Signal Recovery in Perturbed Fourier Compressed Sensing

In many applications in compressed sensing, the measurement matrix is a Fourier matrix, i.e., it measures the Fourier transform of the underlying signal at some specified `base' frequencies $\{u_i\}_{i=1}^M$, where $M$ is the number of measurements. However due to system calibration errors, the system may measure the Fourier transform at frequencies $\{u_i + \delta_i\}_{i=1}^M$ that are different from the base frequencies and where $\{\delta_i\}_{i=1}^M$ are unknown. Ignoring perturbations of this nature can lead to major errors in signal recovery. In this paper, we present a simple but effective alternating minimization algorithm to recover the perturbations in the frequencies \emph{in situ} with the signal, which we assume is sparse or compressible in some known basis. In many cases, the perturbations $\{\delta_i\}_{i=1}^M$ can be expressed in terms of a small number of unique parameters $P \ll M$. We demonstrate that in such cases, the method leads to excellent quality results that are several times better than baseline algorithms (which are based on existing off-grid methods in the recent literature on direction of arrival (DOA) estimation, modified to suit the computational problem in this paper). Our results are also robust to noise in the measurement values. We also provide theoretical results for (1) the convergence of our algorithm, and (2) the uniqueness of its solution under some restrictions.Comment: New theortical results about uniqueness and convergence now included. More challenging experiments now include

PEAR: PEriodic And fixed Rank separation for fast fMRI

In functional MRI (fMRI), faster acquisition via undersampling of data can improve the spatial-temporal resolution trade-off and increase statistical robustness through increased degrees-of-freedom. High quality reconstruction of fMRI data from undersampled measurements requires proper modeling of the data. We present an fMRI reconstruction approach based on modeling the fMRI signal as a sum of periodic and fixed rank components, for improved reconstruction from undersampled measurements. We decompose the fMRI signal into a component which a has fixed rank and a component consisting of a sum of periodic signals which is sparse in the temporal Fourier domain. Data reconstruction is performed by solving a constrained problem that enforces a fixed, moderate rank on one of the components, and a limited number of temporal frequencies on the other. Our approach is coined PEAR - PEriodic And fixed Rank separation for fast fMRI. Experimental results include purely synthetic simulation, a simulation with real timecourses and retrospective undersampling of a real fMRI dataset. Evaluation was performed both quantitatively and visually versus ground truth, comparing PEAR to two additional recent methods for fMRI reconstruction from undersampled measurements. Results demonstrate PEAR's improvement in estimating the timecourses and activation maps versus the methods compared against at acceleration ratios of R=8,16 (for simulated data) and R=6.66,10 (for real data). PEAR results in reconstruction with higher fidelity than when using a fixed-rank based model or a conventional Low-rank+Sparse algorithm. We have shown that splitting the functional information between the components leads to better modeling of fMRI, over state-of-the-art methods