31 research outputs found
Pour une démocratie socio-environnementale : cadre pour une plate-forme participative « transition écologique »
Contribution publiĂ©e in Penser une dĂ©mocratie alimentaire Volume II â Proposition Lascaux entre ressources naturelles et besoins fondamentaux, F. Collart Dutilleul et T. BrĂ©ger (dir), Inida, San JosĂ©, 2014, pp. 87-111.International audienceLâanthropocĂšne triomphant actuel, avec ses forçages environnementaux et sociaux, est Ă lâorigine de lâaccĂ©lĂ©ration des dĂ©gradations des milieux de vie sur Terre et de lâaccentuation des tensions sociales et gĂ©opolitiques. Passer Ă un anthropocĂšne de gestion Ă©quitable, informĂ© et sobre vis-Ă -vis de toutes les ressources et dans tous les secteurs dâactivitĂ© (slow anthropocene), impose une analyse prĂ©alable sur lâensemble des activitĂ©s et des rapports humains. Cette transition dite « Ă©cologique », mais en rĂ©alitĂ© Ă la fois sociĂ©tale et Ă©cologique, est tout sauf un ajustement technique de secteurs dits prioritaires et technocratiques. Elle est avant tout culturelle, politique et philosophique au sens propre du terme. Elle est un horizon pour des trajectoires de dĂ©veloppement humain, pour des constructions sociales et Ă©conomiques, censĂ©es redĂ©finir socialement richesse, bien-ĂȘtre, travail etc. La dĂ©nomination « transition Ă©cologique » est largement vĂ©hiculĂ©e, mais ses bases conceptuelles ne sont pas entiĂšrement acquises ni mĂȘme Ă©laborĂ©es. Dans ce contexte, les Ă©tudiants en premiĂšre annĂ©e de Master BioSciences Ă lâEcole Normale SupĂ©rieure (ENS) de Lyon ont prĂ©parĂ© une premiĂšre Ă©tude analytique de ce changement radical et global de sociĂ©tĂ© pour mieux comprendre dans quelle sociĂ©tĂ© ils souhaitent vivre, en donnant du sens aux activitĂ©s humaines prĂ©sentes et Ă venir. Une trentaine de dossiers sur divers secteurs dâactivitĂ©s et acteurs de la sociĂ©tĂ© ont Ă©tĂ© produits et ont servis de support Ă cette synthĂšse. Plus largement, le but est de construire un socle conceptuel et une plate-forme de travail sur lesquels les questions de fond, mais aussi opĂ©rationnelles, peuvent ĂȘtre posĂ©es et Ă©tudiĂ©es en permanence. Cette dĂ©marche participative est ouverte Ă la collectivitĂ© sur le site http://institutmichelserres.ens-lyon.fr/
Computational Reverse-Engineering of a Spider-Venom Derived Peptide Active Against Plasmodium falciparum SUB1
merozoites and invasion into erythrocytes. As PfSUB1 has emerged as an interesting drug target, we explored the hypothesis that PcFK1 targeted PfSUB1 enzymatic activity. culture in a range compatible with our bioinformatics analysis. Using contact analysis and free energy decomposition we propose that residues A14 and Q15 are important in the interaction with PfSUB1.Our computational reverse engineering supported the hypothesis that PcFK1 targeted PfSUB1, and this was confirmed by experimental evidence showing that PcFK1 inhibits PfSUB1 enzymatic activity. This outlines the usefulness of advanced bioinformatics tools to predict the function of a protein structure. The structural features of PcFK1 represent an interesting protein scaffold for future protein engineering
TRY plant trait database â enhanced coverage and open access
Plant traits - the morphological, anatomical, physiological, biochemical and phenological characteristics of plants - determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of traitâbased plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits - almost complete coverage for âplant growth formâ. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and traitâenvironmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives
TRY plant trait database â enhanced coverage and open access
Plant traitsâthe morphological, anatomical, physiological, biochemical and phenological characteristics of plantsâdetermine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traitsâalmost complete coverage for âplant growth formâ. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and traitâenvironmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives.Rest of authors: Decky Junaedi, Robert R. Junker, Eric Justes, Richard Kabzems, Jeffrey Kane, Zdenek Kaplan, Teja Kattenborn, Lyudmila Kavelenova, Elizabeth Kearsley, Anne Kempel, Tanaka Kenzo, Andrew Kerkhoff, Mohammed I. Khalil, Nicole L. Kinlock, Wilm Daniel Kissling, Kaoru Kitajima, Thomas Kitzberger, Rasmus KjĂžller, Tamir Klein, Michael Kleyer, Jitka KlimeĆĄovĂĄ, Joice Klipel, Brian Kloeppel, Stefan Klotz, Johannes M. H. Knops, Takashi Kohyama, Fumito Koike, Johannes Kollmann, Benjamin Komac, Kimberly Komatsu, Christian König, Nathan J. B. Kraft, Koen Kramer, Holger Kreft, Ingolf KĂŒhn, Dushan Kumarathunge, Jonas Kuppler, Hiroko Kurokawa, Yoko Kurosawa, Shem Kuyah, Jean-Paul Laclau, Benoit Lafleur, Erik Lallai, Eric Lamb, Andrea Lamprecht, Daniel J. Larkin, Daniel Laughlin, Yoann Le Bagousse-Pinguet, Guerric le Maire, Peter C. le Roux, Elizabeth le Roux, Tali Lee, Frederic Lens, Simon L. Lewis, Barbara Lhotsky, Yuanzhi Li, Xine Li, Jeremy W. Lichstein, Mario Liebergesell, Jun Ying Lim, Yan-Shih Lin, Juan Carlos Linares, Chunjiang Liu, Daijun Liu, Udayangani Liu, Stuart Livingstone, Joan LlusiĂ , Madelon Lohbeck, Ălvaro LĂłpez-GarcĂa, Gabriela Lopez-Gonzalez, ZdeĆka LososovĂĄ, FrĂ©dĂ©rique Louault, BalĂĄzs A. LukĂĄcs, Petr LukeĆĄ, Yunjian Luo, Michele Lussu, Siyan Ma, Camilla Maciel Rabelo Pereira, Michelle Mack, Vincent Maire, Annikki MĂ€kelĂ€, Harri MĂ€kinen, Ana Claudia Mendes Malhado, Azim Mallik, Peter Manning, Stefano Manzoni, Zuleica Marchetti, Luca Marchino, Vinicius Marcilio-Silva, Eric Marcon, Michela Marignani, Lars Markesteijn, Adam Martin, Cristina MartĂnez-Garza, Jordi MartĂnez-Vilalta, Tereza MaĆĄkovĂĄ, Kelly Mason, Norman Mason, Tara Joy Massad, Jacynthe Masse, Itay Mayrose, James McCarthy, M. Luke McCormack, Katherine McCulloh, Ian R. McFadden, Brian J. McGill, Mara Y. McPartland, Juliana S. Medeiros, Belinda Medlyn, Pierre Meerts, Zia Mehrabi, Patrick Meir, Felipe P. L. Melo, Maurizio Mencuccini, CĂ©line Meredieu, Julie Messier, Ilona MĂ©szĂĄros, Juha Metsaranta, Sean T. Michaletz, Chrysanthi Michelaki, Svetlana Migalina, Ruben Milla, Jesse E. D. Miller, Vanessa Minden, Ray Ming, Karel Mokany, Angela T. Moles, Attila MolnĂĄr V, Jane Molofsky, Martin Molz, Rebecca A. Montgomery, Arnaud Monty, Lenka MoravcovĂĄ, Alvaro Moreno-MartĂnez, Marco Moretti, Akira S. Mori, Shigeta Mori, Dave Morris, Jane Morrison, Ladislav Mucina, Sandra Mueller, Christopher D. Muir, Sandra Cristina MĂŒller, François Munoz, Isla H. Myers-Smith, Randall W. Myster, Masahiro Nagano, Shawna Naidu, Ayyappan Narayanan, Balachandran Natesan, Luka Negoita, Andrew S. Nelson, Eike Lena Neuschulz, Jian Ni, Georg Niedrist, Jhon Nieto, Ălo Niinemets, Rachael Nolan, Henning Nottebrock, Yann Nouvellon, Alexander Novakovskiy, The Nutrient Network, Kristin Odden Nystuen, Anthony O'Grady, Kevin O'Hara, Andrew O'Reilly-Nugent, Simon Oakley, Walter Oberhuber, Toshiyuki Ohtsuka, Ricardo Oliveira, Kinga Ăllerer, Mark E. Olson, Vladimir Onipchenko, Yusuke Onoda, Renske E. Onstein, Jenny C. Ordonez, Noriyuki Osada, Ivika Ostonen, Gianluigi Ottaviani, Sarah Otto, Gerhard E. Overbeck, Wim A. Ozinga, Anna T. Pahl, C. E. Timothy Paine, Robin J. Pakeman, Aristotelis C. Papageorgiou, Evgeniya Parfionova, Meelis PĂ€rtel, Marco Patacca, Susana Paula, Juraj Paule, Harald Pauli, Juli G. Pausas, Begoña Peco, Josep Penuelas, Antonio Perea, Pablo Luis Peri, Ana Carolina Petisco-Souza, Alessandro Petraglia, Any Mary Petritan, Oliver L. Phillips, Simon Pierce, ValĂ©rio D. Pillar, Jan Pisek, Alexandr Pomogaybin, Hendrik Poorter, Angelika Portsmuth, Peter Poschlod, Catherine Potvin, Devon Pounds, A. Shafer Powell, Sally A. Power, Andreas Prinzing, Giacomo Puglielli, Petr PyĆĄek, Valerie Raevel, Anja Rammig, Johannes Ransijn, Courtenay A. Ray, Peter B. Reich, Markus Reichstein, Douglas E. B. Reid, Maxime RĂ©jou-MĂ©chain, Victor Resco de Dios, Sabina Ribeiro, Sarah Richardson, Kersti Riibak, Matthias C. Rillig, Fiamma Riviera, Elisabeth M. R. Robert, Scott Roberts, Bjorn Robroek, Adam Roddy, Arthur Vinicius Rodrigues, Alistair Rogers, Emily Rollinson, Victor Rolo, Christine Römermann, Dina Ronzhina, Christiane Roscher, Julieta A. Rosell, Milena Fermina Rosenfield, Christian Rossi, David B. Roy, Samuel Royer-Tardif, Nadja RĂŒger, Ricardo Ruiz-Peinado, Sabine B. Rumpf, Graciela M. Rusch, Masahiro Ryo, Lawren Sack, Angela Saldaña, Beatriz Salgado-Negret, Roberto Salguero-Gomez, Ignacio Santa-Regina, Ana Carolina Santacruz-GarcĂa, Joaquim Santos, Jordi Sardans, Brandon Schamp, Michael Scherer-Lorenzen, Matthias Schleuning, Bernhard Schmid, Marco Schmidt, Sylvain Schmitt, Julio V. Schneider, Simon D. Schowanek, Julian Schrader, Franziska Schrodt, Bernhard Schuldt, Frank Schurr, Galia Selaya Garvizu, Marina Semchenko, Colleen Seymour, Julia C. Sfair, Joanne M. Sharpe, Christine S. Sheppard, Serge Sheremetiev, Satomi Shiodera, Bill Shipley, Tanvir Ahmed Shovon, Alrun SiebenkĂ€s, Carlos Sierra, Vasco Silva, Mateus Silva, Tommaso Sitzia, Henrik Sjöman, Martijn Slot, Nicholas G. Smith, Darwin Sodhi, Pamela Soltis, Douglas Soltis, Ben Somers, GrĂ©gory Sonnier, Mia Vedel SĂžrensen, Enio Egon Sosinski Jr, Nadejda A. Soudzilovskaia, Alexandre F. Souza, Marko Spasojevic, Marta Gaia Sperandii, Amanda B. Stan, James Stegen, Klaus Steinbauer, Jörg G. Stephan, Frank Sterck, Dejan B. Stojanovic, Tanya Strydom, Maria Laura Suarez, Jens-Christian Svenning, Ivana SvitkovĂĄ, Marek Svitok, Miroslav Svoboda, Emily Swaine, Nathan Swenson, Marcelo Tabarelli, Kentaro Takagi, Ulrike Tappeiner, RubĂ©n Tarifa, Simon Tauugourdeau, Cagatay Tavsanoglu, Mariska te Beest, Leho Tedersoo, Nelson Thiffault, Dominik Thom, Evert Thomas, Ken Thompson, Peter E. Thornton, Wilfried Thuiller, LubomĂr TichĂœ, David Tissue, Mark G. Tjoelker, David Yue Phin Tng, Joseph Tobias, PĂ©ter Török, Tonantzin Tarin, JosĂ© M. Torres-Ruiz, BĂ©la TĂłthmĂ©rĂ©sz, Martina Treurnicht, Valeria Trivellone, Franck Trolliet, Volodymyr Trotsiuk, James L. Tsakalos, Ioannis Tsiripidis, Niklas Tysklind, Toru Umehara, Vladimir Usoltsev, Matthew Vadeboncoeur, Jamil Vaezi, Fernando Valladares, Jana Vamosi, Peter M. van Bodegom, Michiel van Breugel, Elisa Van Cleemput, Martine van de Weg, Stephni van der Merwe, Fons van der Plas, Masha T. van der Sande, Mark van Kleunen, Koenraad Van Meerbeek, Mark Vanderwel, Kim AndrĂ© Vanselow, Angelica VĂ„rhammar, Laura Varone, Maribel Yesenia Vasquez Valderrama, Kiril Vassilev, Mark Vellend, Erik J. Veneklaas, Hans Verbeeck, Kris Verheyen, Alexander Vibrans, Ima Vieira, Jaime VillacĂs, Cyrille Violle, Pandi Vivek, Katrin Wagner, Matthew Waldram, Anthony Waldron, Anthony P. Walker, Martyn Waller, Gabriel Walther, Han Wang, Feng Wang, Weiqi Wang, Harry Watkins, James Watkins, Ulrich Weber, James T. Weedon, Liping Wei, Patrick Weigelt, Evan Weiher, Aidan W. Wells, Camilla Wellstein, Elizabeth Wenk, Mark Westoby, Alana Westwood, Philip John White, Mark Whitten, Mathew Williams, Daniel E. Winkler, Klaus Winter, Chevonne Womack, Ian J. Wright, S. Joseph Wright, Justin Wright, Bruno X. Pinho, Fabiano Ximenes, Toshihiro Yamada, Keiko Yamaji, Ruth Yanai, Nikolay Yankov, Benjamin Yguel, KĂĄtia Janaina Zanini, Amy E. Zanne, David ZelenĂœ, Yun-Peng Zhao, Jingming Zheng, Ji Zheng, Kasia ZiemiĆska, Chad R. Zirbel, Georg Zizka, IriĂ© Casimir Zo-Bi, Gerhard Zotz, Christian Wirth.Max Planck Institute for Biogeochemistry;
Max Planck Society;
German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig;
International Programme of Biodiversity Science (DIVERSITAS);
International Geosphere-Biosphere Programme (IGBP);
Future Earth;
French Foundation for Biodiversity Research (FRB);
GIS âClimat, Environnement et SociĂ©tĂ©'.http://wileyonlinelibrary.com/journal/gcbhj2021Plant Production and Soil Scienc
Spatial, temporal and interindividual variations of survival and phenology of reproduction in the blue tit (Cyanistes caeruleus)
LâĂ©tude des traits dâhistoires de vie des organismes et de leurs covariations est extrĂȘmement informative sur la dĂ©mographie des populations ainsi que sur leur Ă©volution. Parmi ces traits, la survie adulte est centrale en tant que composante de la valeur sĂ©lective. La phĂ©nologie de la reproduction est Ă©galement un Ă©lĂ©ment clef par ses consĂ©quences majeures sur la valeur sĂ©lective et sa sensibilitĂ© aux variations environnementales, notamment dans le contexte actuel de changement climatique. LâĂ©tude du lien entre ces deux traits est dĂ©terminante dans la comprĂ©hension des relations complexes entre traits dâhistoires de vie dans une population, mais il reste cependant peu Ă©tudiĂ©. Cette thĂšse vise Ă explorer les variations de survie dans quatre populations de mĂ©sanges bleues (Cyanistes caeruleus) en rĂ©gion mĂ©diterranĂ©enne, et Ă examiner lâexistence de lien entre celle-ci et dâautres composantes dĂ©mographiques ou environnementales des populations, notamment la phĂ©nologie de la reproduction. GrĂące Ă des modĂšles de type capture-marquage-recapture, nous avons pu estimer les taux de survie dans les diffĂ©rentes populations. Nous avons montrĂ© que dans lâune de ces populations, la phĂ©nologie de la population impactait la survie adulte au niveau populationnel (une diminution de la date de ponte mĂ©diane de la population est liĂ©e Ă une diminution de la survie) ainsi quâau niveau individuel en sens contraire (les individus les plus prĂ©coces au sein de la population sont ceux qui ont la survie la plus Ă©levĂ©e dans lâannĂ©e qui suit). Ces covariations sâinscrivent dans un systĂšme de relations complexe qui fait intervenir le succĂšs reproducteur (liĂ© Ă la date de ponte), lâenvironnement (effet sur la date de ponte et sur le succĂšs reproducteur), et la densitĂ© de population (effets sur la date de ponte, le succĂšs reproducteur et sur la survie adulte). Au total, nos travaux Ă©clairent dâun jour nouveau les processus liĂ©s Ă la survie adulte et ses variations spatio-temporelles dans les populations Ă©tudiĂ©es, ainsi que leurs liens avec les variations environnementales.The study of life history traits and their covariations is critical to fully understand population demography and evolution. Among these traits, adult survival is central, as a component of fitness. Reproductive phenology is also a key element through its major consequences on fitness and through its sensitivity to environmental variations, particularly in the current context of climate change. The study of the relationship between these two traits is crucial in understanding the complex relationships between life history traits in a population. It is however surprisingly not often studied. This thesis aims to explore variations in survival in four populations of blue tit (Cyanistes caeruleus) in the Mediterranean region, and to examine the existence of links between survival and other demographic or environmental components of populations, including reproductive phenology. Using capture-mark-recapture models, we were able to estimate survival probabilities in the different populations. We showed that in one of these populations, the phenology of the population impacted adult survival at the population level (a decrease in the median laying date of the population causes a decrease in subsequent survival) as well as at the individual level (but in the opposite direction: the earliest individuals in the population are those who have the highest survival probabilities in the following year). These covariations are part of a complex relationship system that involves reproductive success (related to laying date), environment (which impacts laying date and reproductive success), and population density (which has negative effects on laying date, reproductive success and adult survival). In total, our work sheds new light on the processes related to adult survival and its spatial and temporal variations in the populations studied, as well as their links with environmental variations
Variations spatiales, temporelles et interindividuelles de survie et de phénologie de la reproduction chez la mésange bleue (Cyanistes caeruleus)
The study of life history traits and their covariations is critical to fully understand population demography and evolution. Among these traits, adult survival is central, as a component of fitness. Reproductive phenology is also a key element through its major consequences on fitness and through its sensitivity to environmental variations, particularly in the current context of climate change. The study of the relationship between these two traits is crucial in understanding the complex relationships between life history traits in a population. It is however surprisingly not often studied. This thesis aims to explore variations in survival in four populations of blue tit (Cyanistes caeruleus) in the Mediterranean region, and to examine the existence of links between survival and other demographic or environmental components of populations, including reproductive phenology. Using capture-mark-recapture models, we were able to estimate survival probabilities in the different populations. We showed that in one of these populations, the phenology of the population impacted adult survival at the population level (a decrease in the median laying date of the population causes a decrease in subsequent survival) as well as at the individual level (but in the opposite direction: the earliest individuals in the population are those who have the highest survival probabilities in the following year). These covariations are part of a complex relationship system that involves reproductive success (related to laying date), environment (which impacts laying date and reproductive success), and population density (which has negative effects on laying date, reproductive success and adult survival). In total, our work sheds new light on the processes related to adult survival and its spatial and temporal variations in the populations studied, as well as their links with environmental variations.LâĂ©tude des traits dâhistoires de vie des organismes et de leurs covariations est extrĂȘmement informative sur la dĂ©mographie des populations ainsi que sur leur Ă©volution. Parmi ces traits, la survie adulte est centrale en tant que composante de la valeur sĂ©lective. La phĂ©nologie de la reproduction est Ă©galement un Ă©lĂ©ment clef par ses consĂ©quences majeures sur la valeur sĂ©lective et sa sensibilitĂ© aux variations environnementales, notamment dans le contexte actuel de changement climatique. LâĂ©tude du lien entre ces deux traits est dĂ©terminante dans la comprĂ©hension des relations complexes entre traits dâhistoires de vie dans une population, mais il reste cependant peu Ă©tudiĂ©. Cette thĂšse vise Ă explorer les variations de survie dans quatre populations de mĂ©sanges bleues (Cyanistes caeruleus) en rĂ©gion mĂ©diterranĂ©enne, et Ă examiner lâexistence de lien entre celle-ci et dâautres composantes dĂ©mographiques ou environnementales des populations, notamment la phĂ©nologie de la reproduction. GrĂące Ă des modĂšles de type capture-marquage-recapture, nous avons pu estimer les taux de survie dans les diffĂ©rentes populations. Nous avons montrĂ© que dans lâune de ces populations, la phĂ©nologie de la population impactait la survie adulte au niveau populationnel (une diminution de la date de ponte mĂ©diane de la population est liĂ©e Ă une diminution de la survie) ainsi quâau niveau individuel en sens contraire (les individus les plus prĂ©coces au sein de la population sont ceux qui ont la survie la plus Ă©levĂ©e dans lâannĂ©e qui suit). Ces covariations sâinscrivent dans un systĂšme de relations complexe qui fait intervenir le succĂšs reproducteur (liĂ© Ă la date de ponte), lâenvironnement (effet sur la date de ponte et sur le succĂšs reproducteur), et la densitĂ© de population (effets sur la date de ponte, le succĂšs reproducteur et sur la survie adulte). Au total, nos travaux Ă©clairent dâun jour nouveau les processus liĂ©s Ă la survie adulte et ses variations spatio-temporelles dans les populations Ă©tudiĂ©es, ainsi que leurs liens avec les variations environnementales
Using miniaturized GPS archival tags to assess home range features of a small plunge-diving bird: the European Kingfisher (Alcedo atthis)
Abstract Background The European Kingfisher (Alcedo atthis) is a small plunge-diving bird, today considered a species of conservation concern in Europe given its rapid population decline observed across the continent. We implemented a pilot study aimed at providing first data allowing to: (1) assess home range features of the European Kingfisher for populations with unevenly distributed feeding habitats; (2) define conservation implications for habitats exploited by such populations; and (3) evaluate possibilities for developing GPS tracking schemes dedicated to home range studies for this species that could be possibly applied to other small plunge-diving birds. Methods In 2018 and 2019, we equipped 16 breeding European Kingfishers sampled within the marshes of the Gironde Estuary (France), with miniaturized and waterproof GPS archival tags deployed with leg-loop harnesses (total equipment massâ=â1.4 g; average bird massâ=â40.18â±â1.12 g). Results On average, we collected 35.31â±â6.66 locations usable for analyses, without a significant effect on bird body condition (nâ=â13 tags retrieved). Data analyses highlighted rather limited home ranges exploited by birds (averageâ=â2.50â±â0.55 ha), composed on average by 2.78â±â0.40 location nuclei. Our results also underscore: (1) a rather important home range fragmentation index (0.36â±â0.08); and (2) the use by birds of different types of small wetlands (wet ditches, small ponds or small waterholes), often exploited in addition to habitats encompassing nest locations. Conclusions Our study reveals interesting GPS tracking possibilities for small plunge-diving birds such as the European Kingfisher. For this species, today classified as vulnerable in Europe, our results underline the importance of developing conservation and ecological restoration policies for wetland networks that would integrate small wetlands particularly sensitive to global change
Identifying drivers of spatio-temporalvariation in survival in four blue tit populations
International audienceIn a context of rapid climate change, the influence of large-scale and local climate on population demography is increasingly scrutinized, yet studies are usually focused on one population. Demographic parameters, including survival, can vary significantly across populations of a given species, depending on global or local climatic fluctuations but also on many other population-specific parameters such as breeding density, habitat naturalness, predation or parasitism. Such ecological differences between populations could lead to different paces-of-life (POL), whereby populations where individuals display higher reproductive investment and bolder behaviours would have lower survival probabilities. We use here long-term (19 to 38 years) monitoring datasets from four Mediterranean populations of blue tits (Cyanistes caeruleus) to investigate the effects of sex, age class, large-scale and local climate temporal variation and population breeding density, on adult survival, using Capture-Mark-Recapture modelling. Environment heterogeneity in these four populations (two in evergreen and two in deciduous forests) has been linked to strong multi-trait phenotypic variation, suggesting blue tits in deciduous forests display faster POL compared to their conspecifics in evergreen habitats. The present results show heterogeneity in average survival probabilities across the four populations, with, as predicted, lower survival in the 'fast' blue tits occupying deciduous habitats. Interestingly, the year-to-year variation in survival probabilities was synchronous among populations. This suggests that regional environmental conditions could drive survival fluctuations across populations. However, breeding densities were not correlated across populations, and we found no evidence that adult survival is correlated with either large-scale or local, climate temporal variation in these four blue tit populations. Finally, two of the focal populations displayed a linear temporal decrease in adult survival over the study period, calling for further investigation to explain this decline. Overall, this multi-site study shows that blue tit parental survival from one spring to the next can vary substantially across years, in a synchronous way across populations, yet the climate indices we used are not correlated with the temporal variation. This calls for further investigations in other potential drivers such as resource (in particular insect) abundance, predation or parasitism
Bread Wheat TaSPO11â1 exhibits evolutionary conserved function in meiotic recombination across distant plant species
International audienceThe manipulation of meiotic recombination in crops is essential to develop new plant varieties rapidly, helping to produce more cultivars in a sustainable manner. One option is to control the formation and repair of the meiosis-specific DNA double-strand breaks (DSBs) that initiate recombination between the homologous chromosomes and ultimately lead to crossovers. These DSBs are introduced by the evolutionarily conserved topoisomerase-like protein SPO11 and associated proteins. Here, we characterized the homoeologous copies of the SPO11-1 protein in hexaploid bread wheat (Triticum aestivum). The genome contains threeSPO11-1gene copies that exhibit 93-95% identity at the nucleotide level, and clearly the A and D copies originated from the diploid ancestorsTriticum urartuandAegilops tauschii, respectively. Furthermore, phylogenetic analysis of 105 plant genomes revealed a clear partitioning between monocots and dicots, with the seven main motifs being almost fully conserved, even between clades. The functional similarity of the proteins among monocots was confirmed through complementation analysis of theOryza sativa(rice)spo11-1mutant by the wheatTaSPO11-1-5Dcoding sequence. Also, remarkably, although the wheat and Arabidopsis SPO11-1 proteins share only 55% identity and the partner proteins also differ, theTaSPO11-1-5DcDNA significantly restored the fertility of the Arabidopsisspo11-1mutant, indicating a robust functional conservation of the SPO11-1 protein activity across distant plants. These successful heterologous complementation assays, using both Arabidopsis and rice hosts, are good surrogates to validate the functionality of candidate genes and cDNA, as well as variant constructs, when the transformation and mutant production in wheat is much longer and more tedious