Robust chaos generation by a perceptron

The properties of time series generated by a perceptron with monotonic and non-monotonic transfer function, where the next input vector is determined from past output values, are examined. Analysis of the parameter space reveals the following main finding: a perceptron with a monotonic function can produce fragile chaos only whereas a non-monotonic function can generate robust chaos as well. For non-monotonic functions, the dimension of the attractor can be controlled monotonically by tuning a natural parameter in the model.Comment: 7 pages, 5 figures (reduced quality), accepted for publication in EuroPhysics Letter

Mean First Passage Time in Periodic Attractors

The properties of the mean first passage time in a system characterized by multiple periodic attractors are studied. Using a transformation from a high dimensional space to 1D, the problem is reduced to a stochastic process along the path from the fixed point attractor to a saddle point located between two neighboring attractors. It is found that the time to switch between attractors depends on the effective size of the attractors, $\tau$, the noise, $\epsilon$, and the potential difference between the attractor and an adjacent saddle point as: $~T = {c \over \tau} \exp({\tau \over \epsilon} \Delta {\cal{U}})~$; the ratio between the sizes of the two attractors affects $\Delta {\cal{U}}$. The result is obtained analytically for small $\tau$ and confirmed by numerical simulations. Possible implications that may arise from the model and results are discussed.Comment: 14 pages, 3 figures, submitted to journal of physics

Learning and generation of long-range correlated sequences

We study the capability to learn and to generate long-range, power-law correlated sequences by a fully connected asymmetric network. The focus is set on the ability of neural networks to extract statistical features from a sequence. We demonstrate that the average power-law behavior is learnable, namely, the sequence generated by the trained network obeys the same statistical behavior. The interplay between a correlated weight matrix and the sequence generated by such a network is explored. A weight matrix with a power-law correlation function along the vertical direction, gives rise to a sequence with a similar statistical behavior.Comment: 5 pages, 3 figures, accepted for publication in Physical Review

On the Brauer groups of symmetries of abelian Dijkgraaf-Witten theories

Symmetries of three-dimensional topological field theories are naturally defined in terms of invertible topological surface defects. Symmetry groups are thus Brauer-Picard groups. We present a gauge theoretic realization of all symmetries of abelian Dijkgraaf-Witten theories. The symmetry group for a Dijkgraaf-Witten theory with gauge group a finite abelian group $A$, and with vanishing 3-cocycle, is generated by group automorphisms of $A$, by automorphisms of the trivial Chern-Simons 2-gerbe on the stack of $A$-bundles, and by partial e-m dualities. We show that transmission functors naturally extracted from extended topological field theories with surface defects give a physical realization of the bijection between invertible bimodule categories of a fusion category and braided auto-equivalences of its Drinfeld center. The latter provides the labels for bulk Wilson lines; it follows that a symmetry is completely characterized by its action on bulk Wilson lines.Comment: 21 pages, 9 figures. v2: Minor changes, typos corrected and references added. v3: Typos correcte

The Forces Applied by Cilia Depend Linearly on Their Frequency Due to Constant Geometry of the Effective Stroke

AbstractMucus propelling cilia are excitable by many stimulants, and have been shown to increase their beating frequency up to threefold, by physiological extracellular stimulants, such as adenosine-triphosphate, acetylcholine, and others. This is thought to represent the evolutionary adaptation of mucociliary systems to the need of rapid and efficient cleansing the airways of foreign particles. However, the mucus transport velocity depends not only on the beat frequency of the cilia, but on their beat pattern as well, especially in the case of mucus bearing cilia that beat in a complex, three-dimensional fashion. In this study, we directly measured the force applied by live ciliary tissues with an atomic force microscope, and found that it increases linearly with the beating frequency. This implies that the arc swept by the cilia during their effective stroke remains unchanged during frequency increase, thus leading to a linear dependence of transport velocity on the beat frequency. Combining the atomic force microscope measurements with optical measurements, we have indications that the recovery stroke is performed on a less inclined plane, leading to an effective shortening of the overall path traveled by the cilia tip during this nontransporting phase of their beat pattern. This effect is observed to be independent of the type of stimulant (temperature or chemical), chemical (adenosine-triphosphate or acetylcholine), or concentration (1μM–100μM), indicating that this behavior may result from internal details of the cilium mechanical structure

Learning and predicting time series by neural networks

Artificial neural networks which are trained on a time series are supposed to achieve two abilities: firstly to predict the series many time steps ahead and secondly to learn the rule which has produced the series. It is shown that prediction and learning are not necessarily related to each other. Chaotic sequences can be learned but not predicted while quasiperiodic sequences can be well predicted but not learned.Comment: 5 page

Model of ionic currents through microtubule nanopores and the lumen

It has been suggested that microtubules and other cytoskeletal filaments may act as electrical transmission lines. An electrical circuit model of the microtubule is constructed incorporating features of its cylindrical structure with nanopores in its walls. This model is used to study how ionic conductance along the lumen is affected by flux through the nanopores when an external potential is applied across its two ends. Based on the results of Brownian dynamics simulations, the nanopores were found to have asymmetric inner and outer conductances, manifested as nonlinear IV curves. Our simulations indicate that a combination of this asymmetry and an internal voltage source arising from the motion of the C-terminal tails causes a net current to be pumped across the microtubule wall and propagate down the microtubule through the lumen. This effect is demonstrated to enhance and add directly to the longitudinal current through the lumen resulting from an external voltage source, and could be significant in amplifying low-intensity endogenous currents within the cellular environment or as a nano-bioelectronic device.Comment: 43 pages, 6 figures, revised versio