25 research outputs found
Microglial STAT3-mediated neuron-microglia interactions in major depressive disorder
ํ์๋
ผ๋ฌธ (๋ฐ์ฌ)-- ์์ธ๋ํ๊ต ๋ํ์ : ์๊ณผ๋ํ ์๊ณผํ๊ณผ, 2019. 2. ์์๊ท.๋ฏธ์ธ์๊ต์ธํฌ๋ ์ค์ถ์ ๊ฒฝ๊ณ์ ์กด์ฌํ๋ ์ ๊ฒฝ์๊ต์ธํฌ๊ณ์ ํ ์ข
๋ฅ๋ก ๋์ ์ฒ์์ ์ ๊ฒฝ๊ธฐ๋ฅ์ ๋ณด์กฐํ๊ฑฐ๋ ๋ณดํธํ๋ ๊ธฐ๋ฅ์ ํ๋ค. ํนํ, ์ ๊ฒฝ-๋ฏธ์ธ์๊ต์ธํฌ์ ์ํธ์์ฉ์ ์ ๊ฒฝ-๋ฉด์ญ๊ณ๋ฅผ ์ ์์ ์ผ๋ก ์ ์งํ๋ ๋ํ์ ์ธ ๊ธฐ์ ์ค ํ๋๋ก ์๋ ค์ ธ ์์ผ๋ฉฐ, ๋ฏธ์๊ต์ธํฌ์ ํ์ฑํ ์ํ๋ฅผ ์กฐ์ ํ๋ ๊ฒ์ ์ ๊ฒฝ-๋ฉด์ญ๊ณ์ ๊ท ํ์ ์ ์งํ๋๋ฐ ๋งค์ฐ ์ค์ํ๋ค. ์ ๊ฒฝ-๋ฉด์ญ๊ณ์ ๋ถ๊ท ํ์ ๊ณง ์์ธ ํ์ด๋จธ๋ณ, ํํจ์จ๋ณ, ์ฃผ์์ฐ์ธ์ฅ์ ๋ฑ ์ฌ๋ฌ ์ ๊ฒฝ์ ์ ์งํ์ ์์ธ์ด ๋๊ธฐ๋ ํ๋ค. ํ์ง๋ง ์ ๊ฒฝ-๋ฏธ์ธ์๊ต์ธํฌ์ ์ํธ์์ฉ์ด ์ด๋ฌํ ์ ๊ฒฝ์ ์ ์งํ์์ ์ด๋ค ๊ธฐ๋ฅ์ ํ๋์ง๋ ์๋ ค์ ธ ์์ง ์๋ค. ์ ํธ๋ณํ ๋ฐ ์ ์ฌํ์ฑ์ธ์ 3 (STAT3)๋ ์ผ๋ฐ์ ์ผ๋ก ๋ฉด์ญ์ธํฌ์์ ๋ค์ํ ์ฌ์ดํ ์นด์ธ๊ณผ ์ฑ์ฅ์ธ์๋ค์ ์ํด ๋ฐํ๋๊ณ , ์ธํฌ ํ์ฑํ๋ฅผ ์ผ์ผ์ผ ์ผ์ฆ์ฑ๋ฐ์์ ์ผ์ผํค๋ ์ญํ ์ ์ ์ ์์ด๋ค. ์ด ์ฐ๊ตฌ์์๋ ๋ฏธ์ธ์๊ต์ธํฌ-ํน์ด์ STAT3 ๊ฒฐ์์ด ์ฃผ์์ฐ์ธ์ฅ์ ๊ฐ์ ์ ๊ฒฝ์ ์ ์งํ์์ ์ ๊ฒฝ-๋ฏธ์ธ์๊ต์ธํฌ์ ์ํธ์์ฉ์ ํตํด ์ ๊ฒฝ๋ฉด์ญ๊ณ์ ๊ท ํ์ ์ ์งํ๊ณ ์ฆ์์ ์ํ์ํฌ ๊ฒ์ด๋ผ๋ ๊ฐ์ค์ ์ธ์ ์ฐ๊ตฌ๋ฅผ ์งํํ๋ค. ๋จผ์ , ๋ฏธ์ธ์๊ต์ธํฌ-ํน์ด์ STAT3 ๊ฒฐ์ (STAT3fl/flLysM-Cre+/-) ๋ง์ฐ์ค ๋ชจ๋ธ ์ ์ํ์ฌ ๋ฏธ์ธ์๊ต์ธํฌ์ STAT3 ์ ์ ์ ํ์ฑ์ ์ต์ ์์ผฐ๊ณ , ์ฅ๊ธฐ๊ฐ์ ์คํธ๋ ์ค๋ก ์ฐ์ธ์ฆ์ ์ ๋ํ ํ ํ๋๋ถ์์คํ์ธ ๊ฐ์ ์์, ๊ผฌ๋ฆฌ ๋งค๋ฌ๋ฆฌ๊ธฐ, ์๋น ์ ํธ ๋ฐ ์คํ ํ๋ ํ
์คํธ๋ฅผ ์ํํ์ฌ ํญ์ฐ์ธ ์ ์ฌ ํ๋์ ๋ณด์์ ํ์ธํ๋ค. ํฅ๋ฏธ๋ก์ด ์ ์ STAT3๊ฐ ๊ฒฐ์๋ ๋ฏธ์ธ์๊ต์ธํฌ๊ฐ ์ฃผ๋ณ์ ์ ๊ฒฝ์ธํฌ์ ์ํธ์์ฉ์ ํ์ฌ ์ ๊ฒฝ์ธํฌ๋ก๋ถํฐ ๋์์ธํฌ ์ฝ๋ก๋-์๊ทน์ธ์ (M-CSF)์ ๋ถ๋น๋ฅผ ์ฆ๊ฐ์์ผฐ๋ค๋ ๊ฒ์ด๋ค. ์ํธ์์ฉ์ ํ ์ ๊ฒฝ์ธํฌ๋ M-CSF๋ฅผ ์๊ฐ๋ถ๋นํ์ฌ ํญ์ฐ์ธ ์ ํธ์ ๋ฌ๊ฒฝ๋ก๋ก ์๋ ค์ง ERK1/2, Akt/GSK3ฮฒ๊ฐ ํ์ฑํ ๋์๊ณ , ๋-์ ๋ ์ ๊ฒฝ์ฑ์ฅ์ธ์ (BDNF) ๋ฐํ์ด ์ฆ๊ฐ๋์๋ค. ERK1/2, Akt/GSK3ฮฒ ์ ํ์ฑํ์ BDNF ๋จ๋ฐฑ์ง์ ์ ๊ฒฝ์ธํฌ์์์ ๊ธฐ๋ฅ์ ์ ๊ฒฝ์ ๋ฌ๋ฌผ์ง์ ๋ฐฉ์ถ์ ์ฆ๊ฐ์ํค๋ ๊ฒ์ผ๋ก ์ ์๋ ค์ ธ ์์ผ๋ฉฐ, ์ด๋ ๊ณง ๋ง์ฐ์ค ๋ชจ๋ธ์์ ๋ณด์ฌ์ค ํญ์ฐ์ธ ์ ์ฌ ํ๋์ ์ค๋ช
ํ ์ ์๋ ๊ทผ๊ฑฐ๊ฐ ๋๋ค. ๊ฒฐ๋ก ์ ์ผ๋ก, ๋ฏธ์ธ์๊ต์ธํฌ STAT3์ ๊ธฐ๋ฅ ์ฅ์ ๋ M-CSF์ ์ํด ๋งค๊ฐ๋ ์ ๊ฒฝ์ธํฌ ํ์ฑ์ ํตํด ์ฐ์ธ์ฆ ๊ด๋ จ ํ๋์ ์กฐ์ ํ๋ฉฐ, ๋ฏธ์ธ์๊ต์ธํฌ ํน์ด์ ์ธ STAT3 ๊ธฐ๋ฅ ์ต์ ๋ ๊ธฐ์กด์ ์ฐ์ธ์ฆ ์น๋ฃ๊ฐ ๊ฐ๊ณ ์๋ ํ๊ณ์ ์ ๊ทน๋ณต ํ ์ ์๋ ์๋ก์ด ์น๋ฃ ์ ๋ต์ด ๋ ์ ์์์ ์์ฌํ๋ค.Neuron-microglia interactions play a crucial role in maintaining the neuroimmune system. The balance of neuroimmune system has emerged as an important process in the pathophysiology of depression. However, how neuron-microglia interactions contribute to major depressive disorders has been poorly understood. Herein, I demonstrated that microglia-derived neuronal changes induced antidepressive-like behavior by using microglia-specific signal transducer and activator of transcription 3 (STAT3) knockout (STAT3fl/flLysM-Cre+/-) mice. I found that microglia-specific STAT3 knockout mice showed antidepressive-like behavior in the forced swim, tail suspension, sucrose preference and open field tests. Surprisingly, the secretion of macrophage colony-stimulating factor (M-CSF) was increased from neuronal cells in the brains of STAT3fl/flLysM-Cre+/- mice. Moreover, the phosphorylation of antidepressant-targeting mediators and brain-derived neurotrophic factor (BDNF) expression were increased in the brains of STAT3fl/flLysM-Cre+/- mice as well as in neuronal cells in response to M-CSF stimulation. Collectively, microglial STAT3 regulates depression-related behaviors via M-CSF-mediated neuronal activity, suggesting that inhibition of microglial STAT3 might be a new therapeutic strategy for depression.ABSTRACT 1
CONTENTS 3
LIST OF TABLES AND FIGURES 4
LIST OF ABBREVIATIONS 7
INTRODUCTION 8
MATERIALS AND METHODS 13
RESULTS 26
FIGURES 36
DISCUSSION 89
REFERENCES 98
ABSTRACT IN KOREAN 110Docto
Design, Synthesis and Application of Chiral Diamine-based Building Blocks via Diaza-Cope Rearrangement (DCR)
ํ์๋
ผ๋ฌธ (๋ฐ์ฌ)-- ์์ธ๋ํ๊ต ๋ํ์ : ํํ๋ถ(์ ๊ธฐํํ์ ๊ณต), 2014. 2. ๊น๋ณ๋ฌธ.Much interest has been concentrated in the vininal diamine chemistry since many metal-based catalyst and organocatalysts as well as biologically active molecules containing the diamine structure have been synthesized. Diaza-Cope rearrangement (DCR) is a versatile tool for providing a variety of symmetrically-substituted as well as non-symmetrically-substituted chiral vicinal diamines. As the DCR route was introduced, it has rendered the structural tuning and thus electronic diversification of diamino functionality at ease so that many chemists could discover and develop new catalysts and applications owing to the simplicity and effectiveness of the rearrangement. However, use of the DCR for the construction of chiral building blocks for physiologically active molecules or peptidomimetic structures has not been as actively pursued as for catalysts.
The DCR allows for stereospecific synthesis of chiral vicinal diamines through the rearrangement of diimines prepared from 1,2-bis(2-hydroxyphenyl)-1,2-diaminoethane (hpen) and aldehydes. With a broad perspective, the chiral nonsymmetrical 1,2-disubstituted vicinal diamines could serve as suitable intermediates for the preparation of many physiologically active compounds. Using the hpen as a starting material, a number of useful chiral molecules containing diamine functionality can be synthesized.
Piperazine-2-carboxylic acid has been utilized as an amino acid surrogate in many biologically active compounds. In Chapter 1, the development of an efficient route for enantiopure trans-3-arylpiperazine-2-carboxylic acid derivatives is described though the DCR process. A complete transfer of stereochemical integrity was observed for the transformation. Piperazine ring formation from the chiral 1,2-ethylenediamine derivatives using diphenylvinylsulfonium triflate, followed by oxidation using Ru(III)Cl3โขH2O in the presence of NaIO4 provided the desired enantiopure trans-3-arylpiperazine-2-carboxylic acid derivatives.
The rearrangement also allows us to prepare ฮณ,ฮด-diamino acids, which may be useful for the synthesis of Tamiflu-type antiviral agents as well as various biologically active compounds. In Chapter II, we report the one-pot reaction for the synthesis of ฮณ,ฮด-diimino esters with two adjacent chiral centers in enantiomerically pure form through DCR of diimines formed from (R,R)-hpen and aldehydes. DFT computation provides interesting understanding into the stereospecific rearrangement reaction. The crystal structure of the product diimine formed from the reaction of (R,R)-hpen and 2,6-dichlorobenzaldehyde shows that the reaction gives the product in S,S configuration.
Preparation of vicinal quaternary carbon centers containing vicinal diamines is synthetically challenging task. In Chapter III, we show that the synthesis of a twinned alanine derivative is efficiently accomplished through the DCR method. Reaction between (R,R)-hpen and methyl pyruvate gives the diaza-Cope rearrangement product with good yield and excellent stereospecificity. The product containing two chiral quaternary carbon centers on vicinal position is characterized by high performance liquid chromatography (HPLC) and X-ray crystallography. DFT computation helps the understanding of why the diaza-Cope rearrangement takes place readily with methyl pyruvate but not with other ketones like acetone and substituted acetophenones.
The structural prevalence of chiral vicinal diamines as versatile chiral building blocks has led to an intense demand of useful tools to simply and inexpensively determine the enantiomeric excess (ee) of the diamine molecules. In Chapter IV, we find that use of sugar molecules such as ribose and arabinose as chiral derivatizing agents is quite efficient in providing good analytical tool to determine the enantiopurities of C2-symmetric vicinal diamines. In this protocol, sugars or diamines do not need to be protected or modified in advance.CONTENTS
Abstract 5
List of Figures 8
List of Schemes 9
List of Tables 10
Background 11
Chapter I.
Synthesis of Chiral trans-3-Arylpiperazine-2-
carboxylic Acid Derivatives
1. Introduction 24
2. Result and Discussion 26
3. Conclusion 33
4. Experimental 33
Chapter II.
Stereospecific Synthesis of ฮณ,ฮด-Diamino Esters
1. Introduction 48
2. Result and Discussion 49
3. Conclusion 55
4. Experimental 56
Chapter III.
Stereospecific Synthesis of a Twinned Alanine Ester
1. Introduction 67
2. Result and Discussion 69
3. Conclusion 76
4. Experimental 77
Chapter IV.
Sugar as Chiral Derivatizing Agent for the
Determination of the Enantiopurity of Vicinal Diamines
1. Introduction 81
2. Result and Discussion 82
3. Conclusion 86
4. Experimental 86
References 90
Appendix A (NMR spectra) 104
Appendix B (HPLC spectra) 142
Appendix C (Computational data) 167
Appendix D (Crystal data) 172
๊ตญ๋ฌธ์ด๋ก 204Docto
Anterior clinoid mucocele coexisting with sphenoid sinus mucocele
An anterior clinoid mucocele, known to be extremely rare, can lead to visual complications due to its proximity to the optic nerve. We report a patient who developed visual disturbance due to an anterior clinoid mucocele. Interestingly, the anterior clinoid mucocele coexisted with a sphenoid sinus mucocele. When an anterior clinoid mucocele coexists with a sphenoid sinus mucocele, more deliberate diagnostic and therapeutic approaches must be considered according to our first experienceope
ํ๋ผ์ฆ๋ง ๋์จํ ์ ์ด์ฉํ ๊ธ์ ๋๋ ธ๋ถ๋ง array ์ ์กฐ์ ๊ดํ ์ฐ๊ตฌ
ํ์๋
ผ๋ฌธ (๋ฐ์ฌ)-- ์์ธ๋ํ๊ต ๋ํ์ : ์ฌ๋ฃ๊ณตํ๋ถ, 2013. 2. ์ด์ ์ค.A new method of producing metal nanoparticle arrays was developed with the help of plasma-induced dewetting. Various metal films (Cu, Ag, Au, Si, Ni, Co, Ti) were successfully turned into nanoparticle arrays at low operating temperatures. The mechanism of the plasma-induced dewetting was also discussed. TEM and SEM images showed that the dewetting proceeded through heterogeneous hole nucleation mechanism.
The nanoparticles produced by plasma-induced dewetting were more uniformly distributed on the substrate than those produced by thermal annealing. It was revealed that low process temperature of the plasma treatment prevented coarsening of the nanoparticles, and uniformly distributed holes on the film surface, resulting in uniform nanoparticle arrays, were detected during plasma treatment.
According to AES (auger electron spectroscopy), oxidation of the nanoparticles occurred less during plasma treatment because of the low operating temperature. Even at the low temperature, ion bombardment which transfers high energy to the substrate surface atoms made dewetting possible.
The uniformity of nanoparticle arrays was controlled by varying plasma parameters. Plasma density and electron temperature were controlled by varying working pressure and applied RF power. Sheath voltage was also controlled directly using substrate bias. It was found that uniform nanoparticle arrays were produced when hole generation was increased by using high ion bombardment energy. When a low amount of energy was transferred to the substrate, small numbers of holes were generated on the film surface, resulting in non-uniformly distributed nanoparticles.1. Introduction
2. Research background and theory
2.1 Dewetting of thin film
2.1.1 Liquid thin film dewetting
2.1.2 Solid-state dewetting of thin film
2.1.2.1 Hole formation
2.1.2.2 Hole growth
2.2 Inductively coupled plasma
3. Experimental procedure
3.1 Film deposition and post-treatment
3.2 Analysis methods
4. Result and Discussions
4.1 Formation of Cu nanoparticle arrays by plasma-induced dewetting
4.2 The hole nucleation mechanism of the plasma-induced dewetting
4.2.1 Surface morphology analysis with SEM
4.2.2 TEM analysis
4.2.3 AFM analysis
4.2.4 SLP analysis
4.3 Uniformity control of nanoparticle arrays
4.3.1 Process temperature effect
4.3.2 Ion bombardment energy effect
4.4 Various metal nanoparticle arrays produced by plasma-induced dewetting
4.4.1 Low melting temperature metals
4.4.2 High melting temperature metals
5. ConclusionDocto
๋ค๊ณต์ฑ ์ธ์ฐ ์นผ์ ์ธ๋ผ๋ฏน์ค์ ์ ์กฐ ๋ฐ ํน์ฑ
ํ์๋
ผ๋ฌธ(์์ฌ)--์์ธ๋ํ๊ต ๋ํ์ :์ฌ๋ฃ๊ณตํ๋ถ,2001.Maste
Genetic variation and transcriptome by developmental morphology and position of strobilus of Pinus densiflora f. multicaulis Uyeki
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ผ๋ฌธ(๋ฐ์ฌ)--์์ธ๋ํ๊ต ๋ํ์ :๋์
์๋ช
๊ณผํ๋ํ ์ฐ๋ฆผ๊ณผํ๋ถ(์ฐ๋ฆผํ๊ฒฝํ์ ๊ณต),2019. 8. ๊ฐ๊ท์.Pinus densiflora f. multicaulis Uyeki is one of the unique varieties of pine trees and is distributed mainly in Korea and Japan. Unlike the pine tree, the trunk is not developed straightly, but several branches are separated from the beginning of the ground. Thus, various types of tree appear for each individual, and they have excellent value. P. densiflora f. multicaulis are rarely distributed in nature and propagate by combining them for commercial or research purposes. In addition, Pinus species have been reported to have bisexual strobilus mixed male and female organ, and the development of bisexual strobilus has been observed more frequently in other species than in other species. and recently some transcriptome analysis has been conducted in two overseas species. Also, studies on the reasons for the development of bisexual strobili in the pine trees and the factors determining the reproductive organs have been continuously carried out. In Korea, the genome sequencing project of Pinus densiflora is in the beginning stage, and genetic research on P. densiflora f. multicaulis is also in the basic stage. In this study, we selected P. densiflora f. multicaulis Uyeki that have a low height and a lot of strobili, and analyzed the characteristics of the strobili and mature cones of P. densiflora f. multicaulis by the morphological, transcriptomical and genetical variances differences.
As a result of the analysis of cones and seeds, the on P. densiflora f. multicaulis showed a developmental pattern of sex transformation consistent with the results of the other species of pine trees. As a result of morphological analysis of the cones and seeds developed at the apical and lateral sides, it was found that side cones and seeds from the side cones had lower germination times and growth than the cones and seeds developed at the apical them. However, it was confirmed that the seeds obtained from the side cones were close to the germination rate of the seeds obtained from the apical cones.
As a result of analysis of transcriptome, the LEA gene family, cyplp029 gene, WRKY transcription factor ZmWRKY17, and dhn_ESK2 and so on were expressed in male strobili. In the beginning of biosexual strobili, we identified PtLTP1 to control ethylene, PIN1 to transport Auxin and NPF7 which transports nitrogen respectively. In female strobili, gibberellin, which is always expressed specifically in female tissues, the precursors of hormones such as CYPs and gibberellin metabolism genes, which are involved in the biosynthesis of gibberellin and brassinosteroid, in addition, in female strobili of side part, LINE-1 retrotransposable element was identified.
As a result of the SNPs comparative analysis of normal population only developed apical cones and abnormal population developed side cones, only 16,666 SNPs were found in the two groups. Homo / homo SNPs 92, all of which matched within the population and differ between groups, were selected. Mapping to the sequence and RNA-seq data of the reference genome at the selected SNPs site revealed the transposon PpRT1 of Pinus pinaster. The function of the sequence of the selected SNPs should be clarified through further studies.
From the results of this study, it was found that the same cone as the apical of branch is also developed in the lateral of branches. And genes that are presumed to be expressed by the flower developmental structure of P. densiflora f. multicaulis can be selected. In addition, we could find genetic differences according to the location of female strobili. Future studies such as the functional study of the genes found in this study and the development of the markers according to the results of SNPs molecular markers will be necessary.๋ฐ์ก(Pinus densiflora f. multicaulis Uyeki)์ ์๋๋ฌด์ ๋
ํนํ ํ์ข
์ค ํ๋๋ก์จ ํ๊ตญ๊ณผ ์ผ๋ณธ์ ์ฃผ๋ก ๋ถํฌํ๋ค. ์๋๋ฌด์ ๋ฌ๋ฆฌ ์ค๊ธฐ๊ฐ ๊ณง๊ฒ ๋ฐ๋ฌํ์ง ์๊ณ ์ง์๋ถ์์๋ถํฐ ์ธ ๊ฐ ์ด์ ๋ค์์ ์๊ฐ์ด ๊ฐ๋ผ์ ธ ๋์จ๋ค. ๊ทธ๋ฆฌํ์ฌ ๊ฐ์ฒด ๋ณ๋ก ๋ค์ํ ์ํ์ด ๋ํ๋ ๊ด์์ ๊ฐ์น๊ฐ ๋ฐ์ด๋๋ค. ๋ฐ์ก์ ์์ฐ์ ์ง๋จ๋ถํฌํ๋ ๊ฒฝ์ฐ๊ฐ ๊ทนํ ๋๋ฌผ๋ฉฐ ์์
์ ๋๋ ์ฐ๊ตฌ์ ์ธ ๋ชฉ์ ์ผ๋ก ์ ๋ชฉํ์ฌ ์ฆ์ํด์๋ค. ๋๋ถ์ด ์๋๋ฌด์ ์์ข
๋ค์ ์๊ตฌํ์ ์๊ตฌํ๊ฐ ํผํฉ๋์ด ์๋ ์์ฑ๊ตฌํ๊ฐ ๋ฐ์ํ๋ค๊ณ ๋ณด๊ณ ๋์ด ์์ผ๋ฉฐ, ๋ฐ์ก์์๋ ์์ฑ๊ตฌํ์ ๋ฐ๋ฌ์ด ๋ค๋ฅธ ์์ข
๋ณด๋ค ๋ง์ ๊ฒ์ด ๊ด์ฐฐ๋์ด์๋ค. ์ต๊ทผ์ ๋ค์ด์์ผ ํด์ธ์์ ์๋๋ฌด์ข
์ ๋ ๊ฐ์ง ์์ข
์์ ์ ์ฌ์ฒด ๋ถ์์ด ์งํ๋์๋ค. ๊ทธ๋ฆฌ๊ณ ์๋๋ฌด์์์ ์์ฑ๊ตฌํ๊ฐ ๋ฐ์ํ๋ ์ด์ ๋ ์์๊ธฐ๊ด์ ๊ฒฐ์ ํ๋ ์์ธ์ ๋ํ ์ฐ๊ตฌ๊ฐ ์ง์์ ์ผ๋ก ์ด๋ฃจ์ด์ง๊ณ ์๋ค. ๊ตญ๋ด์์๋ ์๋๋ฌด(Pinus densiflora)์ ์ ์ ์ฒด ํด๋
ํ๋ก์ ํธ๊ฐ ์์ํ๋ ๋จ๊ณ์ ์์ผ๋ฉฐ, ๋ฐ์ก์ ๋ํ ์ ์ ์ ์ธ ์ฐ๊ตฌ ๋ํ ๊ธฐ์ด๋จ๊ณ์ ์๋ค. ๋ณธ ์ฐ๊ตฌ์์๋ ์๋๋ฌด ์์์ ์๊ณ ๊ฐ ๋ฎ๊ณ ๊ตฌํ๊ฐ ๋ง์ด ๋ฐ๋ฌํ๋ ๋ฐ์ก์ ์ ์ ํ์ฌ ๋ฐ์ก์ ๊ตฌํ ๋ฐ ์ฑ์๊ตฌ๊ณผ์ ํน์ฑ์ ํํํ์ , ์ ์ฌํ์ ๊ทธ๋ฆฌ๊ณ ์ ์ ํ์ ์ธ ์ฐจ์ด๋ฅผ ๋น๊ต ๋ถ์ํ์๋ค.
๊ตฌ๊ณผ์ ์ข
์ ๋ถ์ ๊ฒฐ๊ณผ, ๋ฐ์ก์ด ๊ธฐ์กด ์๋๋ฌด ์์ ํ์์ข
์ฐ๊ตฌ ๊ฒฐ๊ณผ์ ๋์ผํ ์ฑ์ ํํ๋ ์์ฑ๊ตฌํ์ ๋ฐ๋ฌ ํํ๋ฅผ ๋ณด์๋ค. ๊ทธ๋ฆฌ๊ณ ์ ๋จ๋ถ์ ์ธก๋ฉด๋ถ์์ ๋ฐ๋ฌํ ๊ตฌ๊ณผ ๋ฐ ์ข
์๋ฅผ ํํํ์ ์ผ๋ก ๋น๊ต ๋ถ์ํ ๊ฒฐ๊ณผ, ์ธก๋ฉด๋ถ์์ ๋ฐ์ํ ๊ตฌ๊ณผ์ ์ธก๋ฉด๋ถ ๊ตฌ๊ณผ์์ ์์ฐ๋ ์ข
์๊ฐ ์ ๋จ๋ถ์์ ๋ฐ๋ฌํ ๊ตฌ๊ณผ ๋ฐ ์ข
์์ ๋น๊ตํ์ฌ ๋ฐ์ํ๋ ์๊ธฐ์ ์์ฅ์ด ์ ์กฐํ๋ค๋ ๊ฒ์ด ๋ฐํ์ก๋ค. ๊ทธ๋ฌ๋ ์๊ฐ์ด ์ง๋๋ฉด ์ธก๋ฉด๋ถ์์ ์ป์ ์ข
์๊ฐ ์ ๋จ๋ถ์์ ์ป์ ์ข
์์ ๋ฐ์์จ์ ๊ฐ๊น์์ง๋ ๊ฒ์ ํ์ธํ ์ ์์๋ค.
๊ตฌํ๋ค์ ์ ์ฌ์ฒด ๋ถ์ ๊ฒฐ๊ณผ, ์๊ตฌํ์๋ LEA gene family์ cyplp029 gene, WRKY transcription factor ZmWRKY17, dhn_ESK2 ๋ฑ์ด ๋ฐํํ์์ผ๋ฉฐ, ์์ฑ๊ตฌํ์ ์์๋จ๊ณ์์๋ ์ํธ๋ (ethylene)์ ์กฐ์ ํ๋ PtLTP1, ์ฅ์ (Auxin)์ ์์กํ๋ PIN1, ์ง์๋ฅผ ์์กํ๋ NPF7.3์ ๋์ ํ์๋ค. ๊ทธ๋ฆฌ๊ณ ์๊ตฌํ์์๋ ์กฐ์ง์ ์์ ํน์ด์ ์ผ๋ก ๋ฐํํ๋ ์ง๋ฒ ๋ ๋ฆฐ๊ณผ ๋ธ๋ผ์๋
ธ์คํ
๋ก์ด๋ ์ํฉ์ฑ์ ๊ด์ฌํ๋ CYPs, gibberellin metabolism genes ๋ฑ ํธ๋ฅด๋ชฌ์ ์ ๊ตฌ์ฒด๋ค์ด ์ฃผ๋ก ๋์ ๋์๋ค. ํนํ, ์ธก๋ฉด๋ถ์์ ๋ฐ๋ฌํ๋ ์๊ตฌํ์์๋ LINE-1 retrotransposable element๋ฅผ ๋์ ํ์๋ค.
๋น๋
์ง ์ ๋จ์์๋ง ๊ตฌ๊ณผ๊ฐ ๋ฐ๋ฌํ๋ ์ง๋จ(AC, apical cone)๊ณผ ์ ๋จ ๋ฐ ์ธก๋ฉด์์ ๊ตฌ๊ณผ๊ฐ ๋ฐ๋ฌํ๋ ์ง๋จ(SC, side cone)์ ๋น๊ต ๋ถ์ ๊ฒฐ๊ณผ 16,666๊ฐ์ SNP๊ฐ ๋ ์ง๋จ๊ฐ์ ์ฐจ์ด๊ฐ ์์์ ๋ฐ๊ฒฌํ์์ผ๋ฉฐ, ๊ทธ ์ค ์ง๋จ ๋ด์์ ๋ชจ๋ ์ผ์นํ์ง๋ง ์ง๋จ๊ฐ์ ์ฐจ์ด๊ฐ ๋๋ homo/homo SNPs 92๊ฐ๋ฅผ ์ ๋ณํ์๋ค. ์ ๋ณํ SNPs ์์น์ reference genome์ ์์ด๊ณผ RNA-seq ๋ฐ์ดํฐ์ mappingํ ๊ฒฐ๊ณผ Pinus pinaster์ transposon PpRT1์ ๋ฐ๊ฒฌํ ์ ์์๋ค. ์ ๋ฐํ SNP์ ๋ํ ์์น์ ์์ด์ด ์ด๋ค ๊ธฐ๋ฅ์ ํ๊ณ ์๋์ง๋ ์์ง ์ถ๊ฐ ์ฐ๊ตฌ๋ฅผ ํตํ์ฌ ๋ฐ์ฌ๋๊ฐ์ผ ํ ๊ฒ์ด๋ค.
๋ณธ ์ฐ๊ตฌ๊ฒฐ๊ณผ๋ฅผ ํตํ์ฌ ๋น๋
์ง ์ธก๋ฉด์์๋ ์ ๋จ๊ณผ ๋์ผํ ์๊ตฌํ๊ฐ ๋ฐ๋ฌํ๋ค๋ ๊ฒ์ ๋ฐ๊ฒฌํ ์ ์์์ผ๋ฉฐ ๋ฐ์ก์ ํ๊ธฐ ๊ตฌ์กฐ์ ๋ฐ๋ผ ๋ฐํํ๋ ๊ฒ์ผ๋ก ์ถ์ ํ๋ ์ ์ ์๋ค์ ์ ๋ณํ ์ ์์๋ค. ๋ํ ์๊ตฌํ์ ๋ฐ์ ์์น์ ๋ฐ๋ฅธ ์ ์ ์ ์ฐจ์ด๋ฅผ ๋ฐ๊ฒฌ ํ ์ ์์๋ค. ํฅํ ๋ณธ ์ฐ๊ตฌ์์ ๋ฐ๊ฒฌํ ์ ์ ์๋ค์ ๊ธฐ๋ฅ ์ฐ๊ตฌ์ SNPs ๋ถ์ํ์ง ๋ถ์ ๊ฒฐ๊ณผ์ ๋ฐ๋ฅธ ํ์ง ๊ฐ๋ฐ ๋ฑ ํ์ ์ฐ๊ตฌ๊ฐ ํ์ํ ๊ฒ์ด๋ค.์ 1์ฅ ๋ฐ์ก์ ๊ตฌํ ๋ฐ๋ฌ ๋ฐ ๊ตฌ๊ณผ ๋ถ์ 1
์ 1์ ์๋ก 1
์ 2์ ์ฐ๊ตฌ์ฌ 3
์ 3์ ์ฌ๋ฃ ๋ฐ ๋ฐฉ๋ฒ 9
3.1 ๋ฐ์ก์ ๊ตฌํ ์ฑ์ทจ 9
3.2 ๊ตฌํ ์ค์ฒดํ๋ฏธ๊ฒฝ ๊ด์ฐฐ 9
3.3 ๋ฐ์ก์ ์ ๋จ๋ถ ๋ฐ๋ฌ๊ตฌ๊ณผ ๋ฐ ์ธก๋ฉด๋ถ ๋ฐ๋ฌ๊ตฌ๊ณผ ์ฑ์ทจ 10
3.4 ๊ตฌ๊ณผ ํํ์ ์ธก์ ๋ฐ ๋ถ์ 10
3.5 ์ข
์์ ๋ฐ์ํ
์คํธ 11
์ 4์ ๊ฒฐ๊ณผ 12
4.1 ๊ตฌํ์ ๊ตฌ์กฐ ๊ด์ฐฐ 12
4.1.1 ์ ๋จ๋ถ์ ์ธก๋ฉด๋ถ ๊ตฌํ์ ํํ์ ๋น๊ต 12
4.1.2 ๊ตฌํ์ ์ฑ์๊ณผ ์๋ถ 13
4.1.3 ํ ๋น๋
์ง ๋ด์์ ๋ฐ๋ฌํ๋ ๊ตฌํ์ ์กฐํฉ 17
4.2 ๊ตฌ๊ณผ ๋ฐ ์ข
์ ํน์ฑ ๋น๊ต 19
์ 5์ ๊ฒฐ๋ก ๋ฐ ๊ณ ์ฐฐ 29
์ 2์ฅ ๋ฐ์ก ๊ตฌํ์ ์ ์ฌ์ฒด ๋ถ์ 32
์ 1์ ์๋ก 32
์ 2์ ์ฐ๊ตฌ์ฌ 34
์ 3์ ์ฌ๋ฃ ๋ฐ ๋ฐฉ๋ฒ 37
3.1 ๋ฐ์ก์ ๊ตฌํ ์ฑ์ทจ ๋ฐ RNA ์ถ์ถ 37
3.2 Sequencing๊ณผ Quality control 37
3.3 de novo assembly and Annotation 37
3.4 Annotation of transcripts 38
์ 4์ ๊ฒฐ๊ณผ 39
4.1 De novo assembly 39
4.2 Gene expression profiling 40
4.3 Grouping of subclusters by expression pattern 45
4.3.1 Annotation by gene data base and blastn searching 47
4.3.2 Expression pattern Analysis of Group 1 48
4.3.3 Expression pattern Analysis of Group 2 54
4.3.4 Expression pattern Analysis of Group 3 60
4.3.5 Expression pattern Analysis of Group 4 67
4.3.6 Expression pattern Analysis of Group 6 71
์ 5์ ๊ฒฐ๋ก ๋ฐ ๊ณ ์ฐฐ 75
์ 3์ฅ ๋ฐ์ก ์๊ตฌํ ๋ฐ๋ฌ ์์น์ ๋ฐ๋ฅธ ์ ์ ์ฒด ๋ณ์ด 78
์ 1์ ์๋ก 78
์ 2์ ์ฐ๊ตฌ์ฌ 79
์ 3์ ์ฌ๋ฃ ๋ฐ ๋ฐฉ๋ฒ 81
3.1 ๋ฐ์ก ์ํ๋ง๊ณผ DNA ์ถ์ถ ๊ทธ๋ฆฌ๊ณ sequencing 81
3.2 SNP discovery 81
์ 4์ ๊ฒฐ๊ณผ 83
4.1 Reads output of genomicDNA of the 10 samples 83
4.2 SNPs discovery and filtering 83
4.3 SNPs selection 83
4.4 SNPs mapping on transcripts data 83
์ 5์ ๊ฒฐ๋ก ๋ฐ ๊ณ ์ฐฐ 87
์ 4์ฅ ์ข
ํฉ๊ฒฐ๋ก 89
์ 5์ฅ ํฅํ ์ฐ๊ตฌ ๋ฐฉํฅ 91
์ฐธ๊ณ ๋ฌธํ 92
Abstract 105
Supplemental data 108Docto
OX40 ๋ฆฌ๊ฐ๋๋ฅผ ๋ฐํํ๋ ์ง์ง ์ธํฌ ๊ธฐ๋ฐ NK ์ธํฌ ์ฆํญ ๊ธฐ์ ๊ฐ๋ฐ
DoctorNatural killer (NK) cell-based immunotherapy used to treat cancer requires the adoptive transfer of a large number of activated NK cells. To increase NK cells in numbers and improve their antitumor activity for clinical applications, ex vivo cultivation is a effective method. Recently, a remarkable activation and expansion of NK cells was achieved using K562 cells genetically engineered to express cytokines and co-stimulatory factors and additional novel co-stimulatory factors for NK cell activation and expansion are continuously being sought. In addition, the mechanism of NK cell expansion through the interaction between genetically engineered feeder cells expressing co-stimulatory factors and NK cells has not been elucidated. To address this problem, we developed genetically engineered K562 feeder cells expressing OX40 ligand (K562-OX40L). Using this new feeder cells, we systematically studied the roles of OX40 ligand for NK cell expansion. First, we demonstrated that NK cell purity, expansion rate were significantly augmented cultured with K562-OX40L compared to conventional K562. Second, we identified transient exposure to IL-21 had a synergistic effect with OX40 signaling for NK cell expansion. Finally, we demonstrated that homotypic interaction between NK cells through the OX40-OX40L axis is necessary for NK cell expansion
Cyclooxygenase inhibitors induce apoptosis in sinonasal cancer cells by increased expression of nonsteroidal anti-inflammatory drug-activated gene
Nonsteroidal anti-inflammatory drug-activated gene-1 (NAG-1) has recently been shown to be induced by nonsteroidal anti-inflammatory drugs (NSAIDs) and to have proapoptotic and antitumorigenic activities. Although sulindac sulfide induced apoptosis in sinonasal cancer cells, the relationship between NAG-1 and NSAIDs has not been determined. In this study, we investigated the induction of apoptosis in sinonasal cancer cells treated by various NSAIDs and the role of NAG-1 expression in this induction. The effect of NSAIDs on normal human nasal epithelial (NHNE) cells was also examined to evaluate their safety on normal cells. Finally, the in vivo anti-tumorigenic activity of NSAIDs in mice was investigated. In AMC-HN5 human sinonasal carcinoma cells, indomethacin was the most potent NAG-1 inducer and caused NAG-1 expression in a time- and dose-dependent manner. The induction of NAG-1 expression preceded the induction of apoptosis. Conditioned medium from NAG-1-overexpressing Drosophila cells inhibited proliferation of sinonasal cancer cells and induced apoptosis. In addition, in NAG-1 small interfering RNA-transfected cells, apoptosis induced by indomethacin was suppressed. In contrast, NAG-1 expression and apoptosis were not induced by NSAIDs or conditioned medium in NHNE cells. Furthermore, indomethacin induced a dose-dependent in vivo increase in the expression of NAG-1 mRNA in the mice tumors and the volume of xenograft tumors of AMC-HN5 cells in indomethacin-treated nude mice was reduced compared to that in control mice. In conclusion, indomethacin exerts proapoptotic and antitumorigenic effects in sinonasal cancer cells through the induction of NAG-1 and can be considered a safe and effective chemopreventive agent against sinonasal cancerope