Automated Scar Segmentation from CMR-LGE Images Using a Deep Learning Approach

Aim. The presence of myocardial scar is a strong predictor of ventricular remodeling, cardiac dysfunction and mortality. Our aim was to assess quantitatively the presence of scar tissue from cardiac-magnetic-resonance (CMR) with late-Gadolinium-enhancement (LGE) images using a deep-learning (DL) approach. Methods. Scar segmentation was performed automatically with a DL approach based on ENet, a deep fully-convolutional neural network (FCNN). We investigated three different ENet configurations. The first configuration (C1) exploited ENet to retrieve directly scar segmentation from the CMR-LGE images. The second (C2) and third (C3) configurations performed scar segmentation in the myocardial region, which was previously obtained in a manual or automatic way with a state-of-the-art DL method, respectively. Results. When tested on 250 CMR-LGE images from 30 patients, the best-performing configuration (C2) achieved 97% median accuracy (inter-quartile (IQR) range = 4%) and 71% median Dice similarity coefficient (IQR = 32%). Conclusions. DL approaches using ENet are promising in automatically segmenting scars in CMR-LGE images, achieving higher performance when limiting the search area to the manually-defined myocardial region

Development and testing of a deep learning-based strategy for scar segmentation on CMR-LGE images

Objective: The aim of this paper is to investigate the use of fully convolutional neural networks (FCNNs) to segment scar tissue in the left ventricle from cardiac magnetic resonance with late gadolinium enhancement (CMR-LGE) images. Methods: A successful FCNN in the literature (the ENet) was modified and trained to provide scar-tissue segmentation. Two segmentation protocols (Protocol 1 and Protocol 2) were investigated, the latter limiting the scar-segmentation search area to the left ventricular myocardial tissue region. CMR-LGE from 30 patients with ischemic-heart disease were retrospectively analyzed, for a total of 250 images, presenting high variability in terms of scar dimension and location. Segmentation results were assessed against manual scar-tissue tracing using one-patient-out cross validation. Results: Protocol 2 outperformed Protocol 1 significantly (p value < 0.05), with median sensitivity and Dice similarity coefficient equal to 88.07% [inter-quartile range (IQR) 18.84%] and 71.25% (IQR 31.82%), respectively. Discussion: Both segmentation protocols were able to detect scar tissues in the CMR-LGE images but higher performance was achieved when limiting the search area to the myocardial region. The findings of this paper represent an encouraging starting point for the use of FCNNs for the segmentation of nonviable scar tissue from CMR-LGE images

Automated Scar Segmentation From Cardiac Magnetic Resonance-Late Gadolinium Enhancement Images Using a Deep-Learning Approach

Aim. The presence of myocardial scar is a strong predictor of ventricular remodeling, cardiac dysfunction and mortality. Our aim was to assess quantitatively the presence of scar tissue from cardiac-magnetic-resonance (CMR) with late-Gadolinium-enhancement (LGE) images using a deep-learning (DL) approach. Methods. Scar segmentation was performed automatically with a DL approach based on ENet, a deep fully-convolutional neural network (FCNN). We investigated three different ENet configurations. The first configuration (C1) exploited ENet to retrieve directly scar segmentation from the CMR-LGE images. The second (C2) and third (C3) configurations performed scar segmentation in the myocardial region, which was previously obtained in a manual or automatic way with a state-of-the-art DL method, respectively. Results. When tested on 250 CMR-LGE images from 30 patients, the best-performing configuration (C2) achieved 97% median accuracy (inter-quartile (IQR) range = 4%) and 71% median Dice similarity coefficient (IQR = 32%). Conclusions. DL approaches using ENet are promising in automatically segmenting scars in CMR-LGE images, achieving higher performance when limiting the search area to the manually-defined myocardial region