1,788 research outputs found
Entropy, Fluctuations, and Disordered Proteins
Entropy should directly reflect the extent of disorder in proteins. By clustering structurally related proteins and studying the multiple-sequence-alignment of the sequences of these clusters, we were able to link between sequence, structure, and disorder information. We introduced several parameters as measures of fluctuations at a given MSA site and used these as representative of the sequence and structure entropy at that site. In general, we found a tendency for negative correlations between disorder and structure, and significant positive correlations between disorder and the fluctuations in the system. We also found evidence for residue-type conservation for those residues proximate to potentially disordered sites. Mutation at the disorder site itself appear to be allowed. In addition, we found positive correlation for disorder and accessible surface area, validating that disordered residues occur in exposed regions of proteins. Finally, we also found that fluctuations in the dihedral angles at the original mutated residue and disorder are positively correlated while dihedral angle fluctuations in spatially proximal residues are negatively correlated with disorder. Our results seem to indicate permissible variability in the disordered site, but greater rigidity in the parts of the protein with which the disordered site interacts. This is another indication that disordered residues are involved in protein function
Chandra Observations of the Optically Dark GRB030528
The X-ray-rich GRB030528 was detected by the HETE satellite and its
localization was rapidly disseminated. However, early optical observations
failed to detect a counterpart source. In a 2-epoch ToO observation with
Chandra, we discovered a fading X-ray source likely counterpart to GRB030528.
The source brightness was typical of X-ray afterglows observed at similar
epochs. Other observers detected an IR source at a location consistent with the
X-ray source. The X-ray spectrum is not consistent with a large absorbing
column.Comment: 4 pages, 1 figures, to appear in Santa Fe GRB Conference Proceedings,
200
Previously Claimed(/Unclaimed) X-ray Emission Lines in High Resolution Afterglow Spectra
We review the significance determination for emission lines in the Chandra
HETGS spectrum for GRB020813, and we report on a search for additional lines in
high resolution Chandra spectra. No previously unclaimed features are found. We
also discuss the significance of lines sets reportedly discovered using XMM
data for GRB011211 and GRB030227. We find that these features are likely of
modest, though not negligible, significance.Comment: 4 pages, 1 figures, to appear in Santa Fe GRB Conference Proceedings,
200
Optical and X-ray Observations of the Afterglow to XRF030723
The X-ray-flash XRF030723 was detected by the HETE satellite and rapidly
disseminated, allowing for an optical transient to be detected ~1 day after the
burst. We discuss observations in the optical with Magellan, which confirmed
the fade of the optical transient. In a 2-epoch ToO observation with Chandra,
we discovered a fading X-ray source spatially coincident with the optical
transient. We present spectral fits to the X-ray data. We also discuss the
possibility that the source underwent a rebrightening in the X-rays, as was
observed in the optical. We find that the significance of a possible
rebrightening is very low (~1 sigma).Comment: 4 pages, 2 figures, to appear in Santa Fe GRB Conference Proceedings,
200
A Pilot Survey of the Integration of Technology into Counseling Practice
A random sample of 218 American Counseling Association members responded to a survey related to the integration of technology into the field of counseling pertaining to perceptions of possible barriers and benefits to providing online counseling. Results indicate that 11% of respondents currently provide some type of online counseling and that less than 20% of respondents would consider providing online counseling. Respondents identified both potential barriers and benefits of online counseling indicating that while counselors can recognize benefits to online counseling, they are still wary of potential challenges. Implications for the counseling field and future research directions are discussed
Seasonal changes in brain serotonin transporter binding in short 5-HTTLPR-allele carriers but not in long-allele homozygotes
Several findings suggest seasonal variations in the serotonin (5-HT) system. We sought evidence for seasonal variation in the serotonin transporter (5-HTT). We found that length of daylight time in minutes correlates negatively with 5-HTT binding in the putamen and the caudate, with a similar tendency in the thalamus, but no such association in the midbrain. In the putamen, an anatomical region with a dense serotonin innervation that is implicated in processing of aversive stimuli, we found a significant gene*daylight effect with a negative correlation between the 5-HTT binding and daylight time in carriers of the short 5-HTTLPR allele, but not in carriers of the long allele. The neurobiological endophenotype identified here directly links activation studies, showing responses on the neural circuit level, with dynamic changes in transporter expression measured in vivo
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