1,340 research outputs found
On Interpretability of Deep Learning based Skin Lesion Classifiers using Concept Activation Vectors
Deep learning based medical image classifiers have shown remarkable prowess
in various application areas like ophthalmology, dermatology, pathology, and
radiology. However, the acceptance of these Computer-Aided Diagnosis (CAD)
systems in real clinical setups is severely limited primarily because their
decision-making process remains largely obscure. This work aims at elucidating
a deep learning based medical image classifier by verifying that the model
learns and utilizes similar disease-related concepts as described and employed
by dermatologists. We used a well-trained and high performing neural network
developed by REasoning for COmplex Data (RECOD) Lab for classification of three
skin tumours, i.e. Melanocytic Naevi, Melanoma and Seborrheic Keratosis and
performed a detailed analysis on its latent space. Two well established and
publicly available skin disease datasets, PH2 and derm7pt, are used for
experimentation. Human understandable concepts are mapped to RECOD image
classification model with the help of Concept Activation Vectors (CAVs),
introducing a novel training and significance testing paradigm for CAVs. Our
results on an independent evaluation set clearly shows that the classifier
learns and encodes human understandable concepts in its latent representation.
Additionally, TCAV scores (Testing with CAVs) suggest that the neural network
indeed makes use of disease-related concepts in the correct way when making
predictions. We anticipate that this work can not only increase confidence of
medical practitioners on CAD but also serve as a stepping stone for further
development of CAV-based neural network interpretation methods.Comment: Accepted for the IEEE International Joint Conference on Neural
Networks (IJCNN) 202
A Non-Invasive Interpretable Diagnosis of Melanoma Skin Cancer Using Deep Learning and Ensemble Stacking of Machine Learning Models
A skin lesion is a portion of skin that observes abnormal growth compared to other areas of the skin. The ISIC 2018 lesion dataset has seven classes. A miniature dataset version of it is also available with only two classes: malignant and benign. Malignant tumors are tumors that are cancerous, and benign tumors are non-cancerous. Malignant tumors have the ability to multiply and spread throughout the body at a much faster rate. The early detection of the cancerous skin lesion is crucial for the survival of the patient. Deep learning models and machine learning models play an essential role in the detection of skin lesions. Still, due to image occlusions and imbalanced datasets, the accuracies have been compromised so far. In this paper, we introduce an interpretable method for the non-invasive diagnosis of melanoma skin cancer using deep learning and ensemble stacking of machine learning models. The dataset used to train the classifier models contains balanced images of benign and malignant skin moles. Hand-crafted features are used to train the base models (logistic regression, SVM, random forest, KNN, and gradient boosting machine) of machine learning. The prediction of these base models was used to train level one model stacking using cross-validation on the training set. Deep learning models (MobileNet, Xception, ResNet50, ResNet50V2, and DenseNet121) were used for transfer learning, and were already pre-trained on ImageNet data. The classifier was evaluated for each model. The deep learning models were then ensembled with different combinations of models and assessed. Furthermore, shapely adaptive explanations are used to construct an interpretability approach that generates heatmaps to identify the parts of an image that are most suggestive of the illness. This allows dermatologists to understand the results of our model in a way that makes sense to them. For evaluation, we calculated the accuracy, F1-score, Cohen\u27s kappa, confusion matrix, and ROC curves and identified the best model for classifying skin lesions
Coherent Concept-based Explanations in Medical Image and Its Application to Skin Lesion Diagnosis
Early detection of melanoma is crucial for preventing severe complications
and increasing the chances of successful treatment. Existing deep learning
approaches for melanoma skin lesion diagnosis are deemed black-box models, as
they omit the rationale behind the model prediction, compromising the
trustworthiness and acceptability of these diagnostic methods. Attempts to
provide concept-based explanations are based on post-hoc approaches, which
depend on an additional model to derive interpretations. In this paper, we
propose an inherently interpretable framework to improve the interpretability
of concept-based models by incorporating a hard attention mechanism and a
coherence loss term to assure the visual coherence of concept activations by
the concept encoder, without requiring the supervision of additional
annotations. The proposed framework explains its decision in terms of
human-interpretable concepts and their respective contribution to the final
prediction, as well as a visual interpretation of the locations where the
concept is present in the image. Experiments on skin image datasets demonstrate
that our method outperforms existing black-box and concept-based models for
skin lesion classification.Comment: Under IEEE Copyright. Accepted for publication at CVPR 2023 Workshop
Safe Artificial Intelligence for Automated Driving (SAIAD
Explainable artificial intelligence (XAI) in deep learning-based medical image analysis
With an increase in deep learning-based methods, the call for explainability
of such methods grows, especially in high-stakes decision making areas such as
medical image analysis. This survey presents an overview of eXplainable
Artificial Intelligence (XAI) used in deep learning-based medical image
analysis. A framework of XAI criteria is introduced to classify deep
learning-based medical image analysis methods. Papers on XAI techniques in
medical image analysis are then surveyed and categorized according to the
framework and according to anatomical location. The paper concludes with an
outlook of future opportunities for XAI in medical image analysis.Comment: Submitted for publication. Comments welcome by email to first autho
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