40 research outputs found

    XDecompo: eXplainable Decomposition Approach in Convolutional Neural Networks for Tumour Image Classification

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    Of the various tumour types, colorectal cancer and brain tumours are still considered among the most serious and deadly diseases in the world. Therefore, many researchers are interested in improving the accuracy and reliability of diagnostic medical machine learning models. In computer-aided diagnosis, self-supervised learning has been proven to be an effective solution when dealing with datasets with insufficient data annotations. However, medical image datasets often suffer from data irregularities, making the recognition task even more challenging. The class decomposition approach has provided a robust solution to such a challenging problem by simplifying the learning of class boundaries of a dataset. In this paper, we propose a robust self-supervised model, called XDecompo, to improve the transferability of features from the pretext task to the downstream task. XDecompo has been designed based on an affinity propagation-based class decomposition to effectively encourage learning of the class boundaries in the downstream task. XDecompo has an explainable component to highlight important pixels that contribute to classification and explain the effect of class decomposition on improving the speciality of extracted features. We also explore the generalisability of XDecompo in handling different medical datasets, such as histopathology for colorectal cancer and brain tumour images. The quantitative results demonstrate the robustness of XDecompo with high accuracy of 96.16% and 94.30% for CRC and brain tumour images, respectively. XDecompo has demonstrated its generalization capability and achieved high classification accuracy (both quantitatively and qualitatively) in different medical image datasets, compared with other models. Moreover, a post hoc explainable method has been used to validate the feature transferability, demonstrating highly accurate feature representations

    DeTraC: Transfer Learning of Class Decomposed Medical Images in Convolutional Neural Networks

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    Due to the high availability of large-scale annotated image datasets, paramount progress has been made in deep convolutional neural networks (CNNs) for image classification tasks. CNNs enable learning highly representative and hierarchical local image features directly from data. However, the availability of annotated data, especially in the medical imaging domain, remains the biggest challenge in the field. Transfer learning can provide a promising and effective solution by transferring knowledge from generic image recognition tasks to the medical image classification. However, due to irregularities in the dataset distribution, transfer learning usually fails to provide a robust solution. Class decomposition facilitates easier to learn class boundaries of a dataset, and consequently can deal with any irregularities in the data distribution. Motivated by this challenging problem, the paper presents Decompose, Transfer, and Compose (DeTraC) approach, a novel CNN architecture based on class decomposition to improve the performance of medical image classification using transfer learning and class decomposition approach. DeTraC enables learning at the subclass level that can be more separable with a prospect to faster convergence.We validated our proposed approach with three different cohorts of chest X-ray images, histological images of human colorectal cancer, and digital mammograms. We compared DeTraC with the state-of-the-art CNN models to demonstrate its high performance in terms of accuracy, sensitivity, and specificity

    Classification of COVID-19 in chest X-ray images using DeTraC deep convolutional neural network

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    Chest X-ray is the first imaging technique that plays an important role in the diagnosis of COVID-19 disease. Due to the high availability of large-scale annotated image datasets, great success has been achieved using convolutional neural networks (CNN s) for image recognition and classification. However, due to the limited availability of annotated medical images, the classification of medical images remains the biggest challenge in medical diagnosis. Thanks to transfer learning, an effective mechanism that can provide a promising solution by transferring knowledge from generic object recognition tasks to domain-specific tasks. In this paper, we validate and a deep CNN, called Decompose, Transfer, and Compose (DeTraC), for the classification of COVID-19 chest X-ray images. DeTraC can deal with any irregularities in the image dataset by investigating its class boundaries using a class decomposition mechanism. The experimental results showed the capability of DeTraC in the detection of COVID-19 cases from a comprehensive image dataset collected from several hospitals around the world. High accuracy of 93.1% (with a sensitivity of 100%) was achieved by DeTraC in the detection of COVID-19 X-ray images from normal, and severe acute respiratory syndrome cases

    A Novel Autonomous Perceptron Model for Pattern Classification Applications

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    Pattern classification represents a challenging problem in machine learning and data science research domains, especially when there is a limited availability of training samples. In recent years, artificial neural network (ANN) algorithms have demonstrated astonishing performance when compared to traditional generative and discriminative classification algorithms. However, due to the complexity of classical ANN architectures, ANNs are sometimes incapable of providing efficient solutions when addressing complex distribution problems. Motivated by the mathematical definition of a quantum bit (qubit), we propose a novel autonomous perceptron model (APM) that can solve the problem of the architecture complexity of traditional ANNs. APM is a nonlinear classification model that has a simple and fixed architecture inspired by the computational superposition power of the qubit. The proposed perceptron is able to construct the activation operators autonomously after a limited number of iterations. Several experiments using various datasets are conducted, where all the empirical results show the superiority of the proposed model as a classifier in terms of accuracy and computational time when it is compared with baseline classification models

    4S-DT: Self-Supervised Super Sample Decomposition for Transfer Learning With Application to COVID-19 Detection

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    Due to the high availability of large-scale annotated image datasets, knowledge transfer from pretrained models showed outstanding performance in medical image classification. However, building a robust image classification model for datasets with data irregularity or imbalanced classes can be a very challenging task, especially in the medical imaging domain. In this article, we propose a novel deep convolutional neural network,which we called self-supervised super sample decomposition for transfer learning (4S-DT) model. The 4S-DT encourages a coarse-to-fine transfer learning from large-scale image recognition tasks to a specific chest X-ray image classification task using a generic self-supervised sample decomposition approach. Our main contribution is a novel self-supervised learning mechanism guided by a super sample decomposition of unlabeled chest X-ray images. 4S-DT helps in improving the robustness of knowledge transformation via a downstream learning strategy with a class decomposition (CD) layer to simplify the local structure of the data. The 4S-DT can deal with any irregularities in the image dataset by investigating its class boundaries using a downstream CD mechanism. We used 50 000 unlabeled chest X-ray images to achieve our coarse-to-fine transfer learning with an application to COVID-19 detection, as an exemplar. The 4S-DT has achieved a high accuracy of 99.8% on the larger of the two datasets used in the experimental study and an accuracy of 97.54% on the smaller dataset, which was enriched by augmented images, out of which all real COVID-19 cases were detected
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