Topological persistence and dynamical heterogeneities near jamming

We introduce topological methods for quantifying spatially heterogeneous dynamics, and use these tools to analyze particle-tracking data for a quasi-two-dimensional granular system of air-fluidized beads on approach to jamming. In particular we define two overlap order parameters, which quantify the correlation between particle configurations at different times, based on a Voronoi construction and the persistence in the resulting cells and nearest neighbors. Temporal fluctuations in the decay of the persistent area and bond order parameters define two alternative dynamic four-point susceptibilities, XA(t) and XB(t), well-suited for characterizing spatially-heterogeneous dynamics. These are analogous to the standard four-point dynamic susceptibility X4(l,t), but where the space-dependence is fixed uniquely by topology rather than by discretionary choice of cutoff function. While these three susceptibilities yield characteristic time scales that are somewhat different, they give domain sizes for the dynamical heterogeneities that are in good agreement and that diverge on approach to jamming

The partition of energy for air-fluidized grains

The dynamics of one and two identical spheres rolling in a nearly-levitating upflow of air obey the Langevin Equation and the Fluctuation-Dissipation Relation [Ojha et al. Nature 427, 521 (2004) and Phys. Rev. E 71, 01631 (2005)]. To probe the range of validity of this statistical mechanical description, we perturb the original experiments in four ways. First, we break the circular symmetry of the confining potential by using a stadium-shaped trap, and find that the velocity distributions remain circularly symmetric. Second, we fluidize multiple spheres of different density, and find that all have the same effective temperature. Third, we fluidize two spheres of different size, and find that the thermal analogy progressively fails according to the size ratio. Fourth, we fluidize individual grains of aspherical shape, and find that the applicability of statistical mechanics depends on whether or not the grain chatters along its length, in the direction of airflow.Comment: experimen

Sufficient conditions for the existence of Zeno behavior in a class of nonlinear hybrid systems via constant approximations

The existence of Zeno behavior in hybrid systems is related to a certain type of equilibria, termed Zeno equilibria, that are invariant under the discrete, but not the continuous, dynamics of a hybrid system. In analogy to the standard procedure of linearizing a vector field at an equilibrium point to determine its stability, in this paper we study the local behavior of a hybrid system near a Zeno equilibrium point by considering the value of the vector field on each domain at this point, i.e., we consider constant approximations of nonlinear hybrid systems. By means of these constant approximations, we are able to derive conditions that simultaneously imply both the existence of Zeno behavior and the local exponential stability of a Zeno equilibrium point. Moreover, since these conditions are in terms of the value of the vector field on each domain at a point, they are remarkably easy to verify

Improvement of Injera shelf life through the use of chemical preservatives

Mould spoilage is a serious problem that affects the shelf life of injera, the staple Ethiopian fermented bread. Injera is made from teff (Eragrostis tef) but other cereals may also be used in combination with teff. About two-third of Ethiopian diet consists of injera and it accounts for about two-thirds of the daily protein intake of the Ethiopian population. Injera has a high nutritional value, as it is rich in calcium and iron. Unfortunately, injera has a shelf life of only 3-4 days essentially due to mould spoilage. The use of weak organic acid as preservative is allowed in acidic foods,primarily as mould inhibitors. In this study, the effect of chemical preservatives such as benzoic acid, sodium benzoate, potassium sorbate and calcium propionate were investigated to prolong shelf life of injera. The preservatives were added immediately before baking at the concentration of 0.1% of benzoic acid, 0.1% sodium benzoate, 0.2% of potassium sorbate, 0.3% of calcium propionate and 0.2% blend of the four as recommended by Food and Drug Administration of USA. Three fungal species: Aspergillus niger, Penicillium sp and Rhizopus sp were found to be responsible for injera spoilage. Penicillium and Rhizopus were more dominant at storage temperature of between 16-200C, while Aspergillus niger was found to be more dominant at higher temperature of 25-320C. Injera samples had a pH and moisture content between 3.38- 3.45 and 62-65%, respectively. Anti-fungal activities of the preservatives investigated significantly prolonged the shelf life of injera for up to12 days. It was found out that the effectiveness of preservation was ranked as sodium benzoate>benzoic acid>potassium sorbate>blend>calcium propionate showing that benzoate and benzoic acid are the most effective. The outcome of the research has a significant implication in food security, energy utilization and a significant reduction in the amount of time used by women to produce injera

Out of the archaeologist's desk drawer: communicating archaeological data online

During archaeological field work a huge amount of data is collected, processed and elaborated for further studies and scientific publications. However, access and communication of linked data; associated tools for interrogation, analysis and sharing are often limited at the first stage of the archaeological research, mainly due to issues related to IPR. Information is often released months if not years after the fieldwork. Nowadays great deal of archaeological data is 'born digital' in the field or lab. This means databases, pictures and 3D models of finds and excavation contexts could be available for public communication and sharing. Researchers usually restrict access to their data to a small group of people. It follows that data sharing is not so widespread among archaeologists, and dissemination of research is still mostly based on traditional pre-digital means like scientific papers, journal articles and books. This project has implemented a web approach for sharing and communication purposes, exploiting mainly open source technologies which allow a high level of interactivity. The case study presented is the newly Mithraeum excavated in Ostia Antica archaeological site in the framework of the Ostia Marina Project

Growth Inhibition of Grain Spoilage Fungi by Selected Herbs and Spices Essential Oils

Natural plant extracts are promising alternatives for chemical food additives and synthetic pesticides. In this study, essential oils of selected herbs and spices were tested for their antimicrobial activities against Aspergillus flavus and Aspergillus niger, two of the most common food spoilage  microorganisms. Agar disk diffusion assay was used for screening of the most effective essential oils, agar dilution assay was used to determine Minimum Inhibitory Concentration (MIC) of the essential oils and broth dilution assay was employed to the spore germination inhibition assay. Tests were also conducted to examine the effects of the essential oils for sorghum kernel protection against the tested fungi, and the optimal  protective dosages on the sorghum grains were also determined. From the preliminary tests, essential oils of Cinnamomum zeylanicum (Cinnamon) and Thymus schimperi (thymus) were found to be the most effective. However piper nigrum (black pepper) had no effect on the test organisms. In MIC, spore germination inhibition and grain protection assay, cinnamon essential oil was found to be superior where its MIC on the isolates was found to be 0.0156% and its optimum protective dosage on the sorghum grain was 5%. It inhibited spore germination at a concentration of 3ìL/mL. The effect of thymus oil was also very much comparable to these results (no significant difference at P>0.05). Finally, it was concluded that essential oil extracts of cinnamon and thymus can be a useful source of antifungal agents for protection of grain spoilage by fungi

HIV self-testing practices among Health Care Workers: feasibility and options for accelerating HIV testing services in Ethiopia

Introduction: HIV is still an enormous global burden and it is also causing loss of huge health care workers (HCWs) on the already limited human resource capacity in health care services in Sub-Saharan Africa. Variety of methods of accelerating HIV testing is required to increase the rate of HIV testing and expand treatment services. Therefore, this study was aimed to find out the prevalence, feasibility and options of HIV self-testing practices in Ethiopia. Methods: A cross-sectional study design triangulated with qualitative method was conducted from February to May, 2012. The data was collected using a semi-structured pretested questionnaire and in-depth interview, at government and private health centers or clinics and hospitals. During the data collection all the available healthcare workers (HCWs) which encompass the internship students including: Medical, Health Officer, Nurses, Midwives and Laboratory students, and health professionals working in the selected health institutions were involved.Results: A total of 307 HCWs were included in the analysis and we found that 288(94.4%) of them were ever tested for HIV, of which majority 203 (70.5%) were tested by themselves though 244(80%) of the HCWs had motivation or interest to be tested by themselves. Generally, of the ever tested only 85(29.5%) were tested by the help of health care providers/counselors other than self. Regarding the place where the HCWs had the test, majority 136 (69.4%) tested by themselves at the health facility and the rest were tested at their home, office, market and church. The main reason stated for self-testing was the need for confidentiality for the test result, which was mentioned by 205(82%). Moreover, 35(14.0%) claims lack of time to access the ordinary counseling and testing services. Conclusion: This study depicts high rate of HIV self-testing practice among HCWs. This shows that HIV self-testing can be considered as one pillar to increase the HIV-testing services and a means for the HIV prevention and control policy, through increasing HIV testing uptake and awareness of HIV status. However, the implementation may require the role of different stakeholders and decision makers with further study to extend the options.Key words: HIV, VCT, self-test, health care workers, Ethiopi

Effective temperatures and activated dynamics for a two-dimensional air-driven granular system on two approaches to jamming

We present experiments on several distinct effective temperatures in a granular system at a sequence of increasing packing densities and at a sequence of decreasing driving rates. This includes single-grain measurements based on the mechanical energies of both the grains and an embedded oscillator, as well as a collective measurement based on the Einstein relation between diffusivity and mobility, which all probe different time scales. Remarkably, all effective temperatures agree. Furthermore, mobility data along the two trajectories collapse when plotted vs effective temperature and exhibit an Arrhenius form with the same energy barrier as the microscopic relaxation time

Avalanche statistics and time-resolved grain dynamics for a driven heap

We probe the dynamics of intermittent avalanches caused by steady addition of grains to a quasi-two dimensional heap. To characterize the time-dependent average avalanche flow speed v(t), we image the top free surface. To characterize the grain fluctuation speed dv(t), we use Speckle-Visibility Spectroscopy. During an avalanche, we find that the fluctuation speed is approximately one-tenth the average flow speed, and that these speeds are largest near the beginning of an event. We also find that the distribution of event durations is peaked, and that event sizes are correlated with the time interval since the end of the previous event. At high rates of grain addition, where successive avalanches merge into smooth continuous flow, the relationship between average and fluctuation speeds changes to dv Sqrt[v]

A priori detection of Zeno behavior in communication networks modeled as hybrid systems

In this paper, we show that the sufficient conditions for the existence of Zeno behavior in hybrid systems derived in (A. Abate et al., 2005) correctly predict such executions in a modeling instance of the fluid-flow approximation of the TCP-like protocol for wireless communication networks