Metabolic Capability and Phylogenetic Diversity of Mono Lake during a Bloom of the Eukaryotic Phototroph Picocystis sp. Strain ML

Algal blooms in lakes are often associated with anthropogenic eutrophication; however, they can occur without the human introduction of nutrients to a lake. A rare bloom of the alga Picocystis sp. strain ML occurred in the spring of 2016 at Mono Lake, a hyperalkaline lake in California, which was also at the apex of a multiyear-long drought. These conditions presented a unique sampling opportunity to investigate microbiological dynamics and potential metabolic function during an intense natural algal bloom. We conducted a comprehensive molecular analysis along a depth transect near the center of the lake from the surface to a depth of 25 m in June 2016. Across sampled depths, rRNA gene sequencing revealed that Picocystis-associated chloroplasts were found at 40 to 50% relative abundance, greater than values recorded previously. Despite high relative abundances of the photosynthetic oxygenic algal genus Picocystis, oxygen declined below detectable limits below a depth of 15 m, corresponding with an increase in microorganisms known to be anaerobic. In contrast to previously sampled years, both metagenomic and metatranscriptomic data suggested a depletion of anaerobic sulfate-reducing microorganisms throughout the lake's water column. Transcripts associated with photosystem I and II were expressed at both 2 m and 25 m, suggesting that limited oxygen production could occur at extremely low light levels at depth within the lake. Blooms of Picocystis appear to correspond with a loss of microbial activity such as sulfate reduction within Mono Lake, yet microorganisms may survive within the sediment to repopulate the lake water column as the bloom subsides

Metabolic Capability and Phylogenetic Diversity of Mono Lake during a Bloom of the Eukaryotic Phototroph Picocystis sp. Strain ML

Algal blooms in lakes are often associated with anthropogenic eutrophication; however, they can occur without the human introduction of nutrients to a lake. A rare bloom of the alga Picocystis sp. strain ML occurred in the spring of 2016 at Mono Lake, a hyperalkaline lake in California, which was also at the apex of a multiyear-long drought. These conditions presented a unique sampling opportunity to investigate microbiological dynamics and potential metabolic function during an intense natural algal bloom. We conducted a comprehensive molecular analysis along a depth transect near the center of the lake from the surface to a depth of 25 m in June 2016. Across sampled depths, rRNA gene sequencing revealed that Picocystis-associated chloroplasts were found at 40 to 50% relative abundance, greater than values recorded previously. Despite high relative abundances of the photosynthetic oxygenic algal genus Picocystis, oxygen declined below detectable limits below a depth of 15 m, corresponding with an increase in microorganisms known to be anaerobic. In contrast to previously sampled years, both metagenomic and metatranscriptomic data suggested a depletion of anaerobic sulfate-reducing microorganisms throughout the lake's water column. Transcripts associated with photosystem I and II were expressed at both 2 m and 25 m, suggesting that limited oxygen production could occur at extremely low light levels at depth within the lake. Blooms of Picocystis appear to correspond with a loss of microbial activity such as sulfate reduction within Mono Lake, yet microorganisms may survive within the sediment to repopulate the lake water column as the bloom subsides

Carnosine:can understanding its actions on energy metabolism and protein homeostasis inform its therapeutic potential?

The dipeptide carnosine (β-alanyl-L-histidine) has contrasting but beneficial effects on cellular activity. It delays cellular senescence and rejuvenates cultured senescent mammalian cells. However, it also inhibits the growth of cultured tumour cells. Based on studies in several organisms, we speculate that carnosine exerts these apparently opposing actions by affecting energy metabolism and/or protein homeostasis (proteostasis). Specific effects on energy metabolism include the dipeptide's influence on cellular ATP concentrations. Carnosine's ability to reduce the formation of altered proteins (typically adducts of methylglyoxal) and enhance proteolysis of aberrant polypeptides is indicative of its influence on proteostasis. Furthermore these dual actions might provide a rationale for the use of carnosine in the treatment or prevention of diverse age-related conditions where energy metabolism or proteostasis are compromised. These include cancer, Alzheimer's disease, Parkinson's disease and the complications of type-2 diabetes (nephropathy, cataracts, stroke and pain), which might all benefit from knowledge of carnosine's mode of action on human cells. © 2013 Hipkiss et al.; licensee Chemistry Central Ltd

Low Mo mobility during the laterization of ultramafic bedrock: Evidence from the East Sulawesi Ophiolite, Indonesia

Mo (isotope) cycling during the chemical weathering of ultramafic bedrock remains poorly quantified, mainly as a result of the analytical challenges caused by low Mo concentration and complex matrix effects in these rock types. Here, we utilize an improved chemical separation protocol that enables the extraction of Mo while reducing Ru and Fe matrix effects. We apply this method to lateritic weathering profiles developed over ultramafic bedrock in a high-intensity tropical weathering regime. The Mo concentrations in the laterite samples are higher (0.022 to 0.58 μg⋅g-1) than those of the peridotite bedrock (0.006 to 0.021 μg⋅g-1). The concentration-weighted average δ98Mo of the laterite profiles is -0.05‰ (n = 17), which is slightly higher but very close to the average δ98Mo of the peridotite bedrock (0.17 ± 0.21‰; 2SD; n = 5). Weakly-laterized samples show somewhat low δ98Mo with a minimum of -1.03‰ and Δ98Molaterite-bedrock up to -0.86‰, possibly as a result of preferential adsorption of liberated light Mo onto Fe (oxyhydr)oxides. In contrast, strongly-laterized samples show an overall Mo concentration gain and a slight isotopic shift towards higher bulk δ98Mo, with a maximum δ98Mo of +0.12‰ and Δ98Molaterite-bedrock up to +0.42‰. This likely reflects the re-scavenging of Mo released from weakly-laterized horizons to the ubiquitous Fe (oxyhydr)oxides, with potential superimposition of additional heavy Mo from atmospheric and/or groundwater input. Overall, this suggests a small contribution of dissolved Mo derived from ultramafic bedrock weathering in tropical settings to the aquatic environment

Photoferrotrophy, deposition of banded iron formations, and methane production in Archean oceans

Banded iron formation (BIF) deposition was the likely result of oxidation of ferrous iron in seawater by either oxygenic photosynthesis or iron-dependent anoxygenic photosynthesis-photoferrotrophy. BIF deposition, however, remains enigmatic because the photosynthetic biomass produced during iron oxidation is conspicuously absent from BIFs. We have addressed this enigma through experiments with photosynthetic bacteria and modeling of biogeochemical cycling in the Archean oceans. Our experiments reveal that, in the presence of silica, photoferrotroph cell surfaces repel iron (oxyhydr)oxides. In silica-rich Precambrian seawater, this repulsion would separate biomass from ferric iron and would lead to large-scale deposition of BIFs lean in organic matter. Excess biomass not deposited with BIF would have deposited in coastal sediments, formed organic-rich shales, and fueled microbial methanogenesis. As a result, the deposition of BIFs by photoferrotrophs would have contributed fluxes of methane to the atmosphere and thus helped to stabilize Earth's climate under a dim early Sun

Vivianite formation in ferruginous sediments from Lake Towuti, Indonesia

Ferruginous lacustrine systems, such as Lake Towuti, Indonesia, are characterized by a specific type of phosphorus cycling in which hydrous ferric iron (oxyhydr)oxides trap and precipitate phosphorus to the sediment, which reduces its bioavailability in the water column and thereby restricts primary production. The oceans were also ferruginous during the Archean, thus understanding the dynamics of phosphorus in modern-day ferruginous analogues may shed light on the marine biogeochemical cycling that dominated much of Earth's history. Here we report the presence of large crystals (>5 mm) and nodules (>5 cm) of vivianite – a ferrous iron phosphate – in sediment cores from Lake Towuti and address the processes of vivianite formation, phosphorus retention by iron and the related mineral transformations during early diagenesis in ferruginous sediments. Core scan imaging, together with analyses of bulk sediment and pore water geochemistry, document a 30 m long interval consisting of sideritic and non-sideritic clayey beds and diatomaceous oozes containing vivianites. High-resolution imaging of vivianite revealed continuous growth of crystals from tabular to rosette habits that eventually form large (up to 7 cm) vivianite nodules in the sediment. Mineral inclusions like millerite and siderite reflect diagenetic mineral formation antecedent to the one of vivianite that is related to microbial reduction of iron and sulfate. Together with the pore water profiles, these data suggest that the precipitation of millerite, siderite and vivianite in soft ferruginous sediments stems from the progressive consumption of dissolved terminal electron acceptors and the typical evolution of pore water geochemistry during diagenesis. Based on solute concentrations and modeled mineral saturation indices, we inferred vivianite formation to initiate around 20 m depth in the sediment. Negative δ56Fe values of vivianite indicated incorporation of kinetically fractionated light Fe2+ into the crystals, likely derived from active reduction and dissolution of ferric oxides and transient ferrous phases during early diagenesis. The size and growth history of the nodules indicate that, after formation, continued growth of vivianite crystals constitutes a sink for P during burial, resulting in long-term P sequestration in ferruginous sediment

Siderite C-O-Fe isotope compositions, pore water geochemistry and bulk sediment parameters from the 100-m-long core TDP-1A of the ICDP Towuti Drilling Project, Lake Towuti, Indonesia

Siderite C-O-Fe isotope compositions, pore water geochemistry and bulk sediment measurements covering the 100 m-long core from drill site TDP-1A in ferruginous Lake Towuti, Indonesia. Samples were obtained during the International Continental Scientific Drilling Program (ICDP) coring operations of the Towuti Drilling Project (TDP) from May to July 2015

A one-million-year isotope record from siderites formed in modern ferruginous sediments

Ancient iron formations hold important records of environmental conditions during the Precambrian eons. Reconstructions of past oceanic systems require investigation of modern ferruginous analogs to disentangle water column and diagenetic signals recorded in iron-bearing minerals. We analyzed oxygen, iron, and carbon isotopes in siderite, a ferrous carbonate phase commonly used as an environmental proxy, from a 100-m-long record spanning a 1 Ma depositional history in ferruginous Lake Towuti, Indonesia. Combining bulk sediment and pore water geochemistry, we traced processes controlling siderite isotope signatures. We show that siderite oxygen isotope compositions (δ18O) reflect in-lake hydrological and depositional conditions. Low iron isotope values (δ56Fe) record water column oxygenation events over geological timescales, with minor diagenetic partitioning of Fe isotopes by microbial iron reduction after deposition. The carbon isotope compositions (δ13C) reflect the incorporation of biogenic HCO3−, which is consistent with sediment organic matter remineralization lasting over ca. 200 ka after burial. Positive δ13C excursions indicate an increased production of biogenic methane that escaped the sediment during low lake levels. Diffusion across the sediment−water interface during initial formation of siderites tends to align the isotope signatures of bottom waters to those of pore waters. As microbial reduction of ferric iron and oxidation of organic matter proceed and saturate pore water conditions with respect to siderite, overgrowth on nuclei partially mutes the environmental signal inherited from past bottom waters over ca. 1 Ma. Because high depositional fluxes of ferric iron and organic matter in early oceans would have promoted similar microbial processes in ferruginous deposits prior to lithification, the environmental record contained in siderite grains can successively integrate depositional and early diagenetic signals over short geological timescales