term abandoned field soil, carbon uptake by fungi increases without an increase in fungal biomass or shift in bacterial-to-fungal ratio. The implication of our findings is that during nature restoration the efficiency of nutrient cycling and carbon uptake can increase by a shift in fungal composition and/or fungal activity. Therefore, we propose that relationships between soil food web structure and carbon cycling in soils need to be reconsidered

Life-history traits of soil collembolans in relation to food quality

Preference studies of many different collembolan species have categorised collembolans being selective in their food choice. To clarify whether collembolan food selectivity is related to fitness parameters, three species, Folsomia fimetaria, Protaphorura armata and Heteromurus nitidus, were fed three fungal species, Alternaria infectoria, Mucor hiemalis and Penicillium hordei, representing fungi of high, medium and low preference. The fungal diets were grown on soil and collembolan growth, survival and fecundity were measured. The fungus A. infectoria supported growth, survival and reproduction best in all three species of collembolans, while the fungus P. hordei was of low food quality. M. hiemalis was of medium quality and F. fimetaria was the only collembolan reproducing on M. hiemalis. F. fimetaria favoured reproduction over growth when confined to M. hiemalis. When P. armata was fed M. hiemalis it reached a size where reproduction normally starts, but no young were produced. This suggests that M. hiemalis lacks nutrients necessary for reproduction. H. nitidus did not perform well on any of the fungi offered, which were generally of low food quality for this species. In this study, where the fungal growth substrate is soil, there is a clear relationship between collembolan fitness and their food choice in contrast to some other studies where substrates optimised for fungal growth had been used. We show that specific fungal species are important for resource allocation to growth or reproduction and closely connected with food choice. Further, we argue that natural fungal growth substrates, such as soil, should be used in experiments of this kind

Selective foraging of fungi by collembolans in soil

Soils contain highly diverse communities of microorganisms and invertebrates. The trophic interactions between these species are largely unknown. Collembolans form an abundant part of the invertebrate community in soils. A prevailing view is that soil collembolans are generalist feeders on fungi, lichens, fragmented litter and bacteria. However, in laboratory food choice experiments, it has been shown that collembolans preferentially select certain taxa of fungi. To examine this apparent contradiction, we developed a molecular technique based on the analysis of 18S ribosomal DNA (rDNA) sequences to explore the diversity of fungi in soils and in the guts of collembolans. We report that the diversity of fungi found in the natural soil was 33 times higher than that in the guts of the collembolan Protaphorura armata. The data support the view that collembolan species can be highly selective when foraging on fungi in soils

How do selected crop rotations affect soil organic carbon in boreo-temperate systems? A systematic review protocol

Abstract Background Soils are important global carbon pools that are under threat from intensive land use through a variety of agricultural practices. Sustainable management of agricultural soils may have the potential to mitigate climate change through increased carbon sequestration and increase their fertility. Among management practices to increase carbon sequestration, crop rotation designs have often been tested on yield effects in long-term agricultural experiments. However, in these studies, soil organic carbon (SOC) was monitored but not always the key objective. Thus, here we provide a method for a systematic review to test the effects of common crop rotations on SOC sequestration to provide evidence on the most sustainable management regimes that can promote SOC storage. Methods This systematic review incorporates studies concerning selected crop rotations (rotations-vs-monocultures, legumes-vs-no legumes, and perennials-vs-annuals) collated in a recently completed systematic map on the effect of agricultural management on SOC, restricted to boreo-temperate systems (i.e., the warm temperate climate zone). Some 208 studies relevant for this systematic review were identified in the systematic map. An update of the original search (September 2013) will be undertaken to identify newly published academic and grey literature. Studies will be critically appraised for their internal and external validity, followed by full data extraction (meta-data describing study settings and quantitative study results). Where possible, studies will be included in meta-analyses examining the effects of the different rotational practices. Implications of the findings will be discussed in terms of policy, practice and research, and the nature of the evidence base

Organic management and cover crop species steer soil microbial community structure and functionality along with soil organic matter properties

It is well recognized that organic soil management stimulates bacterial biomass and activity and that including cover crops in the rotation increases soil organic matter (SOM). Yet, to date the relative impact of different cover crop species and organic vs. non-organic soil management on soil bacteria and fungi and on SOM quantity and quality remains to be tested. We used a long-term (10 years) full-factorial field experiment to test the combined effects of organic vs. conventional soil management with different cover crop species (oat or rye) and the legacy effects of seven soil health treatments (SHTs: treatments with compost, chitin, marigold, grass–clover, biofumigation or anaerobic soil disinfestation (ASD), and fallow as control) on microbial community biomass, structure and catabolic activity and on SOM quantity and quality (dissolved organic carbon (DOC), aromaticity and water repellency). Microbial community traits were assessed using PLFA/NLFA analyses and multi-substrate induced respiration. We found that organic soil management enhanced total microbial biomass by increasing bacterial, saprotrophic and arbuscular mycorrhizal fungal biomass; and increased total microbial catabolic activity, associated with maintaining high microbial efficiency (low qCO2). Effects of organic management were amplified by oat as cover crop, which enhanced the abundance of saprotrophic fungi resulting in a higher fungal:bacterial ratio. Total SOM concentration was similar among treatments, however the most easily accessible fraction, i.e. DOC, was higher in organic compared to conventional soils. Also, the aromaticity of the DOC was lower in organic than in conventional systems, which was associated with lower water repellency. There was a legacy effect of SHTs on fungal:bacterial ratio in that chitin and marigold showed higher fungal:bacterial ratio compared to compost, biofumigation and ASD even 6 years after the last application. We conclude that organic soil management enhances the abundance of all microbial groups and their total catabolic activity, associated with a higher concentration and lower aromaticity of dissolved organic matter. These effects can be enlarged by the growth of specific cover crops and the application of certain soil health treatments

Effects of simulated drought on biological soil quality, microbial diversity and yields under long-term conventional and organic agriculture

Drought and agricultural management influence soil microorganisms with unknown consequences for the functioning of agroecosystems. We simulated drought periods in organic (biodynamic) and conventional wheat fields and monitored effects on soil water content, microorganisms and crops. Above the wilting point, water content and microbial respiration were higher under biodynamic than conventional farming. Highest bacterial and fungal abundances were found in biodynamically managed soils, and distinct microbial communities characterised the farming systems. Most biological soil quality parameters and crop yields were only marginally affected by the experimental drought, except for arbuscular mycorrhizal fungi (AMF), which increased in abundance under the experimental drought in both farming systems. AMF were further strongly promoted by biodynamic farming resulting in almost three times higher AMF abundance under experimental drought in the biodynamic compared with the conventional farming system. Our data suggest an improved water storage capacity under biodynamic farming and confirms positive effects of biodynamic farming on biological soil quality. The interactive effects of the farming system and drought may further be investigated under more substantial droughts. Given the importance of AMF for the plant's water supply, more in-depth studies on AMF may help to clarify their role for yields under conditions predicted by future climate scenarios

What are the effects of agricultural management on soil organic carbon in boreo‑temperate systems?

Background: Soils contain the largest stock of organic carbon (C) in terrestrial ecosystems and changes in soil C stocks may significantly affect atmospheric CO2. A significant part of soil C is present in cultivated soils that occupy about 35 % of the global land surface. Agricultural intensification has led to practices that may decrease soil organic carbon (SOC), and agricultural management has the potential to be a powerful tool for climate change mitigation and increased soil fertility through SOC sequestration. Here, we systematically map evidence relating to the impacts of agricultural management on SOC in arable systems of the warm temperate and snow climate zones (subset of temperate and continental climates: Köppen–Geiger Classification). Methods: Seventeen academic citation databases, 3 search engines and 25 organisational websites were searched for literature (academic and grey) using search strings translated into a range of languages relevant to the included geographical scope of the topic. Stakeholders were also contacted with requests for evidence. Bibliographic checking of 127 relevant reviews was undertaken to check for missing articles. Screening for relevance against predefined inclusion criteria was undertaken at title, abstract and full text levels according to a published protocol. All relevant studies were coded in a meta-database describing the citation, study settings, methods and quantitative data available (without extraction of the study findings). A basic critical appraisal of included studies was also performed. A geographical information system (GIS) presenting the map database on a physical, online map was also produced. Results: A total of 735 studies from 553 articles was included in the systematic map database. Studies investigated one or more of five broad categories of interventions: amendments (286 studies), crop rotations (238), fertilisers (307), tillage (306), and multiple interventions (55). Studies were identified from across the includible climate zones, with the notable underrepresentation from Russia. The majority of studies employed only point sampling of SOC, low levels of true spatial replication and moderate study periods (i.e. 10–20 years). Missing key methodological information was found in 28 % of studies. Conclusions: Long-term study sites identified in this map provide a useful addition to existing databases of longterm experiments (LTEs). The identification of knowledge gaps, such as studies from Russia, also identify a need for improved cataloguing or reporting of existing and on-going research. This systematic map database represents a useful resource for decision-makers wishing to identify knowledge gaps warranting further primary research, knowledge gluts warranting further secondary research, and deficiencies and best practice in research methodology. In addition to the systematic map database, we have also produced two further resources: (1) a database of LTE sites investigating agricultural management and SOC, and (2) a database of reviews and meta-analyses. To our knowledge, this is the first systematic review or map that utilises a GIS for presentation of an evidence base, which we believe substantially increases the utility of the map outputs.JRC.D.6-Knowledge for Sustainable Development and Food Securit