233 research outputs found
Learning Tasks for Multitask Learning: Heterogenous Patient Populations in the ICU
Machine learning approaches have been effective in predicting adverse
outcomes in different clinical settings. These models are often developed and
evaluated on datasets with heterogeneous patient populations. However, good
predictive performance on the aggregate population does not imply good
performance for specific groups.
In this work, we present a two-step framework to 1) learn relevant patient
subgroups, and 2) predict an outcome for separate patient populations in a
multi-task framework, where each population is a separate task. We demonstrate
how to discover relevant groups in an unsupervised way with a
sequence-to-sequence autoencoder. We show that using these groups in a
multi-task framework leads to better predictive performance of in-hospital
mortality both across groups and overall. We also highlight the need for more
granular evaluation of performance when dealing with heterogeneous populations.Comment: KDD 201
Unsupervised patient representations from clinical notes with interpretable classification decisions
We have two main contributions in this work: 1. We explore the usage of a
stacked denoising autoencoder, and a paragraph vector model to learn
task-independent dense patient representations directly from clinical notes. We
evaluate these representations by using them as features in multiple supervised
setups, and compare their performance with those of sparse representations. 2.
To understand and interpret the representations, we explore the best encoded
features within the patient representations obtained from the autoencoder
model. Further, we calculate the significance of the input features of the
trained classifiers when we use these pretrained representations as input.Comment: Accepted poster at NIPS 2017 Workshop on Machine Learning for Health
(https://ml4health.github.io/2017/
Processing of Electronic Health Records using Deep Learning: A review
Availability of large amount of clinical data is opening up new research
avenues in a number of fields. An exciting field in this respect is healthcare,
where secondary use of healthcare data is beginning to revolutionize
healthcare. Except for availability of Big Data, both medical data from
healthcare institutions (such as EMR data) and data generated from health and
wellbeing devices (such as personal trackers), a significant contribution to
this trend is also being made by recent advances on machine learning,
specifically deep learning algorithms
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