77 research outputs found
New insights into pedestrian flow through bottlenecks
Capacity estimation is an important tool for the design and dimensioning of
pedestrian facilities. The literature contains different procedures and
specifications which show considerable differences with respect to the
estimated flow values. Moreover do new experimental data indicate a stepwise
growing of the capacity with the width and thus challenge the validity of the
specific flow concept. To resolve these differences we have studied
experimentally the unidirectional pedestrian flow through bottlenecks under
laboratory conditions. The time development of quantities like individual
velocities, density and individual time gaps in bottlenecks of different width
is presented. The data show a linear growth of the flow with the width. The
comparison of the results with experimental data of other authors indicates
that the basic assumption of the capacity estimation for bottlenecks has to be
revised. In contradiction with most planning guidelines our main result is,
that a jam occurs even if the incoming flow does not overstep the capacity
defined by the maximum of the flow according to the fundamental diagram.Comment: Traffic flow, pedestrian traffic, crowd dynamics, capacity of
bottlenecks (16 pages, 8 figures); (+ 3 new figures and minor revisions
Effects of Boundary Conditions on Single-File Pedestrian Flow
In this paper we investigate effects of boundary conditions on one
dimensional pedestrian flow which involves purely longitudinal interactions.
Qualitatively, stop-and-go waves are observed under closed boundary condition
and dissolve when the boundary is open. To get more detailed information the
fundamental diagrams of the open and closed systems are compared using
Voronoi-based measurement method. Higher maximal specific flow is observed from
the pedestrian movement at open boundary condition
Generalized Centrifugal Force Model for Pedestrian Dynamics
A spatially continuous force-based model for simulating pedestrian dynamics
is introduced which includes an elliptical volume exclusion of pedestrians. We
discuss the phenomena of oscillations and overlapping which occur for certain
choices of the forces. The main intention of this work is the quantitative
description of pedestrian movement in several geometries. Measurements of the
fundamental diagram in narrow and wide corridors are performed. The results of
the proposed model show good agreement with empirical data obtained in
controlled experiments.Comment: 10 pages, 14 figures, accepted for publication as a Regular Article
in Physical Review E. This version contains minor change
Characterizing correlations of flow oscillations at bottlenecks
"Oscillations" occur in quite different kinds of many-particle-systems when
two groups of particles with different directions of motion meet or intersect
at a certain spot. We present a model of pedestrian motion that is able to
reproduce oscillations with different characteristics. The Wald-Wolfowitz test
and Gillis' correlated random walk are shown to hold observables that can be
used to characterize different kinds of oscillations
The Fundamental Diagram of Pedestrian Movement Revisited
The empirical relation between density and velocity of pedestrian movement is
not completely analyzed, particularly with regard to the `microscopic' causes
which determine the relation at medium and high densities. The simplest system
for the investigation of this dependency is the normal movement of pedestrians
along a line (single-file movement). This article presents experimental results
for this system under laboratory conditions and discusses the following
observations: The data show a linear relation between the velocity and the
inverse of the density, which can be regarded as the required length of one
pedestrian to move. Furthermore we compare the results for the single-file
movement with literature data for the movement in a plane. This comparison
shows an unexpected conformance between the fundamental diagrams, indicating
that lateral interference has negligible influence on the velocity-density
relation at the density domain . In addition we test a
procedure for automatic recording of pedestrian flow characteristics. We
present preliminary results on measurement range and accuracy of this method.Comment: 13 pages, 9 figure
Enhanced empirical data for the fundamental diagram and the flow through bottlenecks
In recent years, several approaches for modelling pedestrian dynamics have
been proposed and applied e.g. for design of egress routes. However, so far not
much attention has been paid to their 'quantitative' validation. This
unsatisfactory situation belongs amongst others on the uncertain and
contradictory experimental data base. The fundamental diagram, i.e. the
density-dependence of the flow or velocity, is probably the most important
relation as it connects the basic parameter to describe the dynamic of crowds.
But specifications in different handbooks as well as experimental measurements
differ considerably. The same is true for the bottleneck flow. After a
comprehensive review of the experimental data base we give an survey of a
research project, including experiments with up to 250 persons performed under
well controlled laboratory conditions. The trajectories of each person are
measured in high precision to analyze the fundamental diagram and the flow
through bottlenecks. The trajectories allow to study how the way of measurement
influences the resulting relations. Surprisingly we found large deviation
amongst the methods. These may be responsible for the deviation in the
literature mentioned above. The results are of particular importance for the
comparison of experimental data gained in different contexts and for the
validation of models.Comment: A contribution to: Pedestrian and Evacuation Dynamics 2008 (Springer)
12 pages, 7 figure
A glossary for research on human crowd dynamics
This article presents a glossary of terms that are frequently used in research on human crowds. This topic is inherently multidisciplinary as it includes work in and across computer science, engineering, mathematics, physics, psychology and social science, for example. We do not view the glossary presented here as a collection of finalised and formal definitions. Instead, we suggest it is a snapshot of current views and the starting point of an ongoing process that we hope will be useful in providing some guidance on the use of terminology to develop a mutual understanding across disciplines.
The glossary was developed collaboratively during a multidisciplinary meeting. We deliberately allow several definitions of terms, to reflect the confluence of disciplines in the field. This also reflects the fact not all contributors necessarily agree with all definitions in this glossary
Sporadic Creutzfeldt-Jakob disease VM1: phenotypic and molecular characterization of a novel subtype of human prion disease
The methionine (M)-valine (V) polymorphic codon 129 of the prion protein gene (PRNP) plays a central role in both susceptibility and phenotypic expression of sporadic Creutzfeldt-Jakob diseases (sCJD). Experimental transmissions of sCJD in humanized transgenic mice led to the isolation of five prion strains, named M1, M2C, M2T, V2, and V1, based on two major conformations of the pathological prion protein (PrPSc, type 1 and type 2), and the codon 129 genotype determining susceptibility and propagation efficiency. While the most frequent sCJD strains have been described in codon 129 homozygosis (MM1, MM2C, VV2) and heterozygosis (MV1, MV2K, and MV2C), the V1 strain has only been found in patients carrying VV. We identified six sCJD cases, 4 in Catalonia and 2 in Italy, carrying MV at PRNP codon 129 in combination with PrPSc type 1 and a new clinical and neuropathological profile reminiscent of the VV1 sCJD subtype rather than typical MM1/MV1. All patients had a relatively long duration (mean of 20.5 vs. 3.5 months of MM1/MV1 patients) and lacked electroencephalographic periodic sharp-wave complexes at diagnosis. Distinctive histopathological features included the spongiform change with vacuoles of larger size than those seen in sCJD MM1/MV1, the lesion profile with prominent cortical and striatal involvement, and the pattern of PrPSc deposition characterized by a dissociation between florid spongiform change and mild synaptic deposits associated with coarse, patch-like deposits in the cerebellar molecular layer. Western blot analysis of brain homogenates revealed a PrPSc type 1 profile with physicochemical properties reminiscent of the type 1 protein linked to the VV1 sCJD subtype. In summary, we have identified a new subtype of sCJD with distinctive clinicopathological features significantly overlapping with those of the VV1 subtype, possibly representing the missing evidence of V1 sCJD strain propagation in the 129MV host genotype
CMASA: an accurate algorithm for detecting local protein structural similarity and its application to enzyme catalytic site annotation
<p>Abstract</p> <p>Background</p> <p>The rapid development of structural genomics has resulted in many "unknown function" proteins being deposited in Protein Data Bank (PDB), thus, the functional prediction of these proteins has become a challenge for structural bioinformatics. Several sequence-based and structure-based methods have been developed to predict protein function, but these methods need to be improved further, such as, enhancing the accuracy, sensitivity, and the computational speed. Here, an accurate algorithm, the CMASA (Contact MAtrix based local Structural Alignment algorithm), has been developed to predict unknown functions of proteins based on the local protein structural similarity. This algorithm has been evaluated by building a test set including 164 enzyme families, and also been compared to other methods.</p> <p>Results</p> <p>The evaluation of CMASA shows that the CMASA is highly accurate (0.96), sensitive (0.86), and fast enough to be used in the large-scale functional annotation. Comparing to both sequence-based and global structure-based methods, not only the CMASA can find remote homologous proteins, but also can find the active site convergence. Comparing to other local structure comparison-based methods, the CMASA can obtain the better performance than both FFF (a method using geometry to predict protein function) and SPASM (a local structure alignment method); and the CMASA is more sensitive than PINTS and is more accurate than JESS (both are local structure alignment methods). The CMASA was applied to annotate the enzyme catalytic sites of the non-redundant PDB, and at least 166 putative catalytic sites have been suggested, these sites can not be observed by the Catalytic Site Atlas (CSA).</p> <p>Conclusions</p> <p>The CMASA is an accurate algorithm for detecting local protein structural similarity, and it holds several advantages in predicting enzyme active sites. The CMASA can be used in large-scale enzyme active site annotation. The CMASA can be available by the mail-based server (<url>http://159.226.149.45/other1/CMASA/CMASA.htm</url>).</p
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