An image system for CINDI

Content Based Image Retrieval (CBIR) becomes possible and necessary as computer graphics, machine learning, knowledgebase and database technologies mature. SHMM aims to be a web oriented image library with an automatic image addition and classification mechanism to support sample image based similarity search, and semantic description search as well as allowing the registered users to add image to the database. As a sample CBIR system, SHMMhas its feature extraction layer, which supports colour and texture feature extraction that generates a 16-dimensional vector value. Based on this vector, a 16-dimensional SR tree is constructed. Using the nearest neighbor search technology on the SR tree, similarity search is supported. With backend database support, semantic description search, which is based on the keyword of the semantic meaning of image, is also implemented in SHMM. When a new image is added to the system, SHMM will automatically scan its feature, suggest the semantic description based on the similarity search result in the library, and wait for the user's response. Image contributor can accept the system's suggestion or inform system administrator via email to create new semantic description category in the system. (Abstract shortened by UMI.

The cientificWorldJOURNAL Research Article Exergetic Assessment for Resources Input and Environmental Emissions by Chinese Industry during 1997-2006

This paper presents an overview of the resources use and environmental impact of the Chinese industry during [1997][1998][1999][2000][2001][2002][2003][2004][2005][2006]. For the purpose of this analysis the thermodynamic concept of exergy has been employed both to quantify and aggregate the resources input and the environmental emissions arising from the sector. The resources input and environmental emissions show an increasing trend in this period. Compared with 47568.7 PJ in 1997, resources input in 2006 increased by 75.4% and reached 83437.9 PJ, of which 82.5% came from nonrenewable resources, mainly from coal and other energy minerals. Furthermore, the total exergy of environmental emissions was estimated to be 3499.3 PJ in 2006, 1.7 times of that in 1997, of which 93.4% was from GHG emissions and only 6.6% from "three wastes" emissions. A rapid increment of the nonrenewable resources input and GHG emissions over 2002-2006 can be found, owing to the excessive expansion of resource-and energy-intensive subsectors. Exergy intensities in terms of resource input intensity and environmental emission intensity time-series are also calculated, and the trends are influenced by the macroeconomic situation evidently, particularly by the investment-derived economic development in recent years. Corresponding policy implications to guide a more sustainable industry system are addressed

Genomic amplification patterns of human telomerase RNA gene and C-MYC in liquid-based cytological specimens used for the detection of high-grade cervical intraepithelial neoplasia

<p>Abstract</p> <p>Background</p> <p>The amplification of oncogenes initiated by high-risk human papillomavirus (HPV) infection is an early event in cervical carcinogenesis and can be used for cervical lesion diagnosis. We measured the genomic amplification rates and the patterns of human telomerase RNA gene (TERC) and C-MYC in the liquid-based cytological specimens to evaluate the diagnostic characteristics for the detection of high-grade cervical lesions.</p> <p>Methods</p> <p>Two hundred and forty-three residual cytological specimens were obtained from outpatients aged 25 to 64 years at Qilu Hospital, Shandong University. The specimens were evaluated by fluorescence in situ hybridization (FISH) using chromosome probes to TERC (3q26) and C-MYC (8q24). All of the patients underwent colposcopic examination and histological evaluation. A Chi-square test was used for categorical data analysis.</p> <p>Results</p> <p>In the normal, cervical intraepithelial neoplasia grade 1 (CIN1), grade 2 (CIN2), grade 3 (CIN3) and squamous cervical cancer (SCC) cases, the TERC positive rates were 9.2%, 17.2%, 76.2%, 100.0% and 100.0%, respectively; the C-MYC positive rates were 20.7%, 31.0%, 71.4%, 81.8% and 100.0%, respectively. The TERC and C-MYC positive rates were higher in the CIN2+ (CIN2, CIN3 and SCC) cases than in the normal and CIN1 cases (<it>p </it>< 0.01). Compared with cytological analysis, the TERC test showed higher sensitivity (90.0% vs. 84.0%) and higher specificity (89.6% vs. 64.3%). The C-MYC test showed lower sensitivity (80.0% vs. 84.0%) and higher specificity (77.7% vs. 64.3%). Using a cut-off value of 5% or more aberrant cells, the TERC test showed the highest combination of sensitivity and specificity. The CIN2+ group showed more high-level TERC gene copy number (GCN) cells than did the normal/CIN1 group (<it>p </it>< 0.05). For C-MYC, no significant difference between the two histological categories was detected (<it>p </it>> 0.05).</p> <p>Conclusions</p> <p>The TERC test is highly sensitive and is therefore suitable for cervical cancer screening. The C-MYC test is not suitable for cancer screening because of its lower sensitivity. The amplification patterns of TERC become more diverse and complex as the severity of cervical diseases increases, whereas for C-MYC, the amplification patterns are similar between the normal/CIN1 and CIN2+ groups.</p> <p>Virtual slides</p> <p>The virtual slide(s) for this article can be found here: <url>http://www.diagnosticpathology.diagnomx.eu/vs/1308004512669913</url>.</p

The existence of Th22, pure Th17 and Th1 cells in CIN and Cervical Cancer along with their frequency variation in different stages of cervical cancer

BACKGROUND: Recently, it is found that T-helper (Th) 22 cells are involved in different types of autoimmune and tumor diseases. But, till now, no study has been carried out to understand the involvement of these cells in cervical cancer (CC). METHODS: Flow cytometry was used to determine the expression of interferon gamma (IFN-gamma), Interleukin-22 (IL-22), IL-17 in the peripheral blood of healthy controls (HC), CIN and cervical cancer patients. From peripheral blood mononuclear cells (PBMCs), mRNA expression levels of Aryl hydrocarbon receptor (AHR), RAR-related orphan receptor C (RORC), TNF-alpha and IL-6 were respectively determined. Using the method of ELISA, plasma concentrations of IL-22, IL-17 and TNF-alpha were examined. RESULTS: Th22 and Th17 cells were elevated in CC and CIN patients. Th1 cells and the plasma concentrations of IL-22 in CC patients were significantly increased compared with HC. In CC patients, an increased prevalence of Th22 cells was associated with lymph node metastases. There was a positive correlation between Th22 and Th17 cells, but an approximately negative correlation between Th22 and Th1 cells in CC patients. The mRNA expression of RORC, TNF-alpha and IL-6 was significantly high in CC patients. CONCLUSIONS: Our results indicate that there is a higher circulatory frequency of Th22, Th17 and Th1 cells in CC which may conjointly participate in the pathogenesis and growth of CC.This item is part of the UA Faculty Publications collection. For more information this item or other items in the UA Campus Repository, contact the University of Arizona Libraries at [email protected]

PAX8: a sensitive and specific marker to identify cancer cells of ovarian origin for patients prior to neoadjuvant chemotherapy

BACKGROUND: Neoadjuvant chemotherapy followed by cytoreduction surgery has been used where an accurate cytologic or pathologic diagnosis is usually required before the initiation of neoadjuvant chemotherapy. However, it is difficult to make definitive diagnosis of presence of cancer cells, particularly gynecologic versus non-gynecologic origin, from those ascites specimens due to the absence of specific biomarkers of gynecologic cancers. In the present study, we evaluated if, in addition to the routine morphologic diagnosis, the biomarker PAX8 could be useful in recognition of ovarian epithelial cancer cells prior to the neoadjuvant chemotherapy. METHODS: Two hundred and two cytology specimens including 120 pretreatment ovarian cancer samples, 60 benign controls, and 22 malignant non-gynecologic cases were studied. All cytology slides were morphologically reviewed in a blinded fashion without knowing corresponding pathology diagnosis, if present. A total of 168 cytology specimens with a cell block were stained with PAX8 and Calretinin. These included patients with potential for ovarian cancer neoadjuvant chemotherapy (n = 96), metastatic cancers (n = 22), and benign controls (n = 50). RESULTS: Among the 96 ascitic samples prior to neoadjuvant chemotherapy, 76 (79%) showing morphologic features consistent with cancers of ovarian primary were all PAX+/Calretinin-. The remaining 20 (21%) cases were positive for adenocarcinoma, but morphologically unable to be further classified. Among the 22 metastatic cancers into the pelvis, one case with PAX8+/Calretinin- represented a renal cell carcinoma and the remaining 21 PAX8-/Calretinin- metastatic cancers were either breast metastasis (n = 4) and the metastasis from gastrointestinal tract (n = 17). Among the 50 benign control pelvic washing cases, 5 PAX8+/Calretinin-cases represented endosalpingiosis (n = 4) and endometriosis (n = 1), 25 PAX8-/Calretinin + cases showed reactive mesothelial cells, and the remaining 20 specimens with PAX8-/Calretinin- phenotype typically contained inflammatory or blood cells without noticeable diagnostic epithelia. CONCLUSIONS: PAX8 identifies all Müllerian derived benign or malignant epithelia. When combining with Calretinin, PAX8 is a sensitive marker to diagnose the carcinomas of ovarian origin, which will be ideal to be used for those patients with a possible advanced ovarian cancer prior to receiving neoadjuvant chemotherapy

Exergetic Assessment for Resources Input and Environmental Emissions by Chinese Industry during 1997–2006

This paper presents an overview of the resources use and environmental impact of the Chinese industry during 1997–2006. For the purpose of this analysis the thermodynamic concept of exergy has been employed both to quantify and aggregate the resources input and the environmental emissions arising from the sector. The resources input and environmental emissions show an increasing trend in this period. Compared with 47568.7 PJ in 1997, resources input in 2006 increased by 75.4% and reached 83437.9 PJ, of which 82.5% came from nonrenewable resources, mainly from coal and other energy minerals. Furthermore, the total exergy of environmental emissions was estimated to be 3499.3 PJ in 2006, 1.7 times of that in 1997, of which 93.4% was from GHG emissions and only 6.6% from “three wastes” emissions. A rapid increment of the nonrenewable resources input and GHG emissions over 2002–2006 can be found, owing to the excessive expansion of resource- and energy-intensive subsectors. Exergy intensities in terms of resource input intensity and environmental emission intensity time-series are also calculated, and the trends are influenced by the macroeconomic situation evidently, particularly by the investment-derived economic development in recent years. Corresponding policy implications to guide a more sustainable industry system are addressed