Acquiring Word-Meaning Mappings for Natural Language Interfaces

This paper focuses on a system, WOLFIE (WOrd Learning From Interpreted Examples), that acquires a semantic lexicon from a corpus of sentences paired with semantic representations. The lexicon learned consists of phrases paired with meaning representations. WOLFIE is part of an integrated system that learns to transform sentences into representations such as logical database queries. Experimental results are presented demonstrating WOLFIE's ability to learn useful lexicons for a database interface in four different natural languages. The usefulness of the lexicons learned by WOLFIE are compared to those acquired by a similar system, with results favorable to WOLFIE. A second set of experiments demonstrates WOLFIE's ability to scale to larger and more difficult, albeit artificially generated, corpora. In natural language acquisition, it is difficult to gather the annotated data needed for supervised learning; however, unannotated data is fairly plentiful. Active learning methods attempt to select for annotation and training only the most informative examples, and therefore are potentially very useful in natural language applications. However, most results to date for active learning have only considered standard classification tasks. To reduce annotation effort while maintaining accuracy, we apply active learning to semantic lexicons. We show that active learning can significantly reduce the number of annotated examples required to achieve a given level of performance

The SOL Genomics Network Model: Making Community Annotation Work

The concept of community annotation is a growing discipline for achieving participation of the research community in depositing up‐to‐date knowledge in biological databases.
The Solanaceae Genomics Network ("SGN":http://sgn.cornell.edu/) is a clade‐oriented database (COD) focusing on plants of the nightshade family, including tomato, potato, pepper, eggplant, and tobacco, and is one of the bioinformatics nodes of the international tomato genome sequencing project. One of our major efforts is linking Solanaceae phenotype information with the underlying genes, and subsequently the genome. As part of this goal, SGN has introduced a database for locus names and descriptors, and a database for phenotypes of natural and induced variation. These two databases have web interfaces that allow cross references, associations with tomato gene models, and in‐house curated information of sequences, literature, ontologies, gene networks, and the Solanaceae biochemical pathways database ("SolCyc":http://solcyc.sgn.cornell.edu). All of our curator tools are open for online community annotation, through specially assigned “submitter” accounts. 

Currently the community database consists of 5,548 phenotyped accessions, and 5,739 curated loci, out of which more than 300 loci where contributed or annotated by 66 active submitters, creating a database that is truly community driven.
This framework is easily adaptable for other projects working on other taxa (for example see "http://chlamybase.org":http://chlamybase.org), greatly expanding the application of this user‐friendly online annotation system. Community participation is fostered by an active outreach program that includes contacting potential submitters via emails, at meetings and conferences, and by promoting featured user submitted annotations on the SGN homepage. The source code and database schema for all SGN functionalities are freely available. Please contact SGN at "sgn‐feedback[at]sgn.cornell.edu":mailto:[email protected] for more information

QueRIE: Collaborative Database Exploration

Interactive database exploration is a key task in information mining. However, users who lack SQL expertise or familiarity with the database schema face great difficulties in performing this task. To aid these users, we developed the QueRIE system for personalized query recommendations. QueRIE continuously monitors the user’s querying behavior and finds matching patterns in the system’s query log, in an attempt to identify previous users with similar information needs. Subsequently, QueRIE uses these “similar” users and their queries to recommend queries that the current user may find interesting. In this work we describe an instantiation of the QueRIE framework, where the active user’s session is represented by a set of query fragments. The recorded fragments are used to identify similar query fragments in the previously recorded sessions, which are in turn assembled in potentially interesting queries for the active user. We show through experimentation that the proposed method generates meaningful recommendations on real-life traces from the SkyServer database and propose a scalable design that enables the incremental update of similarities, making real-time computations on large amounts of data feasible. Finally, we compare this fragment-based instantiation with our previously proposed tuple-based instantiation discussing the advantages and disadvantages of each approach

OBJECTIVE: a benchmark for object-oriented active database systems

Cataloged from PDF version of article.Although much work in the area of Active Database Management Systems (ADBMSs) has been done, it is not yet clear how the performance of an active DBMS can be evaluated systematically. In this paper, we describe the OBJECTIVE Benchmark for object-oriented ADBMSs, and present experimental results from its implementation in an active database system prototype. OBJECTIVE can be used to identify performance bottlenecks and active functionalities of an ADBMS, and to compare the performance of multiple ADBMSs. (C) 1999 Published by Elsevier Science Inc. All rights reserved

The HARPS search for southern extra-solar planets. XX. Planets around the active star BD-08:2823

We report the detection of a planetary system around BD-08:2823, that includes at least one Uranus-mass planet and one Saturn-mass planet. This discovery serendipitously originates from a search for planetary transits in the Hipparcos photometry database. This program preferentially selected active stars and did not allow the detection of new transiting planets. It allowed however the identification of the K3V star BD-08:2823 as a target harboring a multiplanet system, that we secured and characterized thanks to an intensive monitoring with the HARPS spectrograph at the 3.6-m ESO telescope in La Silla. The stellar activity level of BD-08:2823 complicates the analysis but does not prohibit the detection of two planets around this star. BD-08:2823b has a minimum mass of 14.4+/-2.1 M_Earth and an orbital period of 5.60 days, whereas BD-08:2823c has a minimum mass of 0.33+/-0.03 M_Jup and an orbital period of 237.6 days. This new system strengthens the fact that low-mass planets are preferentially found in multiplanetary systems, but not around high-metallicity stars as this is the case for massive planets. It also supports the belief that active stars should not be neglected in exoplanet searches, even when searching for low-mass planets.Comment: 10 pages, 8 figures, 3 tables, accepted for publication in A&

Glasgow's Stereo Image Database of Garments

To provide insight into cloth perception and manipulation with an active binocular robotic vision system, we compiled a database of 80 stereo-pair colour images with corresponding horizontal and vertical disparity maps and mask annotations, for 3D garment point cloud rendering has been created and released. The stereo-image garment database is part of research conducted under the EU-FP7 Clothes Perception and Manipulation (CloPeMa) project and belongs to a wider database collection released through CloPeMa (www.clopema.eu). This database is based on 16 different off-the-shelve garments. Each garment has been imaged in five different pose configurations on the project's binocular robot head. A full copy of the database is made available for scientific research only at https://sites.google.com/site/ugstereodatabase/.Comment: 7 pages, 6 figure, image databas