28 research outputs found
๋ฐฉ๊ณผํ ๋ณดํธํํ์ ๋ฐ๋ฅธ ์ด๋ฑํ๊ต ์ ํ๋ ์๋์ ์ฌ๋ฆฌ์ ๋ณต์ง๊ฐ๊ณผ ์ทจ์ ๋ชจ์ ์์ก๋ถ๋ด๊ฐ
ํ์๋
ผ๋ฌธ(์์ฌ)--์์ธ๋ํ๊ต ๋ํ์ :์๋น์์๋ํ๊ณผ ์๋๊ฐ์กฑํ์ ๊ณต,1998.Maste
Molecular and genetic analyses of a major gene for seed protein content in soybean
ํ์๋
ผ๋ฌธ (๋ฐ์ฌ)-- ์์ธ๋ํ๊ต ๋ํ์ : ์๋ฌผ์์ฐ๊ณผํ๋ถ, 2015. 2. ์ด์ํ.Seeds store nutrients for conservation and propagation of genetic materials between two generations and propagation. Seed crops are cultivated to supply those nutrients. Soybean is important seed crop since it has high protein content to maintain body and generate energy. Continuous efforts of soybean breeders are directed to improve the protein quantity by identifying linked markers and quantitative trait loci (QTL). Danbaekkong has 48% of seed protein content that its major protein QTL was founded on Chr 20, surrounding region of Satt239 and Satt496 marker interval. We selected three residual heterozygous lines heterozygous in the Satt239-Satt496 region from two recombinant inbred line populations of Sinpaldalkong 2 x Danbaekkong and Daewonkong x Danbaekkong soybean crosses to develop two sets of near isogenic lines (NILs), Prot_highSD/Prot_lowSD and Prot_highDD/Prot_lowDD with different seed protein content. The maternal parent cultivar Danbaekkong, carrying a high protein content allele, showed high seed protein content. In the genomic region harboring the introgressed Danbaekkong segment on Chr 20, we identified nucleotide differences between low- and high-protein NILs through whole genome sequencing. From the major protein QTL region, we found 66 non-synonymous single nucleotide polymorphisms and one frameshifts are overlapped between both low- and high-protein lines. After elimination of genes by expression during seed stages, we identified two genes, calcium-dependent protein kinase and exocyst subunit exo70 family protein, are more likely involved in see protein accumulation in soybean.
The gene expression changes of developing seed between Prot_lowDD and Prot_highDD represent the pattern of up-regulation of many genes in Prot_highDD at 2 week after flowering (WAF), stage of early maturation. Up-regulation pattern of storage protein genes in Prot_highDD was increasing according to seed maturation. There is a block of gene expression pattern that raised up-regulation in Prot_lowDD, consist of genes involving protein degradation. Transcription factors were highly up-regulated in Prot_highDD at 2 WAF, including major transcription factor to regulate seed development. Gene expression of carbon precursors, protein, and oil metabolic enzymes are compared between 1 and 2 WAF in Prot_lowDD to identify initial gene expression at early maturation stage. Glycine max undergoes two rounds of whole-genome duplicationthe number of genes involved in the three synthesis pathways is more than two times higher than that in Arabidopsis. Among these genes, five were conserved as single-copy genes and 44 were high copy gene families consisting of more than seven homolog members. We identified five differentially expressed genes in immature seeds aged between 1 and 2 WAF.
To find out protein expression change according to storage protein difference, additional proteomic research was hired for two NIL lines. Three enzymes, sucrose synthase, glyceraldehyde-3-phosphate dehydrogenase and ketol-acid reductoisomerase showed over two times differential expression between Prot_high lines and Prot_low lines. In this research, we developed two NIL pairs of high and low seed protein content derived from different genetic backgrounds. Genomic, trasncriptomic and proteomic analysis using these NILs indicates that development regulation from transcription factors and initial carbon metabolism is important to seed storage protein synthesis.GENERAL ABSTRACT i
CONTENTS iv
LIST OF FIGURES vii
LIST OF TABLES xi
LIST OF ABBREVIATIONS xiii
LITERATURAL REVIEWS 1
Residual heterozygous line 1
Seed storage protein 2
Next generation sequencing 4
REFERENCES 6
CHAPTER I 14
Identification of high seed protein allele effect on chromosome 20 in soybean using near isogenic lines derived from two recombinant inbred lines 14
ABSTRACT 14
INTRODUCTION 16
MATERIAL AND METHODS 19
Plant materials and NIL development 19
Phenotype evaluation 20
Genomic DNA extraction and SSR marker analysis 21
New SSR marker development and in silico transcript screening 22
RESULTS 23
Development of NILs and marker analysis 23
Phenotype evaluation for protein content 27
Genetic composition of NILs on chromosome 20 29
DISCUSSION 33
REFERENCES 37
CHAPTER II 43
Nucleotide variations in the QTL region affecting seed protein content in NILs carrying high and low seed protein alleles on chromosome 20 in soybean (Glycine max [L.] Merr.) 43
ABSTRACT 43
INTRODUCTION 45
MATERIAL AND METHODS 48
DNA extraction and SSR marker analysis 48
Analysis of sequence variations 49
RESULTS 51
Nucleotide variations in the high protein QTL region between low- and high-protein NILs 51
DISCUSSION 59
REFERENCES 66
CHAPTER III 73
Gene expression profiling for seed protein and oil synthesis during seed development in soybean 73
ABSTRACT 73
INTRODUCTION 75
MATERIAL AND METHODS 78
Plant materials and RNA extraction 78
RNA-seq analysis 79
Survey of G. max homologs of Arabidopsis thaliana genes involved in sucrose degradation and protein and oil synthesis 80
Identification of synteny blocks in the soybean genome 80
RESULTS 82
Characterization and developing soybean seeds and transcriptome analysis 82
Expression patterns of differential expressed genes related with seed storage product metabolism during seed development 89
Expression patterns of differential expressed transcription factors 95
G. max homologs of A. thaliana genes involved in synthesis of carbon precursor, protein, and oil 101
Differentially expressed genes in immature soybean seeds at 1 and 2 WAF 108
Expression patterns of paralogous soybean genes involved in the synthesis of carbon precursor, protein, and oil 115
DISCUSSION 120
REFERENCES 128
CHAPTER IV 139
Comparative analysis of protein expression using 2-DE during seed protein accumulation 139
ABSTRACT 139
INTRODUCTION 141
MATERIAL AND METHODS 143
Plant materials 143
Protein two-dimensional gel electrophoresis 144
Protein identification using peptide mass fingerprinting (PMF) 145
RESULTS AND DISCUSSION 147
Characterization of developing soybean seed and outline of protein expression 147
REFERENCES 153
๊ตญ๋ฌธ์ด๋ก 157Docto
์ธ๋ณดํ๋ฃจ๋ ์ธ ๋ง์ทจ ํ ๊ฐ์ฑ ๋ฐ์์ ์์ธก ์ธ์๋ก์์ ์์ ์ค ๋ํ ๊ฒ์ฌ์ ์ ์ฉ์ฑ
ํ์๋
ผ๋ฌธ (์์ฌ)-- ์์ธ๋ํ๊ต ๋ํ์ : ์ํ๊ณผ(๋ง์ทจํต์ฆ์ํ๊ณผ), 2013. 8. ๊นํฌ์.Introduction: Emergence agitation (EA) is common after sevoflurane anesthesia in children, but its appearance cannot be predicted. We investigated whether the intraoperative EEG during sevoflurane anesthesia can indicate the occurrence or degree of EA in children.
Methods: EEG-derived parameters (SEF95, beta, alpha, theta, and delta power) were measured at 2.0 vol% (during the maintenance of anesthesia) and 0.7 vol% (during emergence) end-tidal sevoflurane (EtSEVO) anesthesia in 29 pediatric patients (aged from 1 to 6 years). EA was evaluated using the emergence agitation score (EAS1-5) at the post-anesthetic care unit (PACU) on arrival (EAS 0) and at 15 and 30 minutes after the arrival (EAS 15 and EAS 30). The correlation between EEG-derived parameters and EA score was analyzed using Spearman correlation, and receiver operating characteristic (ROC) curve analysis was used to measure the predictability.
Results: EA occurred in 11 patients. The alpha power at 0.7 vol% of EtSEVO was positively correlated with EAS 15 and EAS 30 (Spearman correlation coefficient0.392 and 0.566, p = 0.035 and 0.001, respectively). The theta/alpha ratio at 0.7 vol% of EtSEVO was negatively correlated with EAS 30 (Spearman correlation coefficient-0.478, p = 0.009). There were no significant differences in SEF95 at 2.0 vol% and 0.7 vol% of EtSEVO between patients with EA and those who without EA. The area under the ROC curve of the percentage of alpha bands at 0.7 vol% of EtSEVO and the occurrence of EA was 0.672.
Conclusions: We conclude that children showing high alpha powers and low theta powers (= low theta/alpha ratio) during emergence from sevoflurane anesthesia are at high risk of EA in PACU. (cris.nih.go.kr number, KCT0000652)I. Introduction 6
II. Methods 8
III. Results 12
IV. Discussions 20
V. References 24Maste
Financial Pressure due to the COVID-19 Pandemic and Family Life and Psychological Well-Being in Korea: Short-Term Longitudinal Impacts and Moderators
์ฐ๊ตฌ๋ชฉ์ : ๋ณธ ์ฐ๊ตฌ๋ ์ฝ๋ก๋19 ์ฅ๊ธฐํ๋ก ์ธํ ๊ฐ๊ณ๊ฒฝ์ ์
ํ๊ฐ ๊ฒฝ์ ์ํ, ๊ฐ์กฑ์ํ, ์ฌ๋ฆฌ์ ๋ณต์ง, ๊ฐ์กฑ ๋ฐ ์ฌํ๊ด๊ณ๋ง ๋ณํ์ ์ฐจ์ด๋ฅผ ๊ฐ์ ธ์๋์ง๋ฅผ ํ์
ํ๊ณ , ๊ฐ๊ณ๊ฒฝ์ ์
ํ๊ฐ ์ฌ๋ฆฌ์ ๋ณต์ง์ ๋ฏธ์น๋ ์ํฅ์ ๊ฐ์กฑ ๋ฐ ์ฌํ๊ด๊ณ๋ง ์์์ด ์กฐ์ ํ๋์ง๋ฅผ ๊ฒ์ฆํ๋ ๊ฒ์ ๋ชฉ์ ์ผ๋ก ํ๋ค. ์ฐ๊ตฌ๋ฐฉ๋ฒ: 2020๋
5์๊ณผ 11์ ๋ ์ฐจ๋ก์ ๊ฑธ์น ์จ๋ผ์ธ์กฐ์ฌ์ ๋ชจ๋ ์ฐธ์ฌํ 561๋ช
(์ฐ๋ น: 20-64์ธ)์ ์ฐ๊ตฌ๋์์ผ๋ก ํผํฉ๋ถ์ฐ๋ถ์๊ณผ ๋ค์คํ๊ท๋ถ์์ ์ด์ฉํ์ฌ ์๋ฃ๋ฅผ ๋ถ์ํ์๋ค. ์ฐ๊ตฌ๊ฒฐ๊ณผ: 1์ฐจ์กฐ์ฌ์ 2์ฐจ์กฐ์ฌ ์ฌ์ด์ ๊ฐ๊ณ๊ฒฝ์ ๊ฐ ์
ํ๋ ์ง๋จ์ ๊ฐ์ ๊ธฐ๊ฐ ๋์ ํ๋ณต๊ฐ๊ณผ ๊ฐ์กฑํ๋ ฅ์ฑ์ด ๋ฎ์์ก๊ณ , ์คํธ๋ ์ค ์์ค์ ๋์์ก๋ค. ๋ฐ๋ฉด ๊ฐ๊ณ๊ฒฝ์ ๊ฐ ์ ์ง๋์๊ฑฐ๋ ๊ฐ์ ๋ ์ง๋จ์ ์ฃผ๊ด์ ํ๋ณต๊ฐ์ด ์คํ๋ ค ํฅ์๋์๋ค. 1์ฐจ์กฐ์ฌ์์์ ํ๋ณต๊ณผ ์คํธ๋ ์ค๋ฅผ ํต์ ํ ์ํ์์ 2์ฐจ์กฐ์ฌ ์์ ์ ํ๋ณต๊ณผ ์คํธ๋ ์ค๋ฅผ ๊ฐ๊ฐ ์ข
์๋ณ์๋ก ํ๋ ํ๊ท๋ถ์ ๊ฒฐ๊ณผ, ๊ฐ๊ณ๊ฒฝ์ ๊ฐ ์
ํ๋ ๊ฒฝ์ฐ ํ๋ณต๊ฐ(2์ฐจ์กฐ์ฌ)์ ๋ฎ์๊ณ ์คํธ๋ ์ค(2์ฐจ์กฐ์ฌ) ์์ค์ ๋์๋ค. ๋ํ ๊ฐ๊ณ๊ฒฝ์ ์
ํ์ ํ๋ณต์ ๊ด๊ณ์์ ๊ฐ์กฑํ๋ ฅ์ฑ ๋ฐ ์น๊ตฌ์ ์ง์ ๋ ๊ฐ์ง ๋ชจ๋์ ์กฐ์ ํจ๊ณผ๊ฐ ์ ์ํ์๋ค. ํนํ ๊ฐ์กฑํ๋ ฅ์ฑ์ ๊ฐ๊ณ๊ฒฝ์ ๊ฐ ํ๋ณต์ ๋ฏธ์น๋ ๋ถ์ ์ ์ํฅ์ ์ํํ์๋ค. ๊ทธ๋ฌ๋ ๊ฐ๊ณ๊ฒฝ์ ์
ํ๊ฐ ์คํธ๋ ์ค์ ๋ฏธ์น ์ํฅ์ ๋ํด์๋ ์กฐ์ ํจ๊ณผ๊ฐ ๋ฐ๊ฒฌ๋์ง ์์๋ค. ๊ฒฐ๋ก : ๋ณธ ์ฐ๊ตฌ๊ฒฐ๊ณผ๋ ์ฝ๋ก๋19๊ฐ ์ฅ๊ธฐํํ๋ฉด์ ๊ฐ๊ณ๊ฒฝ์ ์
ํ ์ฌ๋ถ์ ๋ฐ๋ฅธ ์ฌ๋ฆฌ์ ์ธก๋ฉด์์์ ์๊ทนํ๊ฐ ๋ํ๋๊ณ ์์์ ๋ณด์ฌ์ค๋ค. ๋ฐ๋ผ์ ์
ํ๋ ๊ฐ๊ณ๊ฒฝ์ ์ ๋ํ ์ง์๊ณผ ํจ๊ป ๊ฐ์กฑํ๋ ฅ์ฑ์ ๊ฐํํ๋ ๊ฐ์กฑ์ง์์ด ํ์ํจ์ ์์ฌํ๋ค.
Objectives: This study focuses on changes in family economic conditions caused by the prolonged COVID-19 pandemic. The purpose of this study was to investigate the changes in family life, individual psychological well-being, and relationship resources during COVID-19 depending on whether the economic conditions of the family have negatively been impacted by the pandemic or not. We also examined whether family resilience and support from friends moderated the relationship between economic deterioration and psychological well-being. Method: Data were collected from 561 Koreans (age: 20-64) at two time points in May 2020 (W1) and November 2020 (W2). Mixture ANOVAs and multiple regression analyses were conducted. Results: Respondents whose family economic situation deteriorated between W1 and W2 reported a decrease in happiness and family resilience, as well as an increase in perceived stress during the same period. In contrast, those whose economic conditions remained the same or improved experienced a slight increase in happiness. The economic deterioration of the family was respectively associated with a lower level of happiness and a higher level of stress at W2 after controlling for happiness and stress at W1. Family resilience and support from friends moderated the association between family economy and happiness, however the moderation effect was not found in the relationship between a decline in family economy and stress. Conclusions: Our results suggest that families with worsened economic situations tend to experience more difficulties in psychological well-being due to the prolonged pandemic although family resilience buffered the negative impact. Policies and family services need to provide financial support and strengthen family resilience particularly for individuals and families whose economic situations have deteriorated during the crisis.N