Bremsstrahlung from a Microscopic Model of Relativistic Heavy Ion Collisions

We compute bremsstrahlung arising from the acceleration of individual charged baryons and mesons during the time evolution of high-energy Au+Au collisions at the Relativistic Heavy Ion Collider using a microscopic transport model. We elucidate the connection between bremsstrahlung and charge stopping by colliding artificial pure proton on pure neutron nuclei. From the intensity of low energy bremsstrahlung, the time scale and the degree of stopping could be accurately extracted without measuring any hadronic observables.Comment: 25 pages using revtex with 9 embedded EPS figures, modified somewhat the discussion on the method in sect. II B, to appear in Phys. Rev.

Schramm-Loewner Equations Driven by Symmetric Stable Processes

We consider shape, size and regularity of the hulls of the chordal Schramm-Loewner evolution driven by a symmetric alpha-stable process. We obtain derivative estimates, show that the complements of the hulls are Hoelder domains, prove that the hulls have Hausdorff dimension 1, and show that the trace is right-continuous with left limits almost surely.Comment: 22 pages, 4 figure

VISHNU hybrid model for viscous QCD matter at RHIC and LHC energies

In this proceeding, we briefly describe the viscous hydrodynamics + hadron cascade hybrid model VISHNU for relativistic heavy ion collisions and report the current status on extracting the QGP viscosity from elliptic flow data.Comment: 4 pages, 1 figure, the proceedings of 7th International Workshop on Critical Point and Onset of Deconfinement, Wuhan, China, Nov. 7-11, 201

Local Thermal and Chemical Equilibration and the Equation of State in Relativistic Heavy Ion Collisions

Thermodynamical variables and their time evolution are studied for central relativistic heavy ion collisions from 10.7 to 160 AGeV in the microscopic Ultrarelativistic Quantum Molecular Dynamics model (UrQMD). The UrQMD model exhibits drastic deviations from equilibrium during the early high density phase of the collision. Local thermal and chemical equilibration of the hadronic matter seems to be established only at later stages of the quasi- isentropic expansion in the central reaction cell with volume 125 fm$^{3}$. distributions at all collision energies for $t\geq 10 fm/c$ with a unique Baryon energy spectra in this cell are approximately reproduced by Boltzmann rapidly dropping temperature. At these times the equation of state has a simple form: $P \cong (0.12-0.15) \epsilon$. At 160 AGeV the strong deviation from chemical equilibrium is found for mesons, especially for pions, even at the late stage of the reaction. The final enhancement of pions is supported by experimental data.Comment: 17 Pages, LaTex, 8 eps figures. Talk given at SQM'98 conference, 20-24 July 1998, Padova, Italy, submitted to J. Phys.

Quantifying Properties of the QCD Matter at RHIC

We will review recent results on quantitative description of global properties of bulk partonic matter at RHIC. These results include strangeness phase space factor of the partonic matter, azimuthal angular anisotropy $v_2$, and transverse momentum $p_T$ distributions of effective partons at the hadronization of bulk partonic matter. We present empirical constraints on parton energy loss in the high $p_T$ region ($>$ 5 GeV/c). A flat $R_{AA}$ as a function of $p_T$ at mid-rapidity implies a constant fraction of the parton energy loss ($\Delta p_T/p_T$) and the fraction reaches 25% for neutral $\pi$, charged hadrons and non-photonic electrons of heavy quark decays from central Au+Au collisions at $\sqrt{s_{NN}}$ 200 GeV. Collision centrality dependence of $\Delta p_T/p_T$ from Au+Au and Cu+Cu collisions indicates that the fraction is approximately proportional to particle rapidity density $dn/dy$ divided by the initial transverse overlapping area of the colliding nuclei. Implications on dynamics of parton energy loss will be discussed.Comment: To Appear in SQM2008 Conference Proceeding

Anisotropic flow at RHIC: How unique is the number-of-constituent-quark scaling?

The transverse momentum dependence of the anisotropic flow $v_2$ for $\pi$, $K$, nucleon, $\Lambda$, $\Xi$ and $\Omega$ is studied for Au+Au collisions at $\sqrt{s_{\rm NN}} = 200$ GeV within two independent string-hadron transport approaches (RQMD and UrQMD). Although both models reach only 60% of the absolute magnitude of the measured $v_2$, they both predict the particle type dependence of $v_2$, as observed by the RHIC experiments: $v_2$ exhibits a hadron-mass hierarchy (HMH) in the low $p_T$ region and a number-of-constituent-quark (NCQ) dependence in the intermediate $p_T$ region. The failure of the hadronic models to reproduce the absolute magnitude of the observed $v_2$ indicates that transport calculations of heavy ion collisions at RHIC must incorporate interactions among quarks and gluons in the early, hot and dense phase. The presence of an NCQ scaling in the string-hadron model results suggests that the particle-type dependencies observed in heavy-ion collisions at intermediate $p_T$ might be related to the hadronic cross sections in vacuum rather than to the hadronization process itself.Comment: 10 pages, 5 figures; A new author (H. Petersen) is added; A new figure (fig.1) on time evolution of elliptic flow and number of collisions is added; Version accepted for publication in J. Phys.

Nonequilibrium models of relativistic heavy-ion collisions

To be published in J. Phys. G - Proceedings of SQM 2004 : We review the results from the various hydrodynamical and transport models on the collective flow observables from AGS to RHIC energies. A critical discussion of the present status of the CERN experiments on hadron collective flow is given. We emphasize the importance of the flow excitation function from 1 to 50 A.GeV: here the hydrodynamic model has predicted the collapse of the v2-flow ~ 10 A.GeV; at 40 A.GeV it has been recently observed by the NA49 collaboration. Since hadronic rescattering models predict much larger flow than observed at this energy we interpret this observation as evidence for a first order phase transition at high baryon density r b. Moreover, the connection of the elliptic flow v2 to jet suppression is examined. It is proven experimentally that the collective flow is not faked by minijet fragmentation. Additionally, detailed transport studies show that the away-side jet suppression can only partially (< 50%) be due to hadronic rescattering. Furthermore, the change in sign of v1, v2 closer to beam rapidity is related to the occurence of a high density first order phase transition in the RHIC data at 62.5, 130 and 200 A.GeV

The native cistrome and sequence motif families of the maize ear

Elucidating the transcriptional regulatory networks that underlie growth and development requires robust ways to define the complete set of transcription factor (TF) binding sites. Although TF-binding sites are known to be generally located within accessible chromatin regions (ACRs), pinpointing these DNA regulatory elements globally remains challenging. Current approaches primarily identify binding sites for a single TF (e.g. ChIP-seq), or globally detect ACRs but lack the resolution to consistently define TF-binding sites (e.g. DNAse-seq, ATAC-seq). To address this challenge, we developed MNase-defined cistrome-Occupancy Analysis (MOA-seq), a high-resolution (< 30 bp), high-throughput, and genome-wide strategy to globally identify putative TF-binding sites within ACRs. We used MOA-seq on developing maize ears as a proof of concept, able to define a cistrome of 145,000 MOA footprints (MFs). While a substantial majority (76%) of the known ATAC-seq ACRs intersected with the MFs, only a minority of MFs overlapped with the ATAC peaks, indicating that the majority of MFs were novel and not detected by ATAC-seq. MFs were associated with promoters and significantly enriched for TF-binding and long-range chromatin interaction sites, including for the well-characterized FASCIATED EAR4, KNOTTED1, and TEOSINTE BRANCHED1. Importantly, the MOA-seq strategy improved the spatial resolution of TF-binding prediction and allowed us to identify 215 motif families collectively distributed over more than 100,000 non-overlapping, putatively-occupied binding sites across the genome. Our study presents a simple, efficient, and high-resolution approach to identify putative TF footprints and binding motifs genome-wide, to ultimately define a native cistrome atlas

Transport Theoretical Description of Collisional Energy Loss in Infinite Quark-Gluon Matter

We study the time evolution of a high-momentum gluon or quark propagating through an infinite, thermalized, partonic medium utilizing a Boltzmann equation approach. We calculate the collisional energy loss of the parton, study its temperature and flavor dependence as well as the the momentum broadening incurred through multiple interactions. Our transport calculations agree well with analytic calculations of collisional energy-loss where available, but offer the unique opportunity to address the medium response as well in a consistent fashion.Comment: 12 pages, updated with additional references and typos correcte

Spin transfer in an antiferromagnet

An electrical current can transfer spin angular momentum to a ferromagnet. This novel physical phenomenon, called spin transfer, offers unprecedented spatial and temporal control over the magnetic state of a ferromagnet and has tremendous potential in a broad range of technologies, including magnetic memory and recording. Recently, it has been predicted that spin transfer is not limited to ferromagnets, but can also occur in antiferromagnetic materials and even be stronger under some conditions. In this paper we demonstrate transfer of spin angular momentum across an interface between ferromagnetic and antiferromagnetic metals. The spin transfer is mediated by an electrical current of high density (~10^12 A/m^2) and revealed by variation in the exchange bias at the ferromagnet/antiferromagnet interface. We find that, depending on the polarity of the electrical current flowing across the interface, the strength of the exchange bias can either increase or decrease. This finding is explained by the theoretical prediction that a spin polarized current generates a torque on magnetic moments in the antiferromagnet. Current-mediated variation of exchange bias can be used to control the magnetic state of spin-valve devices, e.g., in magnetic memory applications.Comment: 5 pages, 3 figure