Homomorphisms are a good basis for counting small subgraphs

We introduce graph motif parameters, a class of graph parameters that depend only on the frequencies of constant-size induced subgraphs. Classical works by Lov\'asz show that many interesting quantities have this form, including, for fixed graphs $H$, the number of $H$-copies (induced or not) in an input graph $G$, and the number of homomorphisms from $H$ to $G$. Using the framework of graph motif parameters, we obtain faster algorithms for counting subgraph copies of fixed graphs $H$ in host graphs $G$: For graphs $H$ on $k$ edges, we show how to count subgraph copies of $H$ in time $k^{O(k)}\cdot n^{0.174k + o(k)}$ by a surprisingly simple algorithm. This improves upon previously known running times, such as $O(n^{0.91k + c})$ time for $k$-edge matchings or $O(n^{0.46k + c})$ time for $k$-cycles. Furthermore, we prove a general complexity dichotomy for evaluating graph motif parameters: Given a class $\mathcal C$ of such parameters, we consider the problem of evaluating $f\in \mathcal C$ on input graphs $G$, parameterized by the number of induced subgraphs that $f$ depends upon. For every recursively enumerable class $\mathcal C$, we prove the above problem to be either FPT or #W[1]-hard, with an explicit dichotomy criterion. This allows us to recover known dichotomies for counting subgraphs, induced subgraphs, and homomorphisms in a uniform and simplified way, together with improved lower bounds. Finally, we extend graph motif parameters to colored subgraphs and prove a complexity trichotomy: For vertex-colored graphs $H$ and $G$, where $H$ is from a fixed class $\mathcal H$, we want to count color-preserving $H$-copies in $G$. We show that this problem is either polynomial-time solvable or FPT or #W[1]-hard, and that the FPT cases indeed need FPT time under reasonable assumptions.Comment: An extended abstract of this paper appears at STOC 201

The Complexity of Counting Homomorphisms to Cactus Graphs Modulo 2

A homomorphism from a graph G to a graph H is a function from V(G) to V(H) that preserves edges. Many combinatorial structures that arise in mathematics and computer science can be represented naturally as graph homomorphisms and as weighted sums of graph homomorphisms. In this paper, we study the complexity of counting homomorphisms modulo 2. The complexity of modular counting was introduced by Papadimitriou and Zachos and it has been pioneered by Valiant who famously introduced a problem for which counting modulo 7 is easy but counting modulo 2 is intractable. Modular counting provides a rich setting in which to study the structure of homomorphism problems. In this case, the structure of the graph H has a big influence on the complexity of the problem. Thus, our approach is graph-theoretic. We give a complete solution for the class of cactus graphs, which are connected graphs in which every edge belongs to at most one cycle. Cactus graphs arise in many applications such as the modelling of wireless sensor networks and the comparison of genomes. We show that, for some cactus graphs H, counting homomorphisms to H modulo 2 can be done in polynomial time. For every other fixed cactus graph H, the problem is complete for the complexity class parity-P which is a wide complexity class to which every problem in the polynomial hierarchy can be reduced (using randomised reductions). Determining which H lead to tractable problems can be done in polynomial time. Our result builds upon the work of Faben and Jerrum, who gave a dichotomy for the case in which H is a tree.Comment: minor change

The Complexity of Approximately Counting Tree Homomorphisms

We study two computational problems, parameterised by a fixed tree H. #HomsTo(H) is the problem of counting homomorphisms from an input graph G to H. #WHomsTo(H) is the problem of counting weighted homomorphisms to H, given an input graph G and a weight function for each vertex v of G. Even though H is a tree, these problems turn out to be sufficiently rich to capture all of the known approximation behaviour in #P. We give a complete trichotomy for #WHomsTo(H). If H is a star then #WHomsTo(H) is in FP. If H is not a star but it does not contain a certain induced subgraph J_3 then #WHomsTo(H) is equivalent under approximation-preserving (AP) reductions to #BIS, the problem of counting independent sets in a bipartite graph. This problem is complete for the class #RHPi_1 under AP-reductions. Finally, if H contains an induced J_3 then #WHomsTo(H) is equivalent under AP-reductions to #SAT, the problem of counting satisfying assignments to a CNF Boolean formula. Thus, #WHomsTo(H) is complete for #P under AP-reductions. The results are similar for #HomsTo(H) except that a rich structure emerges if H contains an induced J_3. We show that there are trees H for which #HomsTo(H) is #SAT-equivalent (disproving a plausible conjecture of Kelk). There is an interesting connection between these homomorphism-counting problems and the problem of approximating the partition function of the ferromagnetic Potts model. In particular, we show that for a family of graphs J_q, parameterised by a positive integer q, the problem #HomsTo(H) is AP-interreducible with the problem of approximating the partition function of the q-state Potts model. It was not previously known that the Potts model had a homomorphism-counting interpretation. We use this connection to obtain some additional upper bounds for the approximation complexity of #HomsTo(J_q)

The Logic of Counting Query Answers

We consider the problem of counting the number of answers to a first-order formula on a finite structure. We present and study an extension of first-order logic in which algorithms for this counting problem can be naturally and conveniently expressed, in senses that are made precise and that are motivated by the wish to understand tractable cases of the counting problem