Outils pour chercher de l'information sur R et se former

National audienceDans cette proposition de communications, nous nous proposons de faire le tour de ressources disponibles en ligne pour rechercher des informations sur R, son installation, son utilisation ainsi que de celles qui permettent de se former. Notre ambition n'est pas de fournir une liste exhaustive de ces ressources mais, devant le foisonnement et le développement de sites web, blogs et ressources diverses concernant le logiciel, de faire un descriptif organisé de celles que nous avons utilisées ou appréciées

Graver la « France monumentale » au Grand Siècle

Publication issue d’une thèse de doctorat soutenue en 2010, le livre de Kristina Deutsch, aujourd’hui chercheur à l’Institut für Kunstgeschichte de l’université de Münster, constitue la première monographie contemporaine sur le graveur et architecte français Jean Marot (vers 1619-1679), auteur de plus de mille gravures. Depuis le catalogue raisonné du collectionneur André Mauban publié en 1944, aucune étude scientifique d’envergure, proposant analyses et mises en perspective, ne reconsidérait..

Inactivation of pecS restores the virulence of mutants devoid of osmoregulated periplasmic glucans in the phytopathogenic bacterium Dickeya dadantii

International audienceDickeya dadantii is a phytopathogenic enterobacterium that causes soft rot disease in a wide range of plant species. Maceration, an apparent symptom of the disease, is the result of the synthesis and secretion of a set of plant cell wall-degrading enzymes (PCWDEs), but many additional factors are required for full virulence. Among these, osmoregulated periplasmic glucans (OPGs) and the PecS transcriptional regulator are essential virulence factors. Several cellular functions are controlled by both OPGs and PecS. Strains devoid of OPGs display a pleiotropic phenotype including total loss of virulence, loss of motility and severe reduction in the synthesis of PCWDEs. PecS is one of the major regulators of virulence in D. dadantii, acting mainly as a repressor of various cellular functions including virulence, motility and synthesis of PCWDEs. The present study shows that inactivation of the pecS gene restored virulence in a D. dadantii strain devoid of OPGs, indicating that PecS cannot be de-repressed in strains devoid of OPGs

Effect of MTU length on child-adult difference in neuromuscular fatigue

Purpose The purpose of this study was to compare the development and etiology of neuromuscular fatigue of the knee extensor muscles (KE) at different muscle-tendon unit (MTU) lengths during repeated maximal voluntary isometric contractions (MVIC) between boys and men.Methods Twenty-two pre-pubertal boys (9-11 years) and 22 men (18-30 years) performed three KE fatigue protocols at short (SHORT), optimal (OPT) and long (LONG) MTU lengths, consisting of repeating 5-s MVIC interspersed with 5-s passive recovery periods until torque reached 60% of the initial MVIC torque. The etiology of neuromuscular fatigue was identified using non-invasive methods such as surface electromyography, near-infrared spectroscopy, magnetic nerve stimulation and twitch interpolation technique.Results The number of repetitions was significantly lower in men at OPT (14.8$\pm$3.2) and LONG (15.8$\pm$5.8) than boys (39.7$\pm$18.4 and 29.5 $\pm$10.2, respectively; p<0.001), while no difference was found at SHORT between both age groups (boys: 33.7$\pm$15.4, men: 40.9$\pm$14.2). At OPT and LONG boys showed a lower reduction in the single potentiated twitch (Qtwpot) and a greater decrease in the voluntary activation level (VA) than men. At SHORT, both populations displayed a moderate Qtwpot decrement and a significant VA reduction (p<0.001). The differences in maximal torque between boys and men were almost twice greater at OPT (223.9 N.m) than at SHORT (123.3 N.m) and LONG (136.5 N.m).Conclusion The differences in neuromuscular fatigue between children and adults are dependent on MTU length. Differences in maximal torque could underpin differences in neuromuscular fatigue between children and adults at OPT and SHORT. However, at LONG these differences do not seem to be explained by differences in maximal torque. The origins of this specific effect of MTU length remain to be determined

The EnvZ-OmpR Two-Component Signaling System Is Inactivated in a Mutant Devoid of Osmoregulated Periplasmic Glucans in Dickeya dadantii

Osmoregulated periplasmic glucans (OPGs) are general constituents of alpha-, beta-, and gamma-Proteobacteria. This polymer of glucose is required for full virulence of many pathogens including Dickeya dadantii (D. dadantii). The phytopathogenic enterobacterium D. dadantii causes soft-rot disease in a wide range of plants. An OPG-defective mutant is impaired in environment sensing. We previously demonstrated that (i) fluctuation of OPG concentration controlled the activation level of the RcsCDB system, and (ii) RcsCDB along with EnvZ/OmpR controlled the mechanism of OPG succinylation. These previous data lead us to explore whether OPGs are required for other two-component systems. In this study, we demonstrate that inactivation of the EnvZ/OmpR system in an OPG-defective mutant restores full synthesis of pectinase but only partial virulence. Unlike for the RcsCDB system, the EnvZ-OmpR system is not controlled by OPG concentration but requires OPGs for proper activation

Concentration of osmoregulated periplasmic glucans (OPGs) modulates the activation level of the RcsCD RcsB phosphorelay in the phytopathogen bacteria Dickeya dadantii

International audienceOsmoregulated periplasmic glucans (OPGs) are general constituents of many Proteobacteria. Synthesis of these oligosaccharides is repressed by increased osmolarity of the medium. OPGs are important factors required for full virulence in many zoo-or phytopathogens including Dickeya dadantii. The phytopathogen enterobacterium D. dadantii causes soft-rot disease on a wide range of plant species. The total loss of virulence of opg-negative strains of D. dadantii is linked to the constitutive activation of the RcsCD RcsB phosphorelay highlighting relationship between this phosphorelay and OPGs. Here we show that OPGs control the RcsCD RcsB activation in a concentration-dependent manner, are required for proper activation of this phosphorelay by medium osmolarity, and a high concentration of OPGs in planta is maintained to achieve the low level of activation of the RcsCD RcsB phosphorelay required for full virulence in D. dadantii

Développement d’un insecte artificiel. Nanodrone dédié à la surveillance intra-bâtiment

Dans l’optique de réaliser de la surveillance intra-bâtiment avec un système autonome, mobile, très discret, des recherches sont en cours pour développer des nanodrones. Elles se concentrent sur la compréhension et l’imitation du vol battu des insectes et sur les aspects de la miniaturisation. Cet article décrit la conception et la réalisation d’un insecte artificiel à ailes résonantes à l’aide des technologies de microfabrication de la microélectronique. Un actionneur électromagnétique induit un mouvement de flexion/torsion des ailes correspondant à une cinématique similaire à celle des insectes. L’estimation des phénomènes aéroélastiques en grands déplacements est réalisée à l’aide d’un modèle basé sur les éléments finis et une formulation analytique de l’aérodynamique. Une validation expérimentale est ensuite proposée

Spitzer spectral line mapping of protostellar outflows: I. Basic data and outflow energetics

We report the results of spectroscopic mapping observations carried out toward protostellar outflows in the BHR71, L1157, L1448, NGC 2071, and VLA 1623 molecular regions using the Infrared Spectrograph (IRS) of the Spitzer Space Telescope. These observations, covering the 5.2 - 37 micron spectral region, provide detailed maps of the 8 lowest pure rotational lines of molecular hydrogen and of the [SI] 25.25 micron and [FeII] 26.0 micron fine structure lines. The molecular hydrogen lines, believed to account for a large fraction of the radiative cooling from warm molecular gas that has been heated by a non-dissociative shock, allow the energetics of the outflows to be elucidated. Within the regions mapped towards these 5 outflow sources, total H2 luminosities ranging from 0.02 to 0.75 L(solar) were inferred for the sum of the 8 lowest pure rotational transitions. By contrast, the much weaker [FeII] 26.0 micron fine structure transition traces faster, dissociative shocks; here, only a small fraction of the fast shock luminosity emerges as line radiation that can be detected with Spitzer/IRS.Comment: 38 pages including 17 figures. Accepted for publication in Ap

Children Exhibit a More Comparable Neuromuscular Fatigue Profile to Endurance Athletes Than Untrained Adults

The present study compared neuromuscular fatigue profiles between children, untrained adults and adult endurance athletes during repeated maximal muscle contractions. Eighteen prepubertal boys, 19 untrained men and 13 endurance male athletes performed 5-s maximal voluntary isometric knee extensor contractions (MVICs) interspersed with 5-s recovery until MVIC reached 60% of its initial value. Single and doublet magnetic stimulations were delivered to the femoral nerve to quantify the time course of potentiated twitch amplitude (Ttw,pot), high-frequency torque (T100Hz) and the low-to-high frequency torque ratio (T10Hz/T100Hz), i.e., indicators of peripheral fatigue. M-wave-normalized EMG amplitudes (EMG/M) and the maximal voluntary activation level (VA) were calculated to quantify central fatigue. Adults (15.9 ± 3.9 repetitions) performed fewer MVICs than children (40.4 ± 19.7) and endurance athletes (51.7 ± 19.6), however, no difference was observed between children and athletes (P = 0.13). Ttw,pot (∼52%, P &lt; 0.001), T100Hz (∼39%, P &lt; 0.001) and T10Hz/T100Hz (∼23%, P &lt; 0.001) decreased only in adults. Similar decrements in vastus medialis and vastus lateralis EMG/M were observed in children and endurance athletes (range: 40–50%), and these were greater than in adults (∼15%). Whilst VA decreased more in children (-38.4 ± 22.5%, P &lt; 0.001) than endurance athletes (-20.3 ± 10.1%, P &lt; 0.001), it did not change in adults. Thus, children fatigued more slowly than adults and as much as endurance athletes. They developed less peripheral and more central fatigue than adults and, although central fatigue appeared somewhat higher in children than endurance athletes, both children and endurance athletes experienced greater decrements than adults. Therefore, children exhibit a more comparable neuromuscular fatigue profile to endurance athletes than adults

Spitzer mapping of molecular hydrogen pure rotational lines in NGC 1333: A detailed study of feedback in star formation

We present mid-infrared spectral maps of the NGC 1333 star forming region, obtained with the the Infrared Spectrometer on board the Spitzer Space Telescope. Eight pure H2 rotational lines, from S (0) to S (7), are detected and mapped. The H2 emission appears to be associated with the warm gas shocked by the multiple outflows present in the region. A comparison between the observed intensities and the predictions of detailed shock models indicates that the emission arises in both slow (12 - 24 km/s) and fast (36 - 53 km/s) C-type shocks with an initial ortho-to-para ratio of ~ 1. The present H2 ortho-to-para ratio exhibits a large degree of spatial variations. In the post-shocked gas, it is usually about 2, i.e. close to the equilibrium value (~ 3). However, around at least two outflows, we observe a region with a much lower (~ 0.5) ortho-to-para ratio. This region probably corresponds to gas which has been heated-up recently by the passage of a shock front, but whose ortho-to-para has not reached equilibrium yet. This, together with the low initial ortho-to-para ratio needed to reproduce the observed emission, provide strong evidence that H2 is mostly in para form in cold molecular clouds. The H2 lines are found to contribute to 25 - 50% of the total outflow luminosity, and thus can be used to ascertain the importance of star formation feedback on the natal cloud. From these lines, we determine the outflow mass loss rate and, indirectly, the stellar infall rate, the outflow momentum and the kinetic energy injected into the cloud over the embedded phase. The latter is found to exceed the binding energy of individual cores, suggesting that outflows could be the main mechanism for core disruption.Comment: Accepted for publication in the Astrophysical Journa