Genome-Wide Analysis of Gene Expression during Early Arabidopsis Flower Development

Detailed information about stage-specific changes in gene expression is crucial for the understanding of the gene regulatory networks underlying development. Here, we describe the global gene expression dynamics during early flower development, a key process in the life cycle of a plant, during which floral patterning and the specification of floral organs is established. We used a novel floral induction system in Arabidopsis, which allows the isolation of a large number of synchronized floral buds, in conjunction with whole-genome microarray analysis to identify genes with differential expression at distinct stages of flower development. We found that the onset of flower formation is characterized by a massive downregulation of genes in incipient floral primordia, which is followed by a predominance of gene activation during the differentiation of floral organs. Among the genes we identified as differentially expressed in the experiment, we detected a significant enrichment of closely related members of gene families. The expression profiles of these related genes were often highly correlated, indicating similar temporal expression patterns. Moreover, we found that the majority of these genes is specifically up-regulated during certain developmental stages. Because co-expressed members of gene families in Arabidopsis frequently act in a redundant manner, these results suggest a high degree of functional redundancy during early flower development, but also that its extent may vary in a stage-specific manner

Statistical stability and limit laws for Rovella maps

We consider the family of one-dimensional maps arising from the contracting Lorenz attractors studied by Rovella. Benedicks-Carleson techniques were used by Rovella to prove that there is a one-parameter family of maps whose derivatives along their critical orbits increase exponentially fast and the critical orbits have slow recurrent to the critical point. Metzger proved that these maps have a unique absolutely continuous ergodic invariant probability measure (SRB measure). Here we use the technique developed by Freitas and show that the tail set (the set of points which at a given time have not achieved either the exponential growth of derivative or the slow recurrence) decays exponentially fast as time passes. As a consequence, we obtain the continuous variation of the densities of the SRB measures and associated metric entropies with the parameter. Our main result also implies some statistical properties for these maps.Comment: 1 figur

REXIB: Remote Experiments Interface Builder

Remote Experimentation is an educational resource that allows teachers to strengthen the practical contents of science & engineering courses. However, building up the interfaces to remote experiments is not a trivial task. Although teachers normally master the practical contents addressed by a particular remote experiment they usually lack the programming skills required to quickly build up the corresponding web interface. This paper describes the automatic generation of experiment interfaces through a web-accessible Java application. The application displays a list of existent modules and once the requested modules have been selected, it generates the code that enables the browser to display the experiment interface. The tools main advantage is enabling non-tech teachers to create their own remote experiments

2H-Azirines as electrophiles

2H-Azirines have shown an unusual potential to synthesise aziridines and other types of compounds. Many functionalized aziridines can be produced by addition of O-, S-,N-, C-nucleophiles and hydride to 2H-azirines. This review is designed to give an overview of the reactivity of 2H-azirines as electrophiles along the years and their usefulness in the synthesisof important families of compounds

Diels-alder cycloaddition of 2-azadienes to methyl 2-(2,6-dichlorophenyl)-2H-azirine-3-carboxylate in the synthesis of methyl 4-oxo-1,3-diazabicyclo[4.1.0]heptane-6-carboxylates

A number of fused 4-oxo-1,3-diazabicyclo[4.1.0]heptane-6-carboxylates, a new type of compound, have been obtained by Diels-Alder cycloaddition between nucleophilic 2-azadienes and an electrophilic 2H-azirine. The reactions are completely endo- and regioselective, the azirine being added by its less hindered face to the diene. There are two isomers 7 and 8 formed from dienes 1 due either to isomerization of the cycloadducts 7 and 8 or by isomerization of the C=N bond of the diene during the reaction. The isomer 10 is formed from diene 2e, and a single diastereoisomer structure 4a-i is formed from dienes 11. Some pyrimidones 8a,7c/8c, 7e, 10, 11d have been hydrolyzed leading to functionalised aziridines 12, 13 and 15.Fundação para a Ciência e Tecnologia - POCTI/32723/QUI/2000. FEDER

Cycloaddition of methyl 2-(2,6-dichorophenyl)-2H-azirine-3-carboxylate to electron rich 2-azadienes

Tert-Butyldimethylsililoxy-2-aza-1,3-butadienes react with 2H-azirine 3 leading to Diels-Alder cycloadducts in moderate yields. The reactions are endo- and regio- selective with the azirine being added by its less hindered face. There is only one product in the case of 1b, 4b. There are two isomers (4 and 5) from 1a, 1c and 1d. A different result was obtained with the diene 1e. Diene 1e formed products 4e and 8. Some of compounds 4 and 5 have been hydrolysed leading to functionalized aziridines 7. Compound 8 gave aziridine 9.Fundação para a Ciência e Tecnologia - POCTI/32723/QUI/2000. FEDER

Highly diastereoselective synthesis of aza-diels-alder reaction of danishefsky diene wiht glyoxylate imines

Aza-Diels-Alder reaction is an exceptionally powerful synthetic method for the construction of six-membered nitrogen-heterocycles.[1-3] The reaction of Danishefsky's diene 1 with iminoacetates 2 (imines of glyoxylates) provides a convenient protocol for the synthesis of pipiridone adducts 3 (Scheme 1). In this context, we have performed the synthesis of various cycloadducts, precursors of a wide variety of chiral piperidines with potential use as non-natural amino acids or as precursors of biologically active compounds, including iminosugars (glycomimetics)

Thermal Control of the Intrinsic Magnetic Damping in a Ferromagnetic Metal

We report experiments on the control of intrinsic magnetic damping by thermal torque effects produced by the spin Seebeck effect and the anomalous Nernst effect in a thin layer of a ferromagnetic metal (Permalloy (Py), ). Damping is measured in ferromagnetic resonance (FMR) experiments on a sample excited by microwave radiation and detected by the dc-voltage-generated spin rectification and magnonic charge pumping in the Py film. Application of a temperature gradient in the longitudinal configuration increases or decreases the dc-voltage line width, depending on the sign of the thermal gradient, demonstrating that the magnetic damping in Py is controlled by currents generated by thermal effects. The absolute values of the line-width changes in Py may reach 1 order of magnitude larger than in the ferrimagnetic insulator yttrium iron garnet. The large change in magnetic damping is interpreted as a superposition of different phenomena in the same metallic ferromagnet

Highly diastereoselective synthesis of 2-azabicyclo[2.2.1]hept-5-ene derivatives : bronsted acid catalized aza-diels-alder reaction between cyclopentadiene and imino-acetates with two chiral auxiliaries

The cycloaddition between protonated glyoxylate imines possessing two chiral auxiliaries, N-(S)- or N-(R)-1-phenylethyl and (-)-8-phenylmenthyl or (+)-8- phenylneomenthyl, and cyclopentadiene is described. The absolute configuration of all adducts formed was unequivocally assigned through NMR, specific optical rotation and X-ray data of appropriated derivatives. Experimental results confirm the highly exoselectivity for these aza-Diels–Alder reactions, single adducts being obtained from combinations of (8PM)-(R-PEA) and (8PNM)-(S-PEA).Thanks are due to Fundacao para a Ciencia e Tecnologia (FCT) for financial support given to Faculdade de Ciencias do Porto (project PTDC/QUI/67407/2006) and for financial support through the re-equipment program REDE/1517/RMN/2005