7 research outputs found
Comparative Metabolome and Transcriptome Analyses of Susceptible Asparagus officinalis and Resistant Wild A. kiusianus Reveal Insights into Stem Blight Disease Resistance.
Difference between Male and Female Plant in Growth of One-year-old Asparagus, Yield and Quality in Forcing Culture
Effects of various sucrose concentration and ancymidol on shoot elongation and water status of asparagus in vitro
Application of PCR-Denaturing-Gradient Gel Electrophoresis (DGGE) Method to Examine Microbial Community Structure in Asparagus Fields with Growth Inhibition due to Continuous Cropping
Effects of various sucrose concentration and ancymidol on shoot elongation and water status of asparagus in vitro
<i>Pratylenchus penetrans</i> population dynamics and cabbage growth under the continuous application of sawdust cattle manure compost for year-round cabbage cropping
Differential gene expression analysis and SNP/InDel marker discovery in resistant wild Asparagus kiusianus and susceptible A. officinalis in response to Phomopsis asparagi infection
This data article reports de novo transcriptome analysis of resistant wild Asparagus kiusianus and susceptible A. officinalis plants 24 and 48 h post-inoculation (24 and 48 hpi) with Phomopsis asparagi. Differential gene expression (DGE) analysis demonstrated that several genes involved in secondary metabolites and plant-pathogen interactions are up-regulated in resistant wild A. kiusianus relative to susceptible A. officinalis. The assembled contig sequences generated in this study were used to search single nucleotide polymorphism (SNP) and insertion/deletion (InDel) distribution in A. kiusianus and A. officinalis plants. SNP and InDel data developed from this transcriptome analysis will be used to generate a high-density linkage map to facilitate further development of molecular marker-assisted selection in A. officinalis. Keywords: RNA-Seq, Transcriptome, Asparagus, Single nucleotide polymorphism, Insertion/deletio