55 research outputs found

    Optimal General Matchings

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    Given a graph G=(V,E)G=(V,E) and for each vertex v∈Vv \in V a subset B(v)B(v) of the set {0,1,…,dG(v)}\{0,1,\ldots, d_G(v)\}, where dG(v)d_G(v) denotes the degree of vertex vv in the graph GG, a BB-factor of GG is any set F⊆EF \subseteq E such that dF(v)∈B(v)d_F(v) \in B(v) for each vertex vv, where dF(v)d_F(v) denotes the number of edges of FF incident to vv. The general factor problem asks the existence of a BB-factor in a given graph. A set B(v)B(v) is said to have a {\em gap of length} pp if there exists a natural number k∈B(v)k \in B(v) such that k+1,…,k+p∉B(v)k+1, \ldots, k+p \notin B(v) and k+p+1∈B(v)k+p+1 \in B(v). Without any restrictions the general factor problem is NP-complete. However, if no set B(v)B(v) contains a gap of length greater than 11, then the problem can be solved in polynomial time and Cornuejols \cite{Cor} presented an algorithm for finding a BB-factor, if it exists. In this paper we consider a weighted version of the general factor problem, in which each edge has a nonnegative weight and we are interested in finding a BB-factor of maximum (or minimum) weight. In particular, this version comprises the minimum/maximum cardinality variant of the general factor problem, where we want to find a BB-factor having a minimum/maximum number of edges. We present an algorithm for the maximum/minimum weight BB-factor for the case when no set B(v)B(v) contains a gap of length greater than 11. This also yields the first polynomial time algorithm for the maximum/minimum cardinality BB-factor for this case

    Does Kin Recognition and Sib-Mating Avoidance Limit the Risk of Genetic Incompatibility in a Parasitic Wasp?

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    Background: When some combinations of maternal and paternal alleles have a detrimental effect on offspring fitness, females should be able to choose mates on the basis of their genetic compatibility. In numerous Hymenoptera, the sex of an individual depends of the allelic combination at a specific locus (single-locus Complementary Sex Determination), and in most of these species individuals that are homozygous at this sexual locus develop into diploid males with zero fitness. Methods and Findings: In this paper, we tested the hypothesis of genetic incompatibility avoidance by investigating sibmating avoidance in the solitary wasp parasitoid, Venturia canescens. In the context of mate choice we show, for the first time in a non-social hymenopteran species, that females can avoid mating with their brothers through kin recognition. In ‘‘no-choice’ ’ tests, the probability a female will mate with an unrelated male is twice as high as the chance of her mating with her brothers. In contrast, in choice tests in small test arenas, no kin discrimination effect was observed. Further experiments with male extracts demonstrate that chemical cues emanating from related males influence the acceptance rate of unrelated males. Conclusions: Our results are compatible with the genetic incompatibility hypothesis. They suggest that the female wasps recognize sibs on the basis of a chemical signature carried or emitted by males possibly using a ‘‘self-referent phenotyp

    Wood Utilization Is Dependent on Catalase Activities in the Filamentous Fungus Podospora anserina

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    Catalases are enzymes that play critical roles in protecting cells against the toxic effects of hydrogen peroxide. They are implicated in various physiological and pathological conditions but some of their functions remain unclear. In order to decipher the role(s) of catalases during the life cycle of Podospora anserina, we analyzed the role of the four monofunctional catalases and one bifunctional catalase-peroxidase genes present in its genome. The five genes were deleted and the phenotypes of each single and all multiple mutants were investigated. Intriguingly, although the genes are differently expressed during the life cycle, catalase activity is dispensable during both vegetative growth and sexual reproduction in laboratory conditions. Catalases are also not essential for cellulose or fatty acid assimilation. In contrast, they are strictly required for efficient utilization of more complex biomass like wood shavings by allowing growth in the presence of lignin. The secreted CATB and cytosolic CAT2 are the major catalases implicated in peroxide resistance, while CAT2 is the major player during complex biomass assimilation. Our results suggest that P. anserina produces external H2O2 to assimilate complex biomass and that catalases are necessary to protect the cells during this process. In addition, the phenotypes of strains lacking only one catalase gene suggest that a decrease of catalase activity improves the capacity of the fungus to degrade complex biomass

    Comparative transcriptome analysis reveals different strategies for degradation of steam-exploded sugarcane bagasse by Aspergillus niger and Trichoderma reesei

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    Proper distance from ourselves: the potential for estrangement in the mediapolis

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    This article discusses how, and with what consequences, the news in today’s increasingly global and porous environment tells us about ourselves, showing us images that are often uncomfortable, strange and disturbing. In particular, it examines how, in times of conflict, in narrating and imaging ‘us’ as a nation, the news media can contribute to an ethical project of estrangement — achieving distance from ourselves, seeing ourselves as others, as a way to address injustice and enhance democratic public spheres. The analysis is based on a comparison of coverage of the 2005 riots in France and the reporting of the 2008/9 Gaza war in Israel. The discussion explores ways in which the aesthetics of news can be mobilized for estrangement, what incentives journalism might have for promoting an ethics of estrangement, and the opportunities and dangers this project entails. This exploration shows how Silverstone’s concept of proper distance may play out in different situations of news coverage of conflict, especially when there is a tension between national and international reporting
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